ClickHouse/utils/backupview/clickhouse_backupview.py

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#!/usr/bin/env python3
import bisect
import os.path
2024-09-27 10:19:39 +00:00
import shutil
import xml.etree.ElementTree as ET
2024-09-27 10:19:39 +00:00
import zipfile # For reading backups from zip archives
from urllib.parse import urlparse
import boto3 # For reading backups from S3
import botocore
## Examples:
## from backupview import open_backup
##
## Get information about the backup's contents:
## backup = open_backup("/path/to/backup/")
## print(backup.get_databases()))
## for database in backup.get_databases():
## print(backup.get_create_query(database=database))
## for table in backup.get_tables(database=database):
## print(backup.get_create_query(database=database, table=table))
## print(backup.get_partitions(database=database, table=table))
## print(backup.get_parts(database=database, table=table))
##
## Extract everything from the backup to a folder:
## backup.extract_all(out="/where/to/extract/1/")
##
## Extract the data of a single table:
## backup.extract_table_data(database="mydb", table="mytable", out="/where/to/extract/2/")
## backup.extract_table_data(table="mydb.mytable", part="all_1_1", out="/where/to/extract/3/")
## backup.extract_table_data(database="mydb", table="mytable", partition="2022", out="/where/to/extract/4/")
## backup.extract_table_metadata(table=('mydb', 'mytable'), out="/where/to/extract/5.sql")
##
## Get a list of all files in the backup:
## print(backup.get_files())
##
## Get information about files in the backup:
## print(backup.get_file_infos())
##
## Extract files to a folder:
## backup.extract_dir("/shards/1/replicas/1/", out="/where/to/extract/6/")
## backup.extract_file("/shards/1/replicas/1/metadata/mydb/mytable.sql", out="/where/to/extract/7.sql")
##
## Reading from S3:
## backup = open_backup(S3("uri", "access_key_id", "secret_access_key"))
## backup.extract_table_data(table="mydb.mytable", partition="2022", out="/where/to/extract/8/")
# Opens a backup for viewing.
def open_backup(backup_name, base_backup=None):
return Backup(backup_name, base_backup=base_backup)
# Main class, an instance of Backup is returned by the open_backup() function.
class Backup:
def __init__(self, backup_name, base_backup=None):
self.__location = None
self.__close_base_backup = False
self.__base_backup = base_backup
self.__reader = None
try:
self.__location = Location(backup_name)
if TypeChecks.is_location_like(base_backup):
self.__base_backup = Location(base_backup)
self.__reader = self.__location.create_reader()
self.__parse_backup_metadata()
except:
self.close()
raise
def close(self):
if self.__reader is not None:
self.__reader.close()
self.__reader = None
if (
(self.__base_backup is not None)
and (not TypeChecks.is_location_like(self.__base_backup))
and self.__close_base_backup
):
self.__base_backup.close()
self.__base_backup = None
def __enter__(self):
return self
def __exit__(self, exc_type, exc_value, traceback):
self.close()
# Get general information about the backup.
# Returns the name of the backup, e.g. File('/path/to/backup/')
def get_name(self):
return str(self.get_location())
def get_location(self):
return self.__location
def __repr__(self):
return "Backup(" + repr(self.get_location()) + ")"
# Returns the base backup or None if there is no base backup.
def get_base_backup(self):
if TypeChecks.is_location_like(self.__base_backup):
self.__close_base_backup = True
self.__base_backup = open_backup(self.__base_backup)
return self.__base_backup
def get_base_backup_location(self):
if self.__base_backup is None:
return None
if TypeChecks.is_location_like(self.__base_backup):
return self.__base_backup
return self.__base_backup.get_location()
def get_base_backup_name(self):
if self.__base_backup is None:
return None
return str(self.get_base_backup_location())
# Returns the version of the backup.
def get_version(self):
return self.__version
# Returns the timestamp of the backup.
def get_timestamp(self):
return self.__timestamp
# Get high-level information about the contents of the backup.
# Returns shards stored in the backup.
def get_shards(self):
if self.dir_exists("/shards/"):
return self.get_subdirs("/shards/")
return ["1"]
# Returns replicas stored in the backup.
def get_replicas(self, shard="1"):
if self.dir_exists(f"/shards/{shard}/replicas/"):
return self.get_subdirs(f"/shards/{shard}/replicas/")
elif self.dir_exists("/replicas/"):
return self.get_subdirs("/replicas/")
else:
return ["1"]
# Returns databases stored in the backup.
def get_databases(self, shard="1", replica="1"):
res = []
for path in self.__get_paths_in_backup(shard=shard, replica=replica):
dir = path + "metadata/"
if self.dir_exists(dir):
files = self.get_files_in_dir(dir)
subdirs = self.get_subdirs(dir)
res += [Backup.__unescape_for_filename(name) for name in subdirs]
res += [
Backup.__unescape_for_filename(os.path.splitext(name)[0])
for name in files
if name.endswith(".sql")
]
return sorted(set(res))
