Merge pull request #65716 from ClickHouse/backport/24.6/65046

Backport #65046 to 24.6: S3Queue improvements

src/Storages/ObjectStorage/StorageObjectStorageSource.cpp

@@ -193,21 +193,21 @@ Chunk StorageObjectStorageSource::generate()
             progress(num_rows, chunk_size ? chunk_size : chunk.bytes());
 
             const auto & object_info = reader.getObjectInfo();
-            const auto & filename = object_info.getFileName();
-            chassert(object_info.metadata);
+            const auto & filename = object_info->getFileName();
+            chassert(object_info->metadata);
             VirtualColumnUtils::addRequestedFileLikeStorageVirtualsToChunk(
                 chunk, read_from_format_info.requested_virtual_columns,
                 {
-                    .path = getUniqueStoragePathIdentifier(*configuration, reader.getObjectInfo(), false),
-                    .size = object_info.metadata->size_bytes,
+                    .path = getUniqueStoragePathIdentifier(*configuration, *object_info, false),
+                    .size = object_info->metadata->size_bytes,
                     .filename = &filename,
-                    .last_modified = object_info.metadata->last_modified
+                    .last_modified = object_info->metadata->last_modified
                 });
             return chunk;
         }
 
         if (reader.getInputFormat() && getContext()->getSettingsRef().use_cache_for_count_from_files)
-            addNumRowsToCache(reader.getObjectInfo(), total_rows_in_file);
+            addNumRowsToCache(*reader.getObjectInfo(), total_rows_in_file);
 
         total_rows_in_file = 0;
 

src/Storages/ObjectStorage/StorageObjectStorageSource.h

@@ -100,7 +100,7 @@ protected:
         PullingPipelineExecutor * operator->() { return reader.get(); }
         const PullingPipelineExecutor * operator->() const { return reader.get(); }
 
-        const ObjectInfo & getObjectInfo() const { return *object_info; }
+        ObjectInfoPtr getObjectInfo() const { return object_info; }
         const IInputFormat * getInputFormat() const { return dynamic_cast<const IInputFormat *>(source.get()); }
 
     private:

src/Storages/S3Queue/S3QueueIFileMetadata.cpp

@@ -35,6 +35,11 @@ namespace
     }
 }
 
+void S3QueueIFileMetadata::FileStatus::setProcessingEndTime()
+{
+    processing_end_time = now();
+}
+
 void S3QueueIFileMetadata::FileStatus::onProcessing()
 {
     state = FileStatus::State::Processing;
@@ -44,13 +49,15 @@ void S3QueueIFileMetadata::FileStatus::onProcessing()
 void S3QueueIFileMetadata::FileStatus::onProcessed()
 {
     state = FileStatus::State::Processed;
-    processing_end_time = now();
+    if (!processing_end_time)
+        setProcessingEndTime();
 }
 
 void S3QueueIFileMetadata::FileStatus::onFailed(const std::string & exception)
 {
     state = FileStatus::State::Failed;
-    processing_end_time = now();
+    if (!processing_end_time)
+        setProcessingEndTime();
     std::lock_guard lock(last_exception_mutex);
     last_exception = exception;
 }
@@ -120,7 +127,14 @@ S3QueueIFileMetadata::~S3QueueIFileMetadata()
 {
     if (processing_id_version.has_value())
     {
-        file_status->onFailed("Uncaught exception");
+        if (file_status->getException().empty())
+        {
+            if (std::current_exception())
+                file_status->onFailed(getCurrentExceptionMessage(true));
+            else
+                file_status->onFailed("Unprocessed exception");
+        }
+
         LOG_TEST(log, "Removing processing node in destructor for file: {}", path);
         try
         {
@@ -227,7 +241,16 @@ void S3QueueIFileMetadata::setProcessed()
 
     ProfileEvents::increment(ProfileEvents::S3QueueProcessedFiles);
     file_status->onProcessed();
-    setProcessedImpl();
+
+    try
+    {
+        setProcessedImpl();
+    }
+    catch (...)
+    {
+        file_status->onFailed(getCurrentExceptionMessage(true));
+        throw;
+    }
 
     processing_id.reset();
     processing_id_version.reset();
@@ -235,18 +258,36 @@ void S3QueueIFileMetadata::setProcessed()
     LOG_TRACE(log, "Set file {} as processed (rows: {})", path, file_status->processed_rows);
 }
 
-void S3QueueIFileMetadata::setFailed(const std::string & exception)
+void S3QueueIFileMetadata::setFailed(const std::string & exception_message, bool reduce_retry_count, bool overwrite_status)
 {
-    LOG_TRACE(log, "Setting file {} as failed (exception: {}, path: {})", path, exception, failed_node_path);
+    LOG_TRACE(log, "Setting file {} as failed (path: {}, reduce retry count: {}, exception: {})",
+              path, failed_node_path, reduce_retry_count, exception_message);
 
