Improve performance of format Regexp

This commit is contained in:
Alexey Milovidov 2022-02-01 02:07:48 +03:00
parent 678dd6b3f2
commit 872d0a0fbe
5 changed files with 9 additions and 159 deletions

View File

@ -45,7 +45,7 @@ bool RegexpFieldExtractor::parseRow(PeekableReadBuffer & buf)
buf.makeContinuousMemoryFromCheckpointToPos(); buf.makeContinuousMemoryFromCheckpointToPos();
buf.rollbackToCheckpoint(); buf.rollbackToCheckpoint();
bool match = RE2::FullMatchN(re2::StringPiece(buf.position(), line_size), regexp, re2_arguments_ptrs.data(), re2_arguments_ptrs.size()); bool match = re2_st::RE2::FullMatchN(re2_st::StringPiece(buf.position(), line_size), regexp, re2_arguments_ptrs.data(), re2_arguments_ptrs.size());
if (!match && !skip_unmatched) if (!match && !skip_unmatched)
throw Exception("Line \"" + std::string(buf.position(), line_size) + "\" doesn't match the regexp.", ErrorCodes::INCORRECT_DATA); throw Exception("Line \"" + std::string(buf.position(), line_size) + "\" doesn't match the regexp.", ErrorCodes::INCORRECT_DATA);

View File

@ -1,7 +1,7 @@
#pragma once #pragma once
#include <re2/re2.h> #include <re2_st/re2.h>
#include <re2/stringpiece.h> #include <re2_st/stringpiece.h>
#include <string> #include <string>
#include <vector> #include <vector>
#include <Core/Block.h> #include <Core/Block.h>
@ -12,6 +12,7 @@
#include <IO/PeekableReadBuffer.h> #include <IO/PeekableReadBuffer.h>
#include <Formats/ParsedTemplateFormatString.h> #include <Formats/ParsedTemplateFormatString.h>
namespace DB namespace DB
{ {
@ -26,17 +27,17 @@ public:
/// Return true if row was successfully parsed and row fields were extracted. /// Return true if row was successfully parsed and row fields were extracted.
bool parseRow(PeekableReadBuffer & buf); bool parseRow(PeekableReadBuffer & buf);
re2::StringPiece getField(size_t index) { return matched_fields[index]; } re2_st::StringPiece getField(size_t index) { return matched_fields[index]; }
size_t getMatchedFieldsSize() const { return matched_fields.size(); } size_t getMatchedFieldsSize() const { return matched_fields.size(); }
size_t getNumberOfGroups() const { return regexp.NumberOfCapturingGroups(); } size_t getNumberOfGroups() const { return regexp.NumberOfCapturingGroups(); }
private: private:
const RE2 regexp; const re2_st::RE2 regexp;
// The vector of fields extracted from line using regexp. // The vector of fields extracted from line using regexp.
std::vector<re2::StringPiece> matched_fields; std::vector<re2_st::StringPiece> matched_fields;
// These two vectors are needed to use RE2::FullMatchN (function for extracting fields). // These two vectors are needed to use RE2::FullMatchN (function for extracting fields).
std::vector<RE2::Arg> re2_arguments; std::vector<re2_st::RE2::Arg> re2_arguments;
std::vector<RE2::Arg *> re2_arguments_ptrs; std::vector<re2_st::RE2::Arg *> re2_arguments_ptrs;
bool skip_unmatched; bool skip_unmatched;
}; };

View File

@ -26,7 +26,6 @@ if (NOT DEFINED ENABLE_UTILS OR ENABLE_UTILS)
add_subdirectory (zookeeper-adjust-block-numbers-to-parts) add_subdirectory (zookeeper-adjust-block-numbers-to-parts)
add_subdirectory (wikistat-loader) add_subdirectory (wikistat-loader)
add_subdirectory (check-marks) add_subdirectory (check-marks)
add_subdirectory (convert-month-partitioned-parts)
add_subdirectory (checksum-for-compressed-block) add_subdirectory (checksum-for-compressed-block)
add_subdirectory (db-generator) add_subdirectory (db-generator)
add_subdirectory (wal-dump) add_subdirectory (wal-dump)

View File

@ -1,2 +0,0 @@
add_executable (convert-month-partitioned-parts main.cpp)
target_link_libraries(convert-month-partitioned-parts PRIVATE clickhouse_aggregate_functions dbms clickhouse_parsers boost::program_options)