# Returns tables stored in the backup.
# b.get_tables(database='mydb') returns the names of tables in that database 'mydb';
# b.get_tables() returns a list of tuples (db, table) for all tables in the backup.
def get_tables(self, database=None, shard="1", replica="1"):
if database is None:
databases = self.get_databases(shard=shard, replica=replica)
else:
databases = [database]
res = []
paths = self.__get_paths_in_backup(shard=shard, replica=replica)
for path in paths:
if self.dir_exists(f"{path}metadata/"):
for db in databases:
dir = path + "metadata/" + Backup.__escape_for_filename(db) + "/"
if self.dir_exists(dir):
files = self.get_files_in_dir(dir)
tables = [
Backup.__unescape_for_filename(os.path.splitext(name)[0])
for name in files
if name.endswith(".sql")
]
if database is None:
tables = [(db, table) for table in tables]
res += tables
return sorted(set(res))
# Returns the create query of a table or a database.
# The function can return None if there is no create query in the backup for such table or database.
# b.get_create_query(database='mydb') returns the create query of the database `mydb`;
# b.get_create_query(database='mydb', table='mytable') returns the create query of the table `mydb`.`mytable`;
# b.get_create_query(table='mydb.mytable') and b.get_create_query(table=('mydb', 'mytable')) also returns the create query of the table `mydb`.`mytable`.
def get_create_query(self, table=None, database=None, shard="1", replica="1"):
path = self.get_create_query_path(
table=table, database=database, shard=shard, replica=replica
)
if path is None:
return None
return self.read_file(path).decode("utf-8")
def get_table_metadata(self, table, database=None, shard="1", replica="1"):
return self.get_create_query(
table=table, database=database, shard=shard, replica=replica
)
def get_database_metadata(self, database, shard="1", replica="1"):
return self.get_create_query(database=database, shard=shard, replica=replica)
# Like get_create_query(), but returns the path to the corresponding file containing the create query in the backup.
def get_create_query_path(self, table=None, database=None, shard="1", replica="1"):
if database is None:
database, table = Backup.__split_database_table(table)
if table is None:
suffix = "metadata/" + Backup.__escape_for_filename(database) + ".sql"
else:
suffix = (
"metadata/"
+ Backup.__escape_for_filename(database)
+ "/"
+ Backup.__escape_for_filename(table)
+ ".sql"
)
for path in self.__get_paths_in_backup(shard=shard, replica=replica):
metadata_path = path + suffix
if self.file_exists(metadata_path):
return metadata_path
return None
def get_table_metadata_path(self, table, database=None, shard="1", replica="1"):
return self.get_create_query_path(
table=table, database=database, shard=shard, replica=replica
)
def get_database_metadata_path(self, database, shard="1", replica="1"):
return self.get_create_query_path(
database=database, shard=shard, replica=replica
)
# Returns the names of parts of a specified table.
# If the 'partition' parameter is specified, the function returns only parts related to that partition.
# The table can be specified either as b.get_parts(database='mydb', table='mytable') or
# b.get_parts(table='mydb.mytable') or b.get_parts(table=('mydb', 'mytable')).
def get_parts(self, table, database=None, partition=None, shard="1", replica="1"):
data_path = self.get_table_data_path(
table=table, database=database, shard=shard, replica=replica
)
if data_path is None:
return []
part_names = self.get_subdirs(data_path)
if "mutations" in part_names:
part_names.remove("mutations")
if partition is not None:
part_names = [
part_name
for part_name in part_names
if Backup.__extract_partition_id_from_part_name(part_name) == partition
]
return part_names
# Returns the names of partitions of a specified table.
# The table can be specified either as b.get_partitions(database='mydb', table='mytable') or
# b.get_partitions(table='mydb.mytable') or b.get_partitions(table=('mydb', 'mytable'))
def get_partitions(self, table, database=None, shard="1", replica="1"):
parts = self.get_parts(
table=table, database=database, shard=shard, replica=replica
)
partitions = []
prev_partition = None
for part in parts:
partition = Backup.__extract_partition_id_from_part_name(part)
if partition != prev_partition:
partitions.append(partition)
prev_partition = partition
return partitions
# Returns the path to the 'data' folder of a specified table in the backup.
# The function can return None if there is no such folder in the backup.
# The table can be specified either as b.get_table_data_path(database='mydb', table='mytable')
# b.get_table_data_path(table='mydb.mytable') or b.get_table_data_path(table=('mydb', 'mytable'))
def get_table_data_path(self, table, database=None, shard="1", replica="1"):
if database is None:
database, table = Backup.__split_database_table(table)
suffix = (
"metadata/"
+ Backup.__escape_for_filename(database)
+ "/"
+ Backup.__escape_for_filename(table)
+ ".sql"
)
for path in self.__get_paths_in_backup(shard=shard, replica=replica):
if self.file_exists(path + suffix):
data_path = (
path
+ "data/"
+ Backup.__escape_for_filename(database)
+ "/"
+ Backup.__escape_for_filename(table)
+ "/"
)
return data_path if self.dir_exists(data_path) else None
return None
# Returns the paths to files in the 'data' folder of a specified table in the backup.
# If any of the parameters 'part' and 'partition' is specified the function returns only the files related to that part or partition.