     ProfileEvents::increment(ProfileEvents::S3QueueFailedFiles);
-    file_status->onFailed(exception);
-    node_metadata.last_exception = exception;
+    if (overwrite_status || file_status->state != FileStatus::State::Failed)
+        file_status->onFailed(exception_message);
 
-    if (max_loading_retries == 0)
-        setFailedNonRetriable();
-    else
-        setFailedRetriable();
+    node_metadata.last_exception = exception_message;
+
+    if (reduce_retry_count)
+    {
+        try
+        {
+            if (max_loading_retries == 0)
+                setFailedNonRetriable();
+            else
+                setFailedRetriable();
+        }
+        catch (...)
+        {
+            auto full_exception = fmt::format(
+                "First exception: {}, exception while setting file as failed: {}",
+                exception_message, getCurrentExceptionMessage(true));
+
+            file_status->onFailed(full_exception);
+            throw;
+        }
+    }
 
     processing_id.reset();
     processing_id_version.reset();
@@ -296,19 +337,20 @@ void S3QueueIFileMetadata::setFailedRetriable()
     auto zk_client = getZooKeeper();
 
     /// Extract the number of already done retries from node_hash.retriable node if it exists.
+    Coordination::Requests requests;
     Coordination::Stat stat;
     std::string res;
-    if (zk_client->tryGet(retrieable_failed_node_path, res, &stat))
+    bool has_failed_before = zk_client->tryGet(retrieable_failed_node_path, res, &stat);
+    if (has_failed_before)
     {
         auto failed_node_metadata = NodeMetadata::fromString(res);
         node_metadata.retries = failed_node_metadata.retries + 1;
         file_status->retries = node_metadata.retries;
     }
 
-    LOG_TRACE(log, "File `{}` failed to process, try {}/{}",
-              path, node_metadata.retries, max_loading_retries);
+    LOG_TRACE(log, "File `{}` failed to process, try {}/{}, retries node exists: {} (failed node path: {})",
+              path, node_metadata.retries, max_loading_retries, has_failed_before, failed_node_path);
 
-    Coordination::Requests requests;
     if (node_metadata.retries >= max_loading_retries)
     {
         /// File is no longer retriable.

src/Storages/S3Queue/S3QueueIFileMetadata.h

@@ -19,6 +19,7 @@ public:
             None
         };
 
+        void setProcessingEndTime();
         void onProcessing();
         void onProcessed();
         void onFailed(const std::string & exception);
@@ -54,13 +55,15 @@ public:
 
     bool setProcessing();
     void setProcessed();
-    void setFailed(const std::string & exception);
+    void setFailed(const std::string & exception_message, bool reduce_retry_count, bool overwrite_status);
 
     virtual void setProcessedAtStartRequests(
         Coordination::Requests & requests,
         const zkutil::ZooKeeperPtr & zk_client) = 0;
 
     FileStatusPtr getFileStatus() { return file_status; }
+    const std::string & getPath() const { return path; }
+    size_t getMaxTries() const { return max_loading_retries; }
 
     struct NodeMetadata
     {

src/Storages/S3Queue/S3QueueMetadata.cpp

@@ -133,6 +133,9 @@ S3QueueMetadata::S3QueueMetadata(const fs::path & zookeeper_path_, const S3Queue
             generateRescheduleInterval(
                 settings.s3queue_cleanup_interval_min_ms, settings.s3queue_cleanup_interval_max_ms));
     }
+    LOG_TRACE(log, "Mode: {}, buckets: {}, processing threads: {}, result buckets num: {}",
+              settings.mode.toString(), settings.s3queue_buckets, settings.s3queue_processing_threads_num, buckets_num);
+
 }
 
 S3QueueMetadata::~S3QueueMetadata()
@@ -219,7 +222,7 @@ S3QueueMetadata::Bucket S3QueueMetadata::getBucketForPath(const std::string & pa
 S3QueueOrderedFileMetadata::BucketHolderPtr
 S3QueueMetadata::tryAcquireBucket(const Bucket & bucket, const Processor & processor)
 {
-    return S3QueueOrderedFileMetadata::tryAcquireBucket(zookeeper_path, bucket, processor);
+    return S3QueueOrderedFileMetadata::tryAcquireBucket(zookeeper_path, bucket, processor, log);
 }
 
 void S3QueueMetadata::initialize(

src/Storages/S3Queue/S3QueueOrderedFileMetadata.cpp

@@ -45,13 +45,15 @@ S3QueueOrderedFileMetadata::BucketHolder::BucketHolder(
     int bucket_version_,
     const std::string & bucket_lock_path_,
     const std::string & bucket_lock_id_path_,
-    zkutil::ZooKeeperPtr zk_client_)
+    zkutil::ZooKeeperPtr zk_client_,
+    LoggerPtr log_)
     : bucket_info(std::make_shared<BucketInfo>(BucketInfo{
         .bucket = bucket_,
         .bucket_version = bucket_version_,
         .bucket_lock_path = bucket_lock_path_,
         .bucket_lock_id_path = bucket_lock_id_path_}))
     , zk_client(zk_client_)
+    , log(log_)
 {
 }
 
