2019-08-21 14:19:47 +00:00
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#include "ORCBlockInputFormat.h"
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#if USE_ORC
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#include <Formats/FormatFactory.h>
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#include <IO/ReadBufferFromMemory.h>
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#include <IO/WriteHelpers.h>
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#include <IO/copyData.h>
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#include <arrow/io/memory.h>
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2020-05-04 00:52:28 +00:00
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#include "ArrowBufferedStreams.h"
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2019-08-21 14:19:47 +00:00
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#include "ArrowColumnToCHColumn.h"
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2021-07-01 17:59:28 +00:00
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#include <DataTypes/NestedUtils.h>
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2019-08-21 14:19:47 +00:00
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namespace DB
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{
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2020-02-25 18:20:08 +00:00
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2020-02-25 18:10:48 +00:00
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namespace ErrorCodes
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{
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2020-05-03 23:19:56 +00:00
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extern const int BAD_ARGUMENTS;
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2020-02-25 18:10:48 +00:00
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extern const int CANNOT_READ_ALL_DATA;
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}
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2019-08-21 14:19:47 +00:00
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2021-04-15 04:01:15 +00:00
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#define THROW_ARROW_NOT_OK(status) \
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do \
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{ \
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if (::arrow::Status _s = (status); !_s.ok()) \
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throw Exception(_s.ToString(), ErrorCodes::BAD_ARGUMENTS); \
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} while (false)
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2021-07-01 17:59:28 +00:00
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ORCBlockInputFormat::ORCBlockInputFormat(ReadBuffer & in_, Block header_, const FormatSettings & format_settings_)
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: IInputFormat(std::move(header_), in_), format_settings(format_settings_)
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2020-02-25 18:20:08 +00:00
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{
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}
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2019-08-21 14:19:47 +00:00
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2020-02-25 18:20:08 +00:00
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Chunk ORCBlockInputFormat::generate()
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{
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Chunk res;
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2019-08-21 14:19:47 +00:00
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2021-04-18 01:51:53 +00:00
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if (!file_reader)
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prepareReader();
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2021-10-31 19:53:24 +00:00
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while (true)
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{
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if (!batch_reader)
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{
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arrow::Status reader_status = file_reader->NextStripeReader(
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DBMS_DEFAULT_BUFFER_SIZE, include_indices, &batch_reader);
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if (!reader_status.ok())
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throw ParsingException(ErrorCodes::CANNOT_READ_ALL_DATA,
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"Failed to create batch reader: {}",
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reader_status.ToString());
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}
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2019-08-21 14:19:47 +00:00
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2021-10-31 19:53:24 +00:00
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if (!batch_reader)
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break;
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2020-05-02 19:40:50 +00:00
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2021-10-31 19:53:24 +00:00
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std::shared_ptr<arrow::RecordBatch> batch_result;
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arrow::Status batch_status = batch_reader->ReadNext(&batch_result);
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if (!batch_status.ok())
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throw ParsingException(ErrorCodes::CANNOT_READ_ALL_DATA,
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"Error while reading batch of ORC data: {}",
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batch_status.ToString());
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if (!batch_result || !batch_result->num_rows())
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{
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batch_reader.reset();
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continue;
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}
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2019-11-26 23:46:19 +00:00
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2021-10-31 19:53:24 +00:00
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auto table_result = arrow::Table::FromRecordBatches({batch_result});
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if (!table_result.ok())
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throw ParsingException(ErrorCodes::CANNOT_READ_ALL_DATA,
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"Error while reading batch of ORC data: {}",
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table_result.status().ToString());
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using NameToColumnPtr = std::unordered_map<std::string, std::shared_ptr<arrow::ChunkedArray>>;
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NameToColumnPtr name_to_column_ptr;
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for (const auto& column_name : column_names)
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{
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arrow::ArrayVector vec = {batch_result->GetColumnByName(column_name)};
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std::shared_ptr<arrow::ChunkedArray> arrow_column = std::make_shared<arrow::ChunkedArray>(vec);
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name_to_column_ptr[column_name] = arrow_column;
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}
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arrow_column_to_ch_column->arrowColumnsToCHChunk(res, name_to_column_ptr);
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break;
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}
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2019-11-26 23:46:19 +00:00
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2020-02-25 18:20:08 +00:00
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return res;
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}
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void ORCBlockInputFormat::resetParser()
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{
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IInputFormat::resetParser();
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file_reader.reset();
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2021-05-14 10:48:31 +00:00
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include_indices.clear();
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2021-04-18 01:51:53 +00:00
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stripe_current = 0;
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2021-04-15 04:01:15 +00:00
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}
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2021-05-20 13:47:12 +00:00
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static size_t countIndicesForType(std::shared_ptr<arrow::DataType> type)
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2021-05-14 10:48:31 +00:00
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{