# The table can be specified either as b.get_table_data_files(database='mydb', table='mytable')
# b.get_table_data_files(table='mydb.mytable') or b.get_table_data_files(table=('mydb', 'mytable'))
def get_table_data_files(
self, table, database=None, part=None, partition=None, shard="1", replica="1"
):
data_path = self.get_table_data_path(
table=table, database=database, shard=shard, replica=replica
)
if data_path is None:
return []
if (part is not None) and (partition is not None):
raise Exception(
"get_table_data_files: `only_part` and `only_partition` cannot be set together"
)
files = []
if part is not None:
files = self.get_files_in_dir(os.path.join(data_path, part), recursive=True)
elif partition is not None:
for part in self.get_parts(
table=table,
database=database,
partition=partition,
shard=shard,
replica=replica,
):
files += self.get_files_in_dir(
os.path.join(data_path, part), recursive=True
)
else:
files = self.get_files_in_dir(data_path, recursive=True)
return [data_path + file for file in files]
# Extracts the create query of a table or a database to a specified destination.
# The function returns a tuple (files_extracted, bytes_extracted).
# The function does nothing if there is no create query for such table or database in the backup.
def extract_create_query(
self, table=None, database=None, shard="1", replica="1", out=None, out_path=""
):
file = self.get_create_query_path(
table=table, database=database, shard=shard, replica=replica
)
if file is None:
return (0, 0)
return self.extract_file(path=file, out=out, out_path=out_path)
def extract_table_metadata(
self, table, database=None, shard="1", replica="1", out=None, out_path=""
):
return self.extract_create_query(
table=table,
database=database,
shard=shard,
replica=replica,
out=out,
out_path=out_path,
)
def extract_database_metadata(
self, database, shard="1", replica="1", out=None, out_path=""
):
return self.extract_create_query(
database=database, shard=shard, replica=replica, out=out, out_path=out_path
)
# Extracts the data of a table or a database to a specified destination.
# The function returns a tuple (files_extracted, bytes_extracted).
# The function does nothing if there is no data for such table in the backup.
def extract_table_data(
self,
table,
database=None,
part=None,
partition=None,
shard="1",
replica="1",
out=None,
out_path="",
):
files = self.get_table_data_files(
table=table,
database=database,
part=part,
partition=partition,
shard=shard,
replica=replica,
)
data_path = self.get_table_data_path(
table=table, database=database, shard=shard, replica=replica
)
return self.extract_files(
path=data_path,
files=Backup.__remove_prefix_path(files, data_path),
out=out,
out_path=out_path,
)
# Get low-level information about files in the backup.
# Returns a list of all files in the backup.
def get_files(self):
return self.get_files_in_dir(path="/", recursive=True)
# Returns True if a specified file exists in the backup.
def file_exists(self, path):
if not path.startswith("/"):
path = "/" + path
return path in self.__file_infos
# Returns True if a specified folder exists in the backup.
def dir_exists(self, path):
if not path.startswith("/"):
path = "/" + path
if not path.endswith("/"):
path += "/"
if path == "/":
return True
pos = bisect.bisect_left(self.__file_paths, path)
return (pos < len(self.__file_paths)) and self.__file_paths[pos].startswith(
path
)
# Returns the size of a file in the backup.
# The function raises an exception of the file doesn't exist.
def get_file_size(self, path):
fi = self.get_file_info(path)
return fi.size
# Returns the information about a file in the backup.
# The function raises an exception of the file doesn't exist.
def get_file_info(self, path):
if not path.startswith("/"):
path = "/" + path
fi = self.__file_infos.get(path)
if fi is None:
raise Exception(f"File {path} not found in backup {self}")
return fi
# Returns the information about multiple or all files files in the backup.
def get_file_infos(self, paths=None):
if paths is None:
return self.__file_infos.values()
return [self.get_file_info(path) for path in paths]