@@ -61,7 +63,9 @@ void S3QueueOrderedFileMetadata::BucketHolder::release()
         return;
 
     released = true;
-    LOG_TEST(getLogger("S3QueueBucketHolder"), "Releasing bucket {}", bucket_info->bucket);
+
+    LOG_TEST(log, "Releasing bucket {}, version {}",
+             bucket_info->bucket, bucket_info->bucket_version);
 
     Coordination::Requests requests;
     /// Check that bucket lock version has not changed
@@ -72,11 +76,24 @@ void S3QueueOrderedFileMetadata::BucketHolder::release()
 
     Coordination::Responses responses;
     const auto code = zk_client->tryMulti(requests, responses);
+
+    if (code == Coordination::Error::ZOK)
+        LOG_TEST(log, "Released bucket {}, version {}",
+                 bucket_info->bucket, bucket_info->bucket_version);
+    else
+        LOG_TRACE(log,
+                  "Failed to release bucket {}, version {}: {}. "
+                  "This is normal if keeper session expired.",
+                  bucket_info->bucket, bucket_info->bucket_version, code);
+
     zkutil::KeeperMultiException::check(code, requests, responses);
 }
 
 S3QueueOrderedFileMetadata::BucketHolder::~BucketHolder()
 {
+    if (!released)
+        LOG_TEST(log, "Releasing bucket ({}) holder in destructor", bucket_info->bucket);
+
     try
     {
         release();
@@ -154,7 +171,8 @@ S3QueueOrderedFileMetadata::Bucket S3QueueOrderedFileMetadata::getBucketForPath(
 S3QueueOrderedFileMetadata::BucketHolderPtr S3QueueOrderedFileMetadata::tryAcquireBucket(
     const std::filesystem::path & zk_path,
     const Bucket & bucket,
-    const Processor & processor)
+    const Processor & processor,
+    LoggerPtr log_)
 {
     const auto zk_client = getZooKeeper();
     const auto bucket_lock_path = zk_path / "buckets" / toString(bucket) / "lock";
@@ -183,7 +201,7 @@ S3QueueOrderedFileMetadata::BucketHolderPtr S3QueueOrderedFileMetadata::tryAcqui
         const auto bucket_lock_version = set_response->stat.version;
 
         LOG_TEST(
-            getLogger("S3QueueOrderedFileMetadata"),
+            log_,
             "Processor {} acquired bucket {} for processing (bucket lock version: {})",
             processor, bucket, bucket_lock_version);
 
@@ -192,7 +210,8 @@ S3QueueOrderedFileMetadata::BucketHolderPtr S3QueueOrderedFileMetadata::tryAcqui
             bucket_lock_version,
             bucket_lock_path,
             bucket_lock_id_path,
-            zk_client);
+            zk_client,
+            log_);
     }
 
     if (code == Coordination::Error::ZNODEEXISTS)
@@ -384,8 +403,11 @@ void S3QueueOrderedFileMetadata::setProcessedImpl()
         auto code = zk_client->tryMulti(requests, responses);
         if (code == Coordination::Error::ZOK)
         {
-            if (max_loading_retries)
-                zk_client->tryRemove(failed_node_path + ".retriable", -1);
+            if (max_loading_retries
+                && zk_client->tryRemove(failed_node_path + ".retriable", -1) == Coordination::Error::ZOK)
+            {
+                LOG_TEST(log, "Removed node {}.retriable", failed_node_path);
+            }
             return;
         }
 

src/Storages/S3Queue/S3QueueOrderedFileMetadata.h

@@ -36,7 +36,8 @@ public:
     static BucketHolderPtr tryAcquireBucket(
         const std::filesystem::path & zk_path,
         const Bucket & bucket,
-        const Processor & processor);
+        const Processor & processor,
+        LoggerPtr log_);
 
     static S3QueueOrderedFileMetadata::Bucket getBucketForPath(const std::string & path, size_t buckets_num);
 
@@ -72,26 +73,32 @@ private:
         bool ignore_if_exists);
 };
 
-struct S3QueueOrderedFileMetadata::BucketHolder
+struct S3QueueOrderedFileMetadata::BucketHolder : private boost::noncopyable
 {
     BucketHolder(
         const Bucket & bucket_,
         int bucket_version_,
         const std::string & bucket_lock_path_,
         const std::string & bucket_lock_id_path_,
-        zkutil::ZooKeeperPtr zk_client_);
+        zkutil::ZooKeeperPtr zk_client_,
+        LoggerPtr log_);
 
