in-memory parts: delay merges

src/Storages/MergeTree/MergeTreeBlockOutputStream.cpp

@@ -1,4 +1,5 @@
 #include <Storages/MergeTree/MergeTreeBlockOutputStream.h>
+#include <Storages/MergeTree/MergeTreeDataPartInMemory.h>
 #include <Storages/StorageMergeTree.h>
 #include <Interpreters/PartLog.h>
 
@@ -31,12 +32,25 @@ void MergeTreeBlockOutputStream::write(const Block & block)
 
         PartLog::addNewPart(storage.global_context, part, watch.elapsed());
 
-        if (isInMemoryPart(part) && storage.getSettings()->in_memory_parts_insert_sync)
+        if (auto * part_in_memory = dynamic_cast<MergeTreeDataPartInMemory *>(part.get()))
+        {
+            storage.in_memory_merges_throttler.add(part_in_memory->block.bytes(), part_in_memory->rows_count);
+
+            auto settings = storage.getSettings();
+            if (settings->in_memory_parts_insert_sync)
             {
                 if (!part->waitUntilMerged(in_memory_parts_timeout))
                     throw Exception("Timeout exceeded while waiting to write part "
                         + part->name + " on disk", ErrorCodes::TIMEOUT_EXCEEDED);
             }
+            else if (storage.merging_mutating_task_handle && !storage.in_memory_merges_throttler.needDelayMerge())
+            {
+                storage.in_memory_merges_throttler.reset();
+                storage.merging_mutating_task_handle->wake();
+            }
+
+            return;
+        }
 
         /// Initiate async merge - it will be done if it's good time for merge and if there are space in 'background_pool'.
         if (storage.merging_mutating_task_handle)

src/Storages/MergeTree/MergeTreeData.cpp

@@ -142,6 +142,7 @@ MergeTreeData::MergeTreeData(
     , data_parts_by_info(data_parts_indexes.get<TagByInfo>())
     , data_parts_by_state_and_info(data_parts_indexes.get<TagByStateAndInfo>())
     , parts_mover(this)
+    , in_memory_merges_throttler(storage_settings.get()->min_bytes_for_compact_part, storage_settings.get()->min_rows_for_compact_part)
 {
     if (relative_data_path.empty())
         throw Exception("MergeTree storages require data path", ErrorCodes::INCORRECT_FILE_NAME);
@@ -3673,4 +3674,24 @@ NamesAndTypesList MergeTreeData::getVirtuals() const
         NameAndTypePair("_sample_factor", std::make_shared<DataTypeFloat64>()),
     };
 }
+
+bool MergeTreeData::MergesThrottler::needDelayMerge() const
+{
+    std::lock_guard lock(mutex);
+    return (!max_bytes || have_bytes < max_bytes) && (!max_rows || have_rows < max_rows);
+}
+
+void MergeTreeData::MergesThrottler::add(size_t bytes, size_t rows)
+{
+    std::lock_guard lock(mutex);
+    have_bytes += bytes;
+    have_rows += rows;
+}
+
+void MergeTreeData::MergesThrottler::reset()
+{
+    have_bytes = 0;
+    have_rows = 0;
+}
+
 }

src/Storages/MergeTree/MergeTreeData.h

@@ -921,6 +921,25 @@ protected:
 
     bool areBackgroundMovesNeeded() const;
 
+    struct MergesThrottler
+    {
+        mutable std::mutex mutex;
+        size_t have_bytes = 0;
+        size_t have_rows = 0;
+
+        size_t max_bytes;
+        size_t max_rows;
+
+        MergesThrottler(size_t max_bytes_, size_t max_rows_)
+            : max_bytes(max_bytes_), max_rows(max_rows_) {}
+
+        bool needDelayMerge() const;
+        void add(size_t bytes, size_t rows);
+        void reset();
+    };
+
+    MergesThrottler in_memory_merges_throttler;
+
 private:
     /// RAII Wrapper for atomic work with currently moving parts
     /// Acuire them in constructor and remove them in destructor

src/Storages/MergeTree/MergeTreeDataMergerMutator.cpp

@@ -998,7 +998,7 @@ MergeTreeData::MutableDataPartPtr MergeTreeDataMergerMutator::mutatePartToTempor
             commands_for_part.emplace_back(command);
     }
 
-    if (!isStorageTouchedByMutations(storage_from_source_part, commands_for_part, context_for_reading))
+    if (source_part->isStoredOnDisk() && !isStorageTouchedByMutations(storage_from_source_part, commands_for_part, context_for_reading))
     {
         LOG_TRACE(log, "Part " << source_part->name << " doesn't change up to mutation version " << future_part.part_info.mutation);
         return data.cloneAndLoadDataPartOnSameDisk(source_part, "tmp_clone_", future_part.part_info);

src/Storages/MergeTree/MergeTreeDataPartWriterInMemory.cpp

@@ -45,6 +45,9 @@ void MergeTreeDataPartWriterInMemory::write(
             result_block.insert(block.getByName(col.name));
     }
 
+    index_granularity.appendMark(result_block.rows());
+    if (with_final_mark)
+        index_granularity.appendMark(0);
     part->block = std::move(result_block);
     block_written = true;
 }
@@ -55,10 +58,6 @@ void MergeTreeDataPartWriterInMemory::calculateAndSerializePrimaryIndex(const Bl
     if (!rows)
         return;
 
-    index_granularity.appendMark(rows);
-    if (with_final_mark)
-        index_granularity.appendMark(0);
-
     size_t primary_columns_num = primary_index_block.columns();
     index_columns.resize(primary_columns_num);
     for (size_t i = 0; i < primary_columns_num; ++i)

src/Storages/MergeTree/MergeTreeWriteAheadLog.cpp

@@ -11,6 +11,7 @@ namespace ErrorCodes
 {
     extern const int UNKNOWN_FORMAT_VERSION;
     extern const int CANNOT_READ_ALL_DATA;
+    extern const int BAD_DATA_PART_NAME;
 }
 
 
@@ -95,7 +96,9 @@ MergeTreeData::MutableDataPartsVector MergeTreeWriteAheadLog::restore()
         }
         catch (const Exception & e)
         {
-            if (e.code() == ErrorCodes::CANNOT_READ_ALL_DATA || e.code() == ErrorCodes::UNKNOWN_FORMAT_VERSION)
+            if (e.code() == ErrorCodes::CANNOT_READ_ALL_DATA
+                || e.code() == ErrorCodes::UNKNOWN_FORMAT_VERSION
+                || e.code() == ErrorCodes::BAD_DATA_PART_NAME)
             {
                 LOG_WARNING(&Logger::get(storage.getLogName() + " (WriteAheadLog)"),
                     "WAL file '" << path << "' is broken. " << e.displayText());

src/Storages/StorageMergeTree.cpp

@@ -822,8 +822,11 @@ BackgroundProcessingPoolTaskResult StorageMergeTree::mergeMutateTask()
 
         ///TODO: read deduplicate option from table config
         if (merge(false /*aggressive*/, {} /*partition_id*/, false /*final*/, false /*deduplicate*/))
-            return BackgroundProcessingPoolTaskResult::SUCCESS;
+        {
-
+            return in_memory_merges_throttler.needDelayMerge()
+                ? BackgroundProcessingPoolTaskResult::NOTHING_TO_DO
+                : BackgroundProcessingPoolTaskResult::SUCCESS;
+        }
 
         if (tryMutatePart())
             return BackgroundProcessingPoolTaskResult::SUCCESS;