# Finds the information about a file in the backup by its checksum.
# The function raises an exception of the file doesn't exist.
def get_file_info_by_checksum(self, checksum):
fi = self.__file_infos_by_checksum.get(checksum)
if fi is None:
raise Exception(f"File with checksum={checksum} not found in backup {self}")
return fi
# Returns all files in a directory inside the backup.
def get_files_in_dir(self, path, recursive=False):
if not path.startswith("/"):
path = "/" + path
if not path.endswith("/"):
path += "/"
if path == "/" and recursive:
return self.__file_paths
pos = bisect.bisect_left(self.__file_paths, path)
files = []
while pos < len(self.__file_paths):
file = self.__file_paths[pos]
if not file.startswith(path):
break
file = file[len(path) :]
if recursive or (file.find("/") == -1):
files.append(file)
pos += 1
return files
# Returns all subdirectories in a directory inside the backup.
def get_subdirs(self, path):
if not path.startswith("/"):
path = "/" + path
if not path.endswith("/"):
path += "/"
pos = bisect.bisect_left(self.__file_paths, path)
subdirs = []
prev_subdir = ""
while pos < len(self.__file_paths):
file = self.__file_paths[pos]
if not file.startswith(path):
break
file = file[len(path) :]
sep = file.find("/")
if sep != -1:
subdir = file[:sep]
if subdir != prev_subdir:
subdirs.append(subdir)
prev_subdir = subdir
pos += 1
return subdirs
# Opens a file for reading from the backup.
def open_file(self, path):
fi = self.get_file_info(path)
if fi.size == 0:
return EmptyFileObj()
elif fi.base_size == 0:
return self.__reader.open_file(fi.data_file)
elif fi.size == fi.base_size:
base_fi = self.get_base_backup().get_file_info_by_checksum(fi.base_checksum)
return self.get_base_backup().open_file(base_fi.name)
else:
base_fi = self.get_base_backup().get_file_info_by_checksum(fi.base_checksum)
base_stream = self.get_base_backup().open_file(base_fi.name)
stream = self.__reader.open_file(fi.data_file)
return ConcatFileObj(base_stream, stream)
# Reads a file and returns its contents.
def read_file(self, path):
fi = self.get_file_info(path)
if fi.size == 0:
return b""
elif fi.base_size == 0:
return self.__reader.read_file(fi.data_file)
elif fi.size == fi.base_size:
base_fi = self.get_base_backup().get_file_info_by_checksum(fi.base_checksum)
return self.get_base_backup().read_file(base_fi.name)
else:
base_fi = self.get_base_backup().get_file_info_by_checksum(fi.base_checksum)
return self.get_base_backup().read_file(
base_fi.name
) + self.__reader.read_file(fi.data_file)
# Extracts a file from the backup to a specified destination.
def extract_file(self, path, out=None, out_path="", make_dirs=True):
if (out is None) and (len(out_path) > 0):
return self.extract_file(path, out=out_path, make_dirs=make_dirs)
if TypeChecks.is_file_opened_for_writing(out):
ostream = out
fi = self.get_file_info(path)
with self.open_file(path) as istream:
shutil.copyfileobj(istream, ostream)
return ExtractionInfo(num_files=1, num_bytes=fi.size)
if TypeChecks.is_location_like(out):
with Location(out).create_writer() as writer:
return self.extract_file(
path, out=writer, out_path=out_path, make_dirs=make_dirs
)
TypeChecks.check_is_writer(out)
writer = out
fi = self.get_file_info(path)
if make_dirs:
sep = out_path.rfind("/")
if sep != -1:
subdir = out_path[: sep + 1]
writer.make_dirs(subdir)
if fi.size == 0:
writer.create_empty_file(out_path)
elif fi.base_size == 0:
self.__reader.extract_file(fi.data_file, writer=writer, out_path=out_path)
elif fi.size == fi.base_size:
base_fi = self.get_base_backup().get_file_info_by_checksum(fi.base_checksum)
self.get_base_backup().extract_file(
path=base_fi.name, out=writer, out_path=out_path
)
else:
with self.open_file(path) as istream:
with writer.open_file(out_path) as ostream:
shutil.copyfileobj(istream, ostream)
return ExtractionInfo(num_files=1, num_bytes=fi.size)
# Extracts multiple files from the backup to a specified destination.
def extract_files(self, path, files, out=None, out_path=""):
if (out is None) and (len(out_path) > 0):
return self.extract_files(path, files, out=out_path)
if TypeChecks.is_location_like(out):
with Location(out).create_writer() as writer:
return self.extract_files(path, files, out=writer, out_path=out_path)
TypeChecks.check_is_writer(out)
writer = out
subdirs = set()
for file in files:
sep = file.rfind("/")
if sep != -1:
subdirs.add(file[: sep + 1])
for subdir in subdirs:
writer.make_dirs(os.path.join(out_path, subdir))
extracted_files_info = ExtractionInfo()
for file in files:
extracted_files_info.add(
self.extract_file(
os.path.join(path, file),
out=writer,
out_path=os.path.join(out_path, file),
make_dirs=False,
)
)
return extracted_files_info
def extract_dir(self, path, out=None, out_path=""):
files = self.get_files_in_dir(path, recursive=True)
return self.extract_files(path=path, files=files, out=out, out_path=out_path)
def extract_all(self, out=None, out_path=""):
return self.extract_dir("/", out=out, out_path=out_path)