     ~BucketHolder();
 
     Bucket getBucket() const { return bucket_info->bucket; }
     BucketInfoPtr getBucketInfo() const { return bucket_info; }
 
+    void setFinished() { finished = true; }
+    bool isFinished() const { return finished; }
+
     void release();
 
 private:
     BucketInfoPtr bucket_info;
     const zkutil::ZooKeeperPtr zk_client;
     bool released = false;
+    bool finished = false;
+    LoggerPtr log;
 };
 
 }

src/Storages/S3Queue/S3QueueSettings.h

@@ -19,7 +19,7 @@ class ASTStorage;
       0) \
     M(S3QueueAction, after_processing, S3QueueAction::KEEP, "Delete or keep file in S3 after successful processing", 0) \
     M(String, keeper_path, "", "Zookeeper node path", 0) \
-    M(UInt32, s3queue_loading_retries, 0, "Retry loading up to specified number of times", 0) \
+    M(UInt32, s3queue_loading_retries, 10, "Retry loading up to specified number of times", 0) \
     M(UInt32, s3queue_processing_threads_num, 1, "Number of processing threads", 0) \
     M(UInt32, s3queue_enable_logging_to_s3queue_log, 1, "Enable logging to system table system.s3queue_log", 0) \
     M(String, s3queue_last_processed_path, "", "For Ordered mode. Files that have lexicographically smaller file name are considered already processed", 0) \
@@ -31,6 +31,10 @@ class ASTStorage;
     M(UInt32, s3queue_cleanup_interval_min_ms, 60000, "For unordered mode. Polling backoff min for cleanup", 0) \
     M(UInt32, s3queue_cleanup_interval_max_ms, 60000, "For unordered mode. Polling backoff max for cleanup", 0) \
     M(UInt32, s3queue_buckets, 0, "Number of buckets for Ordered mode parallel processing", 0) \
+    M(UInt32, s3queue_max_processed_files_before_commit, 100, "Number of files which can be processed before being committed to keeper", 0) \
+    M(UInt32, s3queue_max_processed_rows_before_commit, 0, "Number of rows which can be processed before being committed to keeper", 0) \
+    M(UInt32, s3queue_max_processed_bytes_before_commit, 0, "Number of bytes which can be processed before being committed to keeper", 0) \
+    M(UInt32, s3queue_max_processing_time_sec_before_commit, 0, "Timeout in seconds after which to commit files committed to keeper", 0) \
 
 #define LIST_OF_S3QUEUE_SETTINGS(M, ALIAS) \
     S3QUEUE_RELATED_SETTINGS(M, ALIAS) \

src/Storages/S3Queue/S3QueueSource.cpp

@@ -32,16 +32,16 @@ namespace ErrorCodes
 }
 
 StorageS3QueueSource::S3QueueObjectInfo::S3QueueObjectInfo(
-        const ObjectInfo & object_info,
-        Metadata::FileMetadataPtr processing_holder_)
-    : ObjectInfo(object_info.relative_path, object_info.metadata)
-    , processing_holder(processing_holder_)
+        const Source::ObjectInfo & object_info,
+        S3QueueMetadata::FileMetadataPtr file_metadata_)
+    : Source::ObjectInfo(object_info.relative_path, object_info.metadata)
+    , file_metadata(file_metadata_)
 {
 }
 
 StorageS3QueueSource::FileIterator::FileIterator(
     std::shared_ptr<S3QueueMetadata> metadata_,
-    std::unique_ptr<GlobIterator> glob_iterator_,
+    std::unique_ptr<Source::GlobIterator> glob_iterator_,
     std::atomic<bool> & shutdown_called_,
     LoggerPtr logger_)
     : StorageObjectStorageSource::IIterator("S3QueueIterator")
@@ -52,25 +52,52 @@ StorageS3QueueSource::FileIterator::FileIterator(
 {
 }
 
+bool StorageS3QueueSource::FileIterator::isFinished() const
+{
+     LOG_TEST(log, "Iterator finished: {}, objects to retry: {}", iterator_finished, objects_to_retry.size());
+     return iterator_finished
+         && std::all_of(listed_keys_cache.begin(), listed_keys_cache.end(), [](const auto & v) { return v.second.keys.empty(); })
+         && objects_to_retry.empty();
+}
+
 size_t StorageS3QueueSource::FileIterator::estimatedKeysCount()
 {
     throw Exception(ErrorCodes::NOT_IMPLEMENTED, "Method estimateKeysCount is not implemented");
 }
 