View File

@ -1,148 +0,0 @@
#include <DataTypes/DataTypeDate.h>
#include <DataTypes/DataTypesNumber.h>
#include <IO/HashingWriteBuffer.h>
#include <IO/ReadBufferFromFile.h>
#include <IO/WriteBufferFromFile.h>
#include <Parsers/ASTFunction.h>
#include <Parsers/ASTIdentifier.h>
#include <Storages/MergeTree/IMergeTreeDataPart.h>
#include <Storages/MergeTree/MergeTreePartInfo.h>
#include <Storages/MergeTree/localBackup.h>
#include <Common/Exception.h>
#include <boost/program_options.hpp>
#include <Poco/Path.h>
#include <Poco/File.h>
#include <iostream>
#include <Disks/DiskLocal.h>
namespace DB
{
namespace ErrorCodes
{
extern const int DIRECTORY_ALREADY_EXISTS;
extern const int BAD_DATA_PART_NAME;
extern const int NO_FILE_IN_DATA_PART;
}
void run(String part_path, String date_column, String dest_path)
{
std::shared_ptr<IDisk> disk = std::make_shared<DiskLocal>("local", "/", 0);
auto old_part_path = Poco::Path::forDirectory(part_path);
const String & old_part_name = old_part_path.directory(old_part_path.depth() - 1);
String old_part_path_str = old_part_path.toString();
auto part_info = MergeTreePartInfo::fromPartName(old_part_name, MergeTreeDataFormatVersion(0));
String new_part_name = part_info.getPartName();
auto new_part_path = Poco::Path::forDirectory(dest_path);
new_part_path.pushDirectory(new_part_name);
if (Poco::File(new_part_path).exists())
throw Exception("Destination part directory `" + new_part_path.toString() + "` already exists",
ErrorCodes::DIRECTORY_ALREADY_EXISTS);
DayNum min_date;
DayNum max_date;
MergeTreePartInfo::parseMinMaxDatesFromPartName(old_part_name, min_date, max_date);
const auto & time_zone = DateLUT::instance();
UInt32 yyyymm = time_zone.toNumYYYYMM(min_date);
if (yyyymm != time_zone.toNumYYYYMM(max_date))
throw Exception("Part " + old_part_name + " spans different months",
ErrorCodes::BAD_DATA_PART_NAME);
ReadBufferFromFile checksums_in(old_part_path_str + "checksums.txt", 4096);
MergeTreeDataPartChecksums checksums;
checksums.read(checksums_in);
auto date_col_checksum_it = checksums.files.find(date_column + ".bin");
if (date_col_checksum_it == checksums.files.end())
throw Exception("Couldn't find checksum for the date column .bin file `" + date_column + ".bin`",
ErrorCodes::NO_FILE_IN_DATA_PART);
UInt64 rows = date_col_checksum_it->second.uncompressed_size / DataTypeDate().getSizeOfValueInMemory();
auto new_tmp_part_path = Poco::Path::forDirectory(dest_path);
new_tmp_part_path.pushDirectory("tmp_convert_" + new_part_name);
String new_tmp_part_path_str = new_tmp_part_path.toString();
try
{
Poco::File(new_tmp_part_path).remove(/* recursive = */ true);
}
catch (const Poco::FileNotFoundException &)
{
/// If the file is already deleted, do nothing.
}
localBackup(disk, old_part_path.toString(), new_tmp_part_path.toString(), {});
WriteBufferFromFile count_out(new_tmp_part_path_str + "count.txt", 4096);
HashingWriteBuffer count_out_hashing(count_out);
writeIntText(rows, count_out_hashing);
count_out_hashing.next();
checksums.files["count.txt"].file_size = count_out_hashing.count();
checksums.files["count.txt"].file_hash = count_out_hashing.getHash();
IMergeTreeDataPart::MinMaxIndex minmax_idx(min_date, max_date);
Names minmax_idx_columns = {date_column};
DataTypes minmax_idx_column_types = {std::make_shared<DataTypeDate>()};
minmax_idx.store(minmax_idx_columns, minmax_idx_column_types, disk, new_tmp_part_path_str, checksums);
Block partition_key_sample{{nullptr, std::make_shared<DataTypeUInt32>(), makeASTFunction("toYYYYMM", std::make_shared<ASTIdentifier>(date_column))->getColumnName()}};
MergeTreePartition partition(yyyymm);
partition.store(partition_key_sample, disk, new_tmp_part_path_str, checksums);
String partition_id = partition.getID(partition_key_sample);
Poco::File(new_tmp_part_path_str + "checksums.txt").setWriteable();
WriteBufferFromFile checksums_out(new_tmp_part_path_str + "checksums.txt", 4096);
checksums.write(checksums_out);
checksums_in.close();
checksums_out.close();
Poco::File(new_tmp_part_path).renameTo(new_part_path.toString());
}
}
int main(int argc, char ** argv)
try
{
boost::program_options::options_description desc("Allowed options");
desc.add_options()
("help,h", "produce help message")
("part", boost::program_options::value<std::string>()->required(),
"part directory to convert")
("date-column", boost::program_options::value<std::string>()->required(),
"name of the date column")
("to", boost::program_options::value<std::string>()->required(),
"destination directory")
;
boost::program_options::variables_map options;
boost::program_options::store(boost::program_options::parse_command_line(argc, argv, desc), options);
if (options.count("help") || options.size() < 3)
{
std::cout
<< "Convert a MergeTree part from the old-style month-partitioned table "
<< "(e.g. 20140317_20140323_2_2_0) to the format suitable for ATTACH'ing to a custom-partitioned "
<< "table (201403_2_2_0)." << std::endl << std::endl;
std::cout << desc << std::endl;
return 1;
}
auto part_path = options.at("part").as<DB::String>();
auto date_column = options.at("date-column").as<DB::String>();
auto dest_path = options.at("to").as<DB::String>();
DB::run(part_path, date_column, dest_path);
return 0;
}
catch (...)
{
std::cerr << DB::getCurrentExceptionMessage(true) << '\n';
throw;
}