# Checks that all files in the backup exist and have the expected sizes.
def check_files(self):
data_files = {}
for fi in self.__file_infos.values():
if fi.size > fi.base_size:
data_file = fi.data_file
if data_file in data_files:
prev_fi = data_files[data_file]
if (
(fi.size != prev_fi.size)
or (fi.checksum != prev_fi.checksum)
or (fi.use_base != prev_fi.use_base)
or (fi.base_size != prev_fi.base_size)
or (fi.base_checksum != prev_fi.base_checksum)
or (fi.encrypted_by_disk != prev_fi.encrypted_by_disk)
):
raise Exception(
f"Files {prev_fi.name} and {fi.name} uses the same data file but their file infos are different: {prev_fi} and {fi}, backup: {self}"
)
else:
data_files[data_file] = fi
if fi.base_size > 0:
fi_base = self.get_base_backup().get_file_info_by_checksum(
fi.base_checksum
)
if fi.base_size != fi_base.size:
raise Exception(
f"Size of file {fi_base.name} in the base backup is different ({fi.base_size} != {fi_base.size}) "
f"from it's base size in this backup, backup={self}, base_backup={self.get_base_backup()}"
)
if fi.size < fi_base.size:
raise Exception(
f"File {fi.name} has a smaller size ({fi.size} < {fi_base.size}) than the size of a corresponding file {fi_base.name} "
f"in the base backup, backup={self}, base_backup={self.get_base_backup()}"
)
for fi in data_files.values():
if not self.__reader.file_exists(fi.data_file):
raise Exception(
f"File {fi.data_file} must exist but not found inside backup {self} "
)
actual_size = self.__reader.get_file_size(fi.data_file)
expected_size = fi.size - fi.base_size
if actual_size != expected_size:
raise Exception(
f"File {fi.data_file} has unexpected size {actual_size} != {expected_size} inside backup {self}"
)
if self.get_base_backup() is not None:
self.get_base_backup().check_files()
def __parse_backup_metadata(self):
metadata_str = self.__reader.read_file(".backup")
xmlroot = ET.fromstring(metadata_str)
version_node = xmlroot.find("version")
self.__version = int(version_node.text) if (version_node is not None) else None
timestamp_node = xmlroot.find("timestamp")
self.__timestamp = timestamp_node.text if (timestamp_node is not None) else None
if self.__base_backup is None:
base_backup_node = xmlroot.find("base_backup")
if base_backup_node is not None:
self.__base_backup = Location(base_backup_node.text)
self.__file_infos = {}
self.__file_infos_by_checksum = {}
self.__file_paths = []
contents = xmlroot.find("contents")
for file in contents:
name = file.find("name").text
if not name.startswith("/"):
name = "/" + name
fi = FileInfo(name)
fi.size = int(file.find("size").text)
if fi.size != 0:
checksum_node = file.find("checksum")
fi.checksum = checksum_node.text
encrypted_by_disk_node = file.find("encrypted_by_disk")
if encrypted_by_disk_node is not None:
fi.encrypted_by_disk = encrypted_by_disk_node.text == "true"
base_size_node = file.find("base_size")
if base_size_node is not None:
fi.base_size = int(base_size_node.text)
else:
use_base_node = file.find("use_base")
if (use_base_node is not None) and (use_base_node.text == "true"):
fi.base_size = fi.size
if fi.base_size > 0:
fi.use_base = True
if fi.use_base:
if fi.base_size == fi.size:
fi.base_checksum = fi.checksum
else:
base_checksum_node = file.find("base_checksum")
fi.base_checksum = base_checksum_node.text
if fi.size > fi.base_size:
data_file_node = file.find("data_file")
data_file = (
data_file_node.text if (data_file_node is not None) else fi.name
)
if not data_file.startswith("/"):
data_file = "/" + data_file
fi.data_file = data_file
self.__file_infos[fi.name] = fi
if fi.size > 0:
self.__file_infos_by_checksum[fi.checksum] = fi
self.__file_paths.append(fi.name)
metadata_fi = FileInfo("/.backup")
metadata_fi.size = len(metadata_str)
metadata_fi.data_file = metadata_fi.name
self.__file_infos[metadata_fi.name] = metadata_fi
self.__file_paths.append(metadata_fi.name)
self.__file_paths.sort()
def __get_paths_in_backup(self, shard, replica):
paths = []
if self.dir_exists(f"/shards/{shard}/replicas/{replica}/metadata/"):
paths.append(f"/shards/{shard}/replicas/{replica}/")
if self.dir_exists(f"/shards/{shard}metadata/"):
paths.append(f"/shards/{shard}/")
if self.dir_exists(f"/replicas/{replica}/metadata/"):
paths.append(f"/replicas/{replica}/")
if self.dir_exists(f"/metadata/"):
paths.append(f"/")
return paths
def __split_database_table(table):
if isinstance(table, tuple):
return table[0], table[1]
elif isinstance(table, str) and (table.find(".") != -1):
return table.split(".", maxsplit=1)
def __remove_prefix_path(files, prefix_path):
for file in files:
if not file.startswith(prefix_path):
raise Exception(
f"remove_prefix_path: File '{file}' doesn't have the expected prefix '{prefix_path}'"
)
return [file[len(prefix_path) :] for file in files]
def __escape_for_filename(text):
res = ""
for c in text:
if (c.isascii() and c.isalnum()) or c == "_":
res += c
else:
for b in c.encode("utf-8"):
res += f"%{b:X}"
return res
def __unescape_for_filename(text):
res = b""
i = 0
while i < len(text):
c = text[i]
if c == "%" and i + 2 < len(text):
res += bytes.fromhex(text[i + 1 : i + 3])
i += 3
else:
res += c.encode("ascii")
i += 1
return res.decode("utf-8")
def __extract_partition_id_from_part_name(part_name):
underscore = part_name.find("_")
if underscore <= 0:
return None
return part_name[:underscore]