-StorageS3QueueSource::ObjectInfoPtr StorageS3QueueSource::FileIterator::nextImpl(size_t processor)
+StorageS3QueueSource::Source::ObjectInfoPtr StorageS3QueueSource::FileIterator::nextImpl(size_t processor)
 {
-    ObjectInfoPtr object_info;
+    Source::ObjectInfoPtr object_info;
     S3QueueOrderedFileMetadata::BucketInfoPtr bucket_info;
 
     while (!shutdown_called)
     {
         if (metadata->useBucketsForProcessing())
+        {
+            std::lock_guard lock(mutex);
             std::tie(object_info, bucket_info) = getNextKeyFromAcquiredBucket(processor);
+        }
         else
-            object_info = glob_iterator->next(processor);
+        {
+            std::lock_guard lock(mutex);
+            if (objects_to_retry.empty())
+            {
+                object_info = glob_iterator->next(processor);
+                if (!object_info)
+                    iterator_finished = true;
+            }
+            else
+            {
+                object_info = objects_to_retry.front();
+                objects_to_retry.pop_front();
+            }
+        }
 
         if (!object_info)
+        {
+            LOG_TEST(log, "No object left");
             return {};
+        }
 
         if (shutdown_called)
         {
@@ -85,19 +112,64 @@ StorageS3QueueSource::ObjectInfoPtr StorageS3QueueSource::FileIterator::nextImpl
     return {};
 }
 
-std::pair<StorageS3QueueSource::ObjectInfoPtr, S3QueueOrderedFileMetadata::BucketInfoPtr>
+void StorageS3QueueSource::FileIterator::returnForRetry(Source::ObjectInfoPtr object_info)
+{
+    chassert(object_info);
+    if (metadata->useBucketsForProcessing())
+    {
+        const auto bucket = metadata->getBucketForPath(object_info->relative_path);
+        listed_keys_cache[bucket].keys.emplace_front(object_info);
+    }
+    else
+    {
+        objects_to_retry.push_back(object_info);
+    }
+}
+
+void StorageS3QueueSource::FileIterator::releaseFinishedBuckets()
+{
+    for (const auto & [processor, holders] : bucket_holders)
+    {
+        LOG_TEST(log, "Releasing {} bucket holders for processor {}", holders.size(), processor);
+
+        for (auto it = holders.begin(); it != holders.end(); ++it)
+        {
+            const auto & holder = *it;
+            const auto bucket = holder->getBucketInfo()->bucket;
+            if (!holder->isFinished())
+            {
+                /// Only the last holder in the list of holders can be non-finished.
+                chassert(std::next(it) == holders.end());
+
+                /// Do not release non-finished bucket holder. We will continue processing it.
+                LOG_TEST(log, "Bucket {} is not finished yet, will not release it", bucket);
+                break;
+            }
+
+            /// Release bucket lock.
+            holder->release();
+
+            /// Reset bucket processor in cached state.
+            auto cached_info = listed_keys_cache.find(bucket);
+            if (cached_info != listed_keys_cache.end())
+                cached_info->second.processor.reset();
+        }
+    }
+}
+
+std::pair<StorageS3QueueSource::Source::ObjectInfoPtr, S3QueueOrderedFileMetadata::BucketInfoPtr>
 StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processor)
 {
-    /// We need this lock to maintain consistency between listing s3 directory
-    /// and getting/putting result into listed_keys_cache.
-    std::lock_guard lock(buckets_mutex);
+    auto bucket_holder_it = bucket_holders.emplace(processor, std::vector<BucketHolderPtr>{}).first;
+    BucketHolder * current_bucket_holder = bucket_holder_it->second.empty() || bucket_holder_it->second.back()->isFinished()
+        ? nullptr
+        : bucket_holder_it->second.back().get();
 
-    auto bucket_holder_it = bucket_holders.emplace(processor, nullptr).first;
     auto current_processor = toString(processor);
 
     LOG_TEST(
         log, "Current processor: {}, acquired bucket: {}",
-        processor, bucket_holder_it->second ? toString(bucket_holder_it->second->getBucket()) : "None");
+        processor, current_bucket_holder ? toString(current_bucket_holder->getBucket()) : "None");
 
     while (true)
     {
@@ -106,9 +178,9 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
         /// In case it is already acquired, they put the key into listed_keys_cache,
         /// so that the thread who acquired the bucket will be able to see
         /// those keys without the need to list s3 directory once again.
-        if (bucket_holder_it->second)
+        if (current_bucket_holder)
         {
-            const auto bucket = bucket_holder_it->second->getBucket();
+            const auto bucket = current_bucket_holder->getBucket();
             auto it = listed_keys_cache.find(bucket);
             if (it != listed_keys_cache.end())
             {
@@ -141,7 +213,7 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
                     LOG_TEST(log, "Current bucket: {}, will process file: {}",
                              bucket, object_info->getFileName());
 
-                    return std::pair{object_info, bucket_holder_it->second->getBucketInfo()};
+                    return std::pair{object_info, current_bucket_holder->getBucketInfo()};
                 }
 
