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load partition and minmax index from disk [#CLICKHOUSE-3000]
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parent
e9f93028b8
commit
6906921932
@ -44,12 +44,12 @@ struct Memory : boost::noncopyable, Allocator<false>
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dealloc();
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dealloc();
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}
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}
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Memory(Memory && rhs)
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Memory(Memory && rhs) noexcept
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{
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{
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*this = std::move(rhs);
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*this = std::move(rhs);
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}
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}
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Memory & operator=(Memory && rhs)
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Memory & operator=(Memory && rhs) noexcept
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{
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{
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std::swap(m_capacity, rhs.m_capacity);
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std::swap(m_capacity, rhs.m_capacity);
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std::swap(m_size, rhs.m_size);
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std::swap(m_size, rhs.m_size);
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@ -32,6 +32,8 @@ public:
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ReadBufferFromFile(int fd, const std::string & original_file_name = {}, size_t buf_size = DBMS_DEFAULT_BUFFER_SIZE, int flags = -1,
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ReadBufferFromFile(int fd, const std::string & original_file_name = {}, size_t buf_size = DBMS_DEFAULT_BUFFER_SIZE, int flags = -1,
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char * existing_memory = nullptr, size_t alignment = 0);
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char * existing_memory = nullptr, size_t alignment = 0);
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ReadBufferFromFile(ReadBufferFromFile &&) = default;
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~ReadBufferFromFile() override;
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~ReadBufferFromFile() override;
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/// Close file before destruction of object.
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/// Close file before destruction of object.
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@ -18,6 +18,7 @@ class ReadBufferFromFileBase : public BufferWithOwnMemory<ReadBuffer>
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{
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{
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public:
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public:
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ReadBufferFromFileBase(size_t buf_size, char * existing_memory, size_t alignment);
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ReadBufferFromFileBase(size_t buf_size, char * existing_memory, size_t alignment);
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ReadBufferFromFileBase(ReadBufferFromFileBase &&) = default;
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virtual ~ReadBufferFromFileBase();
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virtual ~ReadBufferFromFileBase();
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off_t seek(off_t off, int whence = SEEK_SET);
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off_t seek(off_t off, int whence = SEEK_SET);
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virtual off_t getPositionInFile() = 0;
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virtual off_t getPositionInFile() = 0;
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@ -26,6 +26,8 @@ public:
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ReadBufferFromFileDescriptor(int fd_, size_t buf_size = DBMS_DEFAULT_BUFFER_SIZE, char * existing_memory = nullptr, size_t alignment = 0)
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ReadBufferFromFileDescriptor(int fd_, size_t buf_size = DBMS_DEFAULT_BUFFER_SIZE, char * existing_memory = nullptr, size_t alignment = 0)
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: ReadBufferFromFileBase(buf_size, existing_memory, alignment), fd(fd_), pos_in_file(0) {}
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: ReadBufferFromFileBase(buf_size, existing_memory, alignment), fd(fd_), pos_in_file(0) {}
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ReadBufferFromFileDescriptor(ReadBufferFromFileDescriptor &&) = default;
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int getFD() const override
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int getFD() const override
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{
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{
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return fd;
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return fd;
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@ -614,6 +614,12 @@ void MergeTreeDataPart::loadColumnsChecksumsIndexes(bool require_columns_checksu
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}
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}
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static ReadBufferFromFile openForReading(const String & path)
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{
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return ReadBufferFromFile(path, std::min(static_cast<Poco::File::FileSize>(DBMS_DEFAULT_BUFFER_SIZE), Poco::File(path).getSize()));
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}
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void MergeTreeDataPart::loadIndex()
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void MergeTreeDataPart::loadIndex()
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{
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{
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/// Size - in number of marks.
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/// Size - in number of marks.