# Information about a single file inside a backup.
class FileInfo:
def __init__(
self,
name,
size=0,
checksum="00000000000000000000000000000000",
data_file="",
use_base=False,
base_size=0,
base_checksum="00000000000000000000000000000000",
encrypted_by_disk=False,
):
self.name = name
self.size = size
self.checksum = checksum
self.data_file = data_file
self.use_base = use_base
self.base_size = base_size
self.base_checksum = base_checksum
self.encrypted_by_disk = encrypted_by_disk
def __repr__(self):
res = "FileInfo("
res += f"name='{self.name}'"
res += f", size={self.size}"
if self.checksum != "00000000000000000000000000000000":
res += f", checksum='{self.checksum}'"
if self.data_file:
res += f", data_file='{self.data_file}'"
if self.use_base:
res += f", use_base={self.use_base}"
res += f", base_size={self.base_size}"
res += f", base_checksum='{self.base_checksum}'"
if self.encrypted_by_disk:
res += f", encrypted_by_disk={self.encrypted_by_disk}"
res += ")"
return res
def __eq__(self, other):
if not isinstance(other, FileInfo):
return False
return (
(self.name == other.name)
and (self.size == other.size)
and (self.checksum == other.checksum)
and (self.data_file == other.data_file)
and (self.use_base == other.use_base)
and (self.base_size == other.base_size)
and (self.base_checksum == other.base_checksum)
and (self.encrypted_by_disk == other.encrypted_by_disk)
)
# Information about extracted files.
class ExtractionInfo:
def __init__(self, num_files=0, num_bytes=0):
self.num_files = num_files
self.num_bytes = num_bytes
def __repr__(self):
return f"ExtractionInfo(num_files={self.num_files}, num_bytes={self.num_bytes})"
def __eq__(self, other):
if not isinstance(other, ExtractionInfo):
return False
return self.num_files == other.num_files and self.num_bytes == other.num_bytes
def add(self, other):
self.num_files += other.num_files
self.num_bytes += other.num_bytes
# File('<path>') can be used to specify the location of a backup or a destination for extracting data.
class File:
def __init__(self, path):
self.path = path
def __repr__(self):
return f"File('{self.path}')"
# S3('<uri>', '<access_key_id>', '<secret_access_key>') can be used to specify the location of a backup.
class S3:
def __init__(self, uri, access_key_id=None, secret_access_key=None):
self.uri = uri
self.access_key_id = access_key_id
self.secret_access_key = secret_access_key
def __repr__(self):
str = f"S3('{self.uri}'"
if self.access_key_id:
str += f", '{self.access_key_id}'"
if self.secret_access_key:
str += f", '{self.secret_access_key}'"
str += ")"
return str
####################################################################################################
# Implementation - helper classes and functions.
# Helps to check types.
class TypeChecks:
def is_location_like(obj):
return Location.can_init_from(obj)
def is_file_opened_for_reading(obj):
return callable(getattr(obj, "read", None))
def is_file_opened_for_writing(obj):
return callable(getattr(obj, "write", None))
def is_reader(obj):
return (
isinstance(obj, FileReader)
or isinstance(obj, S3Reader)
or isinstance(obj, ZipReader)
)
def is_writer(obj):
return isinstance(obj, FileWriter)
def check_is_writer(obj):
if TypeChecks.is_writer(obj):
return
raise Exception(f"{obj} is not a writer")