                 LOG_TEST(log, "Cache of bucket {} is empty", bucket);
@@ -156,9 +228,9 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
 
             if (iterator_finished)
             {
-                /// Bucket is fully processed - release the bucket.
-                bucket_holder_it->second->release();
-                bucket_holder_it->second.reset();
+                /// Bucket is fully processed, but we will release it later
+                /// - once we write and commit files via commit() method.
+                current_bucket_holder->setFinished();
             }
         }
         /// If processing thread has already acquired some bucket
@@ -167,8 +239,10 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
         /// because one processing thread can acquire only one bucket at a time.
         /// Once a thread is finished with its acquired bucket, it checks listed_keys_cache
         /// to see if there are keys from buckets not acquired by anyone.
-        if (!bucket_holder_it->second)
+        if (!current_bucket_holder)
         {
+            LOG_TEST(log, "Checking caches keys: {}", listed_keys_cache.size());
+
             for (auto it = listed_keys_cache.begin(); it != listed_keys_cache.end();)
             {
                 auto & [bucket, bucket_info] = *it;
@@ -193,8 +267,8 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
                     continue;
                 }
 
-                bucket_holder_it->second = metadata->tryAcquireBucket(bucket, current_processor);
-                if (!bucket_holder_it->second)
+                auto acquired_bucket = metadata->tryAcquireBucket(bucket, current_processor);
+                if (!acquired_bucket)
                 {
                     LOG_TEST(log, "Bucket {} is already locked for processing (keys: {})",
                              bucket, bucket_keys.size());
@@ -202,6 +276,9 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
                     continue;
                 }
 
+                bucket_holder_it->second.push_back(acquired_bucket);
+                current_bucket_holder = bucket_holder_it->second.back().get();
+
                 bucket_processor = current_processor;
 
                 /// Take the key from the front, the order is important.
@@ -211,7 +288,7 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
                 LOG_TEST(log, "Acquired bucket: {}, will process file: {}",
                          bucket, object_info->getFileName());
 
-                return std::pair{object_info, bucket_holder_it->second->getBucketInfo()};
+                return std::pair{object_info, current_bucket_holder->getBucketInfo()};
             }
         }
 
@@ -229,12 +306,12 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
 
             LOG_TEST(log, "Found next file: {}, bucket: {}, current bucket: {}, cached_keys: {}",
                      object_info->getFileName(), bucket,
-                     bucket_holder_it->second ? toString(bucket_holder_it->second->getBucket()) : "None",
+                     current_bucket_holder ? toString(current_bucket_holder->getBucket()) : "None",
                      bucket_cache.keys.size());
 
-            if (bucket_holder_it->second)
+            if (current_bucket_holder)
             {
-                if (bucket_holder_it->second->getBucket() != bucket)
+                if (current_bucket_holder->getBucket() != bucket)
                 {
                     /// Acquired bucket differs from object's bucket,
                     /// put it into bucket's cache and continue.
@@ -242,13 +319,16 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
                     continue;
                 }
                 /// Bucket is already acquired, process the file.
-                return std::pair{object_info, bucket_holder_it->second->getBucketInfo()};
+                return std::pair{object_info, current_bucket_holder->getBucketInfo()};
             }
             else
             {
-                bucket_holder_it->second = metadata->tryAcquireBucket(bucket, current_processor);
-                if (bucket_holder_it->second)
+                auto acquired_bucket = metadata->tryAcquireBucket(bucket, current_processor);
+                if (acquired_bucket)
                 {
+                    bucket_holder_it->second.push_back(acquired_bucket);
+                    current_bucket_holder = bucket_holder_it->second.back().get();
+
                     bucket_cache.processor = current_processor;
                     if (!bucket_cache.keys.empty())
                     {
@@ -258,7 +338,7 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
                         object_info = bucket_cache.keys.front();
                         bucket_cache.keys.pop_front();
                     }
-                    return std::pair{object_info, bucket_holder_it->second->getBucketInfo()};
+                    return std::pair{object_info, current_bucket_holder->getBucketInfo()};
                 }
                 else
                 {
@@ -270,12 +350,6 @@ StorageS3QueueSource::FileIterator::getNextKeyFromAcquiredBucket(size_t processo
         }
         else
         {
-            if (bucket_holder_it->second)
-            {
-                bucket_holder_it->second->release();
-                bucket_holder_it->second.reset();
-            }
-
             LOG_TEST(log, "Reached the end of file iterator");
             iterator_finished = true;
 