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@ -640,8 +646,7 @@ void MergeTreeDataPart::loadIndex()
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}
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}
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String index_path = getFullPath() + "primary.idx";
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String index_path = getFullPath() + "primary.idx";
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ReadBufferFromFile index_file(index_path,
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ReadBufferFromFile index_file = openForReading(index_path);
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std::min(static_cast<Poco::File::FileSize>(DBMS_DEFAULT_BUFFER_SIZE), Poco::File(index_path).getSize()));
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for (size_t i = 0; i < size; ++i)
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for (size_t i = 0; i < size; ++i)
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for (size_t j = 0; j < key_size; ++j)
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for (size_t j = 0; j < key_size; ++j)
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@ -676,7 +681,28 @@ void MergeTreeDataPart::loadPartitionAndMinMaxIndex()
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minmax_idx.initialized = true;
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minmax_idx.initialized = true;
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}
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}
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else
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else
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throw Exception("TODO", ErrorCodes::LOGICAL_ERROR);
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{
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if (!storage.partition_expr_column_types.empty())
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{
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ReadBufferFromFile file = openForReading(getFullPath() + "partition.dat");
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partition.resize(storage.partition_expr_column_types.size());
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for (size_t i = 0; i < storage.partition_expr_column_types.size(); ++i)
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storage.partition_expr_column_types[i]->deserializeBinary(partition[i], file);
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}
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size_t minmax_idx_size = storage.minmax_idx_column_types.size();
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minmax_idx.min_column_values.resize(minmax_idx_size);
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minmax_idx.max_column_values.resize(minmax_idx_size);
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for (size_t i = 0; i < minmax_idx_size; ++i)
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{
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String file_name = getFullPath() + "minmax_" + escapeForFileName(storage.minmax_idx_columns[i]) + ".idx";
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ReadBufferFromFile file = openForReading(file_name);
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const DataTypePtr & type = storage.minmax_idx_column_types[i];
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type->deserializeBinary(minmax_idx.min_column_values[i], file);
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type->deserializeBinary(minmax_idx.max_column_values[i], file);
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}
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minmax_idx.initialized = true;
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}
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}
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}
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void MergeTreeDataPart::loadChecksums(bool require)
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void MergeTreeDataPart::loadChecksums(bool require)
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@ -689,7 +715,7 @@ void MergeTreeDataPart::loadChecksums(bool require)
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return;
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return;
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}
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}
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ReadBufferFromFile file(path, std::min(static_cast<Poco::File::FileSize>(DBMS_DEFAULT_BUFFER_SIZE), Poco::File(path).getSize()));
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ReadBufferFromFile file = openForReading(path);
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if (checksums.read(file))
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if (checksums.read(file))
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assertEOF(file);
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assertEOF(file);
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}
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}
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@ -727,7 +753,7 @@ void MergeTreeDataPart::loadColumns(bool require)
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return;
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return;
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}
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}
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ReadBufferFromFile file(path, std::min(static_cast<Poco::File::FileSize>(DBMS_DEFAULT_BUFFER_SIZE), Poco::File(path).getSize()));
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ReadBufferFromFile file = openForReading(path);
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columns.readText(file);
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columns.readText(file);
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}
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}
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@ -751,22 +777,45 @@ void MergeTreeDataPart::checkConsistency(bool require_part_metadata)
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}
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}
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}
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}
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if (storage.format_version > 0)
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{
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if (!storage.partition_expr_columns.empty() && !checksums.files.count("partition.dat"))
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throw Exception("No checksum for partition.dat", ErrorCodes::NO_FILE_IN_DATA_PART);
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for (const String & col_name : storage.minmax_idx_columns)
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{
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if (!checksums.files.count("minmax_" + escapeForFileName(col_name) + ".idx"))
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throw Exception("No minmax idx file checksum for column " + col_name, ErrorCodes::NO_FILE_IN_DATA_PART);
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}
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}
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checksums.checkSizes(path);
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checksums.checkSizes(path);
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}
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}
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else
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else
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{
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{
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if (!storage.sort_descr.empty())
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auto check_file_not_empty = [&path](const String & file_path)
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{
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{
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/// Check that the primary key is not empty.
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Poco::File file(file_path);
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Poco::File index_file(path + "primary.idx");
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if (!file.exists() || file.getSize() == 0)
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throw Exception("Part " + path + " is broken: " + file_path + " is empty", ErrorCodes::BAD_SIZE_OF_FILE_IN_DATA_PART);
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return file.getSize();
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};
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if (!index_file.exists() || index_file.getSize() == 0)
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/// Check that the primary key index is not empty.
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throw Exception("Part " + path + " is broken: primary key is empty.", ErrorCodes::BAD_SIZE_OF_FILE_IN_DATA_PART);
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if (!storage.sort_descr.empty())
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check_file_not_empty(path + "primary.idx");
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if (storage.format_version > 0)
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{
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if (!storage.partition_expr_columns.empty())
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check_file_not_empty(path + "partition.dat");
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for (const String & col_name : storage.minmax_idx_columns)
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check_file_not_empty(path + "minmax_" + escapeForFileName(col_name) + ".idx");
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}
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}
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/// Check that all marks are nonempty and have the same size.
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/// Check that all marks are nonempty and have the same size.
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auto check_marks = [&path](const NamesAndTypesList & columns, const std::string & extension)
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auto check_marks = [](const std::string & path, const NamesAndTypesList & columns, const std::string & extension)
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{
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{
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ssize_t marks_size = -1;
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ssize_t marks_size = -1;
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for (const NameAndTypePair & it : columns)
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for (const NameAndTypePair & it : columns)
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@ -794,8 +843,8 @@ void MergeTreeDataPart::checkConsistency(bool require_part_metadata)
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}
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}
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};
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};
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check_marks(path, columns, ".mrk");
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check_marks(columns, ".mrk");
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check_marks(path, columns, ".null.mrk");
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check_marks(columns, ".null.mrk");
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}
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}
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}
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}
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