# Helps to represents either File() or S3() location and to parse them from a string.
class Location:
def __init__(self, obj):
self.__location = None
if isinstance(obj, Location):
self.__location = obj.__location
elif isinstance(obj, File) or isinstance(obj, S3):
self.__location = obj
elif isinstance(obj, str) and len(obj) > 0:
self.__location = Location.__parse_location(obj)
else:
raise Exception("Cannot parse a location from {obj}")
def can_init_from(obj):
if isinstance(obj, Location):
return True
elif isinstance(obj, File) or isinstance(obj, S3):
return True
elif isinstance(obj, str) and len(obj) > 0:
return True
else:
return False
def __repr__(self):
return repr(self.__location)
def create_reader(self):
if isinstance(self.__location, File):
path = self.__location.path
path, zip_filename = Location.__split_filename_if_archive(path)
reader = FileReader(path)
if zip_filename is not None:
reader = ZipReader(reader, zip_filename)
return reader
if isinstance(self.__location, S3):
uri = self.__location.uri
uri, zip_filename = Location.__split_filename_if_archive(uri)
reader = S3Reader(
uri,
self.__location.access_key_id,
self.__location.secret_access_key,
)
if zip_filename is not None:
reader = ZipReader(reader, zip_filename)
return reader
raise Exception(f"Couldn't create a reader from {self}")
def create_writer(self):
if isinstance(self.__location, File):
return FileWriter(self.__location.path)
raise Exception(f"Couldn't create a writer to {self}")
def __parse_location(desc):
startpos = len(desc) - len(desc.lstrip())
opening_parenthesis = desc.find("(", startpos)
if opening_parenthesis == -1:
endpos = len(desc.rstrip())
if startpos == endpos:
raise Exception(
f"Couldn't parse a location from '{desc}': empty string"
)
return File(desc[startpos:endpos])
closing_parenthesis = desc.find(")", opening_parenthesis)
if closing_parenthesis == -1:
raise Exception(
f"Couldn't parse a location from '{desc}': No closing parenthesis"
)
name = desc[startpos:opening_parenthesis]
args = desc[opening_parenthesis + 1 : closing_parenthesis].split(",")
args = [Location.__unquote_argument(arg.strip()) for arg in args]
endpos = closing_parenthesis + 1
if name == "File":
if len(args) == 1:
return File(args[0])
else:
raise Exception(
f"Couldn't parse a location from '{desc}': File(<path>) requires a single argument, got {len(args)} arguments"
)
if name == "S3":
if 1 <= len(args) and len(args) <= 3:
return S3(*args)
else:
raise Exception(
f"Couldn't parse a location from '{desc}': S3(<uri> [, <access_key_id>, <secret_access_key>]) requires from 1 to 3 arguments, got {len(args)} arguments"
)
raise Exception(
f"Couldn't parse a location from '{desc}': Unknown type {name} (only File and S3 are supported)"
)
def __unquote_argument(arg):
if arg.startswith("'"):
return arg.strip("'")
elif arg.startswith('"'):
return arg.strip('"')
else:
return arg
def __split_filename_if_archive(path):
is_archive = path.endswith(".zip") or path.endswith(".zipx")
if not is_archive:
return path, None
sep = path.rfind("/")
if sep == -1:
return "", path
return path[: sep + 1], path[sep + 1 :]
# Represents an empty file object.
class EmptyFileObj:
def close(self):
pass
def __enter__(self):
return self
def __exit__(self, exc_type, exc_value, traceback):
pass
def read(self, count=None):
return b""
# Represent a file object which concatenate data from two file objects.
class ConcatFileObj:
def __init__(self, fileobj1, fileobj2):
self.__fileobj1 = fileobj1
self.__fileobj2 = fileobj2
self.__first_is_already_read = False
def close(self):
if self.__fileobj1 is not None:
self.__fileobj1.close()
self.__fileobj1 = None
if self.__fileobj2 is not None:
self.__fileobj2.close()
self.__fileobj2 = None
def __enter__(self):
return self
def __exit__(self, exc_type, exc_value, traceback):
self.close()
def read(self, count=None):
read_data = b""
if count != 0 and not self.__first_is_already_read:
read_data += self.__fileobj1.read(count)
if (count is None) or (count > len(read_data)):
self.__first_is_already_read = True
if count is not None:
count -= len(read_data)
if count != 0:
read_data += self.__fileobj2.read(count)
return read_data
# Helps to read a File() backup.
class FileReader:
def __init__(self, root_path):
self.__root_path = root_path
def close(self):
pass
def __enter__(self):
return self
def __exit__(self, exc_type, exc_value, traceback):
pass
def file_exists(self, path):
return os.path.isfile(self.get_abs_path(path))
def get_file_size(self, path):
return os.path.getsize(self.get_abs_path(path))
def read_file(self, path):
with self.open_file(path) as f:
return f.read()
def open_file(self, path):
return open(self.get_abs_path(path), "rb")
def extract_file(self, path, writer, out_path):
if isinstance(writer, FileWriter):
shutil.copyfile(self.get_abs_path(path), writer.get_abs_path(out_path))
else:
with self.open_file(path) as istream:
with writer.open_file(out_path) as ostream:
shutil.copyfileobj(istream, ostream)
def get_abs_path(self, path):
if path.startswith("/"):
path = path[1:]
return os.path.join(self.__root_path, path)
# Helps to extract files to a File() destination.
class FileWriter:
def __init__(self, root_path):
self.__root_path = root_path
def __enter__(self):
return self
def __exit__(self, exc_type, exc_value, traceback):
pass
def open_file(self, path):
return open(self.get_abs_path(path), "wb")
def create_empty_file(self, path):
with self.open_file(path) as file:
pass
def make_dirs(self, path):
abs_path = self.get_abs_path(path)
if not os.path.isdir(abs_path):
os.makedirs(abs_path)
def get_abs_path(self, path):
if path.startswith("/"):
path = path[1:]
return os.path.join(self.__root_path, path)