@@ -301,7 +375,12 @@ StorageS3QueueSource::StorageS3QueueSource(
     const std::atomic<bool> & table_is_being_dropped_,
     std::shared_ptr<S3QueueLog> s3_queue_log_,
     const StorageID & storage_id_,
-    LoggerPtr log_)
+    LoggerPtr log_,
+    size_t max_processed_files_before_commit_,
+    size_t max_processed_rows_before_commit_,
+    size_t max_processed_bytes_before_commit_,
+    size_t max_processing_time_sec_before_commit_,
+    bool commit_once_processed_)
     : ISource(header_)
     , WithContext(context_)
     , name(std::move(name_))
@@ -314,6 +393,11 @@ StorageS3QueueSource::StorageS3QueueSource(
     , table_is_being_dropped(table_is_being_dropped_)
     , s3_queue_log(s3_queue_log_)
     , storage_id(storage_id_)
+    , max_processed_files_before_commit(max_processed_files_before_commit_)
+    , max_processed_rows_before_commit(max_processed_rows_before_commit_)
+    , max_processed_bytes_before_commit(max_processed_bytes_before_commit_)
+    , max_processing_time_sec_before_commit(max_processing_time_sec_before_commit_)
+    , commit_once_processed(commit_once_processed_)
     , remove_file_func(remove_file_func_)
     , log(log_)
 {
@@ -329,24 +413,52 @@ void StorageS3QueueSource::lazyInitialize(size_t processor)
     if (initialized)
         return;
 
+    LOG_TEST(log, "Initializing a new reader");
+
     internal_source->lazyInitialize(processor);
     reader = std::move(internal_source->reader);
     if (reader)
         reader_future = std::move(internal_source->reader_future);
+
     initialized = true;
 }
 
 Chunk StorageS3QueueSource::generate()
+{
+    Chunk chunk;
+    try
+    {
+        chunk = generateImpl();
+    }
+    catch (...)
+    {
+        if (commit_once_processed)
+            commit(false, getCurrentExceptionMessage(true));
+
+        throw;
+    }
+
+    if (!chunk && commit_once_processed)
+    {
+        commit(true);
+    }
+    return chunk;
+}
+
+Chunk StorageS3QueueSource::generateImpl()
 {
     lazyInitialize(processor_id);
 
     while (true)
     {
         if (!reader)
+        {
+            LOG_TEST(log, "No reader");
             break;
+        }
 
-        const auto * object_info = dynamic_cast<const S3QueueObjectInfo *>(&reader.getObjectInfo());
-        auto file_metadata = object_info->processing_holder;
+        const auto * object_info = dynamic_cast<const S3QueueObjectInfo *>(reader.getObjectInfo().get());
+        auto file_metadata = object_info->file_metadata;
         auto file_status = file_metadata->getFileStatus();
 
         if (isCancelled())
@@ -357,7 +469,7 @@ Chunk StorageS3QueueSource::generate()
             {
                 try
                 {
-                    file_metadata->setFailed("Cancelled");
+                    file_metadata->setFailed("Cancelled", /* reduce_retry_count */true, /* overwrite_status */false);
                 }
                 catch (...)
                 {
@@ -365,16 +477,19 @@ Chunk StorageS3QueueSource::generate()
                              object_info->relative_path, getCurrentExceptionMessage(true));
                 }
 
-                appendLogElement(reader.getObjectInfo().getPath(), *file_status, processed_rows_from_file, false);
+                appendLogElement(reader.getObjectInfo()->getPath(), *file_status, processed_rows_from_file, false);
             }
 
+            LOG_TEST(log, "Query is cancelled");
             break;
         }
 
-        const auto & path = reader.getObjectInfo().getPath();
+        const auto & path = reader.getObjectInfo()->getPath();
 
         if (shutdown_called)
         {
+            LOG_TEST(log, "Shutdown called");
+
             if (processed_rows_from_file == 0)
                 break;
 
@@ -386,7 +501,7 @@ Chunk StorageS3QueueSource::generate()
 
                 try
                 {
-                    file_metadata->setFailed("Table is dropped");
+                    file_metadata->setFailed("Table is dropped", /* reduce_retry_count */true, /* overwrite_status */false);
                 }
                 catch (...)
                 {
@@ -420,15 +535,16 @@ Chunk StorageS3QueueSource::generate()
 
                 file_status->processed_rows += chunk.getNumRows();
                 processed_rows_from_file += chunk.getNumRows();
+                total_processed_rows += chunk.getNumRows();
+                total_processed_bytes += chunk.bytes();
 
                 VirtualColumnUtils::addRequestedFileLikeStorageVirtualsToChunk(
                     chunk, requested_virtual_columns,
                     {
                         .path = path,
-                        .size = reader.getObjectInfo().metadata->size_bytes
+                        .size = reader.getObjectInfo()->metadata->size_bytes
                     });
 
-
                 return chunk;
             }
         }
@@ -437,22 +553,84 @@ Chunk StorageS3QueueSource::generate()
             const auto message = getCurrentExceptionMessage(true);
             LOG_ERROR(log, "Got an error while pulling chunk. Will set file {} as failed. Error: {} ", path, message);
 