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if (type->id() == arrow::Type::LIST)
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return countIndicesForType(static_cast<arrow::ListType *>(type.get())->value_type()) + 1;
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2021-05-25 12:01:28 +00:00
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if (type->id() == arrow::Type::STRUCT)
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{
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2021-05-27 19:01:06 +00:00
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int indices = 1;
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2021-05-25 12:01:28 +00:00
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auto * struct_type = static_cast<arrow::StructType *>(type.get());
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for (int i = 0; i != struct_type->num_fields(); ++i)
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indices += countIndicesForType(struct_type->field(i)->type());
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2021-05-27 19:01:06 +00:00
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return indices;
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2021-05-25 12:01:28 +00:00
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}
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2021-05-27 19:01:06 +00:00
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if (type->id() == arrow::Type::MAP)
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{
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auto * map_type = static_cast<arrow::MapType *>(type.get());
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2021-05-27 19:10:45 +00:00
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return countIndicesForType(map_type->key_type()) + countIndicesForType(map_type->item_type());
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2021-05-27 19:01:06 +00:00
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}
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return 1;
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2021-05-14 10:48:31 +00:00
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}
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2021-04-15 04:01:15 +00:00
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void ORCBlockInputFormat::prepareReader()
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{
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2021-10-31 19:53:24 +00:00
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THROW_ARROW_NOT_OK(arrow::adapters::orc::ORCFileReader::Open(asArrowFile(*in, format_settings), arrow::default_memory_pool(), &file_reader));
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2021-04-15 04:01:15 +00:00
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stripe_total = file_reader->NumberOfStripes();
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stripe_current = 0;
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2021-05-14 10:48:31 +00:00
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std::shared_ptr<arrow::Schema> schema;
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THROW_ARROW_NOT_OK(file_reader->ReadSchema(&schema));
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2021-07-01 17:59:28 +00:00
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arrow_column_to_ch_column = std::make_unique<ArrowColumnToCHColumn>(getPort().getHeader(), "ORC", format_settings.orc.import_nested);
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std::unordered_set<String> nested_table_names;
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if (format_settings.orc.import_nested)
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nested_table_names = Nested::getAllTableNames(getPort().getHeader());
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2021-06-07 15:15:58 +00:00
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2021-05-24 11:39:08 +00:00
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/// In ReadStripe column indices should be started from 1,
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/// because 0 indicates to select all columns.
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int index = 1;
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2021-05-14 10:48:31 +00:00
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for (int i = 0; i < schema->num_fields(); ++i)
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{
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2021-05-25 12:01:28 +00:00
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/// LIST type require 2 indices, STRUCT - the number of elements + 1,
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/// so we should recursively count the number of indices we need for this type.
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2021-05-24 11:39:08 +00:00
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int indexes_count = countIndicesForType(schema->field(i)->type());
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2021-07-01 17:59:28 +00:00
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const auto & name = schema->field(i)->name();
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if (getPort().getHeader().has(name) || nested_table_names.contains(name))
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2021-05-14 10:48:31 +00:00
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{
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2021-10-31 19:53:24 +00:00
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column_names.push_back(name);
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2021-05-14 10:48:31 +00:00
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for (int j = 0; j != indexes_count; ++j)
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2021-05-24 11:39:08 +00:00
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include_indices.push_back(index + j);
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2021-05-14 10:48:31 +00:00
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}
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2021-05-24 11:39:08 +00:00
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index += indexes_count;
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2021-05-14 10:48:31 +00:00
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}
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2020-02-25 18:20:08 +00:00
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}
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2021-10-11 16:11:50 +00:00
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void registerInputFormatORC(FormatFactory &factory)
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2020-02-25 18:20:08 +00:00
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{
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2021-10-11 16:11:50 +00:00
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factory.registerInputFormat(
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2020-02-25 18:20:08 +00:00
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"ORC",
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[](ReadBuffer &buf,
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const Block &sample,
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const RowInputFormatParams &,
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2021-07-01 17:59:28 +00:00
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const FormatSettings & settings)
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2020-05-03 23:19:56 +00:00
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{
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2021-07-01 17:59:28 +00:00
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return std::make_shared<ORCBlockInputFormat>(buf, sample, settings);
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2020-02-25 18:20:08 +00:00
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});
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2021-03-30 21:25:37 +00:00
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factory.markFormatAsColumnOriented("ORC");
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2020-02-25 18:20:08 +00:00
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}
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2019-08-21 14:19:47 +00:00
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}
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#else
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namespace DB
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{
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class FormatFactory;
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2021-10-11 16:11:50 +00:00
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void registerInputFormatORC(FormatFactory &)
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2019-08-21 14:19:47 +00:00
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{
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}
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}
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#endif
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