# Helps to read a S3() backup.
class S3Reader:
def __init__(self, uri, access_key_id, secret_access_key):
s3_uri = S3URI(uri)
self.__bucket = s3_uri.bucket
self.__key = s3_uri.key
self.__client = None
try:
self.__client = boto3.client(
"s3",
endpoint_url=s3_uri.endpoint,
aws_access_key_id=access_key_id,
aws_secret_access_key=secret_access_key,
)
except:
self.close()
raise
def close(self):
if self.__client is not None:
self.__client.close()
self.__client = None
def __enter__(self):
return self
def __exit__(self, exc_type, exc_value, traceback):
self.close()
def file_exists(self, path):
try:
self.__client.head_object(Bucket=self.__bucket, Key=self.get_key(path))
return True
except botocore.exceptions.ClientError as e:
if e.response["Error"]["Code"] == "404":
return False
else:
raise
def get_file_size(self, path):
response = self.__client.head_object(
Bucket=self.__bucket, Key=self.get_key(path)
)
return response["ContentLength"]
def read_file(self, path):
with self.open_file(path) as f:
return f.read()
def open_file(self, path):
response = self.__client.get_object(
Bucket=self.__bucket, Key=self.get_key(path)
)
return response["Body"]
def extract_file(self, path, writer, out_path):
if isinstance(writer, FileWriter):
self.__client.download_file(
Bucket=self.__bucket,
Key=self.get_key(path),
Filename=writer.get_abs_path(out_path),
)
else:
with writer.open_file(out_path) as ostream:
self.__client.download_fileobj(
Bucket=self.__bucket, Key=self.get_key(path), Fileobj=ostream
)
def get_key(self, path):
if path.startswith("/"):
path = path[1:]
return self.__key + "/" + path
# Parses a S3 URI with detecting endpoint, bucket name, and key.
class S3URI:
def __init__(self, uri):
parsed_url = urlparse(uri, allow_fragments=False)
if not self.__parse_virtual_hosted(parsed_url) and not self.__parse_path_style(
parsed_url
):
raise Exception(f"S3URI: Could not parse {uri}")
# https://bucket-name.s3.Region.amazonaws.com/key
def __parse_virtual_hosted(self, parsed_url):
host = parsed_url.netloc
if host.find(".s3") == -1:
return False
2023-12-07 11:32:32 +00:00
self.bucket, new_host = host.split(".s3", maxsplit=1)
if len(self.bucket) < 3:
return False
new_host = "s3" + new_host
self.endpoint = parsed_url.scheme + "://" + new_host
path = parsed_url.path
if path.startswith("/"):
path = path[1:]
if path.endswith("/"):
path = path[:-1]
self.key = path
return True
# https://s3.Region.amazonaws.com/bucket-name/key
def __parse_path_style(self, parsed_url):
self.endpoint = parsed_url.scheme + "://" + parsed_url.netloc
path = parsed_url.path
if path.startswith("/"):
path = path[1:]
if path.endswith("/"):
path = path[:-1]
if path.find("/") == -1:
self.bucket = path
self.key = ""
else:
self.bucket, self.key = path.split("/", maxsplit=1)
if len(self.bucket) < 3:
return False
return True
# Helps to read a backup from a zip-archive.
class ZipReader:
def __init__(self, base_reader, archive_name):
self.__base_reader = None
self.__zipfileobj = None
self.__zipfile = None
try:
self.__base_reader = base_reader
self.__zipfileobj = base_reader.open_file(archive_name)
self.__zipfile = zipfile.ZipFile(self.__zipfileobj)
except:
self.close()
raise
def close(self):
if self.__zipfile is not None:
self.__zipfile.close()
self.__zipfile = None
if self.__zipfileobj is not None:
self.__zipfileobj.close()
self.__zipfileobj = None
if self.__base_reader is not None:
self.__base_reader.close()
self.__base_reader = None
def __enter__(self):
return self
def __exit__(self, exc_type, exc_value, traceback):
self.close()
def file_exists(self, path):
return self.__get_zippath(path).is_file()
def get_file_size(self, path):
return self.__get_zipinfo(path).file_size
def read_file(self, path):
return self.__get_zippath(path).read_bytes()
def open_file(self, path):
return self.__get_zippath(path).open(mode="rb")
def extract_file(self, path, writer, out_path):
with self.open_file(path) as istream:
with writer.open_file(out_path) as ostream:
shutil.copyfileobj(istream, ostream)
def __get_zippath(self, path):
if path.startswith("/"):
path = path[1:]
return zipfile.Path(self.__zipfile, path)
def __get_zipinfo(self, path):
if path.startswith("/"):
path = path[1:]
return self.__zipfile.getinfo(path)