-            file_metadata->setFailed(message);
-
+            failed_during_read_files.push_back(file_metadata);
+            file_status->onFailed(getCurrentExceptionMessage(true));
             appendLogElement(path, *file_status, processed_rows_from_file, false);
+
+            if (processed_rows_from_file == 0)
+            {
+                auto * file_iterator = dynamic_cast<FileIterator *>(internal_source->file_iterator.get());
+                chassert(file_iterator);
+
+                if (file_status->retries < file_metadata->getMaxTries())
+                    file_iterator->returnForRetry(reader.getObjectInfo());
+
+                /// If we did not process any rows from the failed file,
+                /// commit all previously processed files,
+                /// not to lose the work already done.
+                return {};
+            }
+
             throw;
         }
 
-        file_metadata->setProcessed();
-        applyActionAfterProcessing(reader.getObjectInfo().relative_path);
-
         appendLogElement(path, *file_status, processed_rows_from_file, true);
+
+        file_status->setProcessingEndTime();
         file_status.reset();
+
         processed_rows_from_file = 0;
+        processed_files.push_back(file_metadata);
+
+        if (processed_files.size() == max_processed_files_before_commit)
+        {
+            LOG_TRACE(log, "Number of max processed files before commit reached "
+                      "(rows: {}, bytes: {}, files: {})",
+                      total_processed_rows, total_processed_bytes, processed_files.size());
+            break;
+        }
+
+        bool rows_or_bytes_or_time_limit_reached = false;
+        if (max_processed_rows_before_commit
+            && total_processed_rows == max_processed_rows_before_commit)
+        {
+            LOG_TRACE(log, "Number of max processed rows before commit reached "
+                      "(rows: {}, bytes: {}, files: {})",
+                      total_processed_rows, total_processed_bytes, processed_files.size());
+
+            rows_or_bytes_or_time_limit_reached = true;
+        }
+        else if (max_processed_bytes_before_commit
+                 && total_processed_bytes == max_processed_bytes_before_commit)
+        {
+            LOG_TRACE(log, "Number of max processed bytes before commit reached "
+                      "(rows: {}, bytes: {}, files: {})",
+                      total_processed_rows, total_processed_bytes, processed_files.size());
+
+            rows_or_bytes_or_time_limit_reached = true;
+        }
+        else if (max_processing_time_sec_before_commit
+                 && total_stopwatch.elapsedSeconds() >= max_processing_time_sec_before_commit)
+        {
+            LOG_TRACE(log, "Max processing time before commit reached "
+                      "(rows: {}, bytes: {}, files: {})",
+                      total_processed_rows, total_processed_bytes, processed_files.size());
+
+            rows_or_bytes_or_time_limit_reached = true;
+        }
+
+        if (rows_or_bytes_or_time_limit_reached)
+        {
+            if (!reader_future.valid())
+                break;
+
+            LOG_TRACE(log, "Rows or bytes limit reached, but we have one more file scheduled already, "
+                      "will process it despite the limit");
+        }
 
         if (shutdown_called)
         {
-            LOG_INFO(log, "Shutdown was called, stopping sync");
+            LOG_TRACE(log, "Shutdown was called, stopping sync");
             break;
         }
 
@@ -460,19 +638,55 @@ Chunk StorageS3QueueSource::generate()
         reader = reader_future.get();
 
         if (!reader)
+        {
+            LOG_TEST(log, "Reader finished");
             break;
+        }
 
-        file_status = files_metadata->getFileStatus(reader.getObjectInfo().getPath());
+        file_status = files_metadata->getFileStatus(reader.getObjectInfo()->getPath());
 
-        /// Even if task is finished the thread may be not freed in pool.
-        /// So wait until it will be freed before scheduling a new task.
-        internal_source->create_reader_pool->wait();
-        reader_future = internal_source->createReaderAsync(processor_id);
+        if (!rows_or_bytes_or_time_limit_reached && processed_files.size() + 1 < max_processed_files_before_commit)
+        {
+            /// Even if task is finished the thread may be not freed in pool.
+            /// So wait until it will be freed before scheduling a new task.
+            internal_source->create_reader_pool->wait();
+            reader_future = internal_source->createReaderAsync(processor_id);
+        }
     }
 
     return {};
 }
 
+void StorageS3QueueSource::commit(bool success, const std::string & exception_message)
+{
+    LOG_TEST(log, "Having {} files to set as {}, failed files: {}",
+             processed_files.size(), success ? "Processed" : "Failed", failed_during_read_files.size());
+
+    for (const auto & file_metadata : processed_files)
+    {
+        if (success)
+        {
+            file_metadata->setProcessed();
+            applyActionAfterProcessing(file_metadata->getPath());
+        }
+        else
+            file_metadata->setFailed(
+                exception_message,
+                /* reduce_retry_count */false,
+                /* overwrite_status */true);
+    }
+
+    for (const auto & file_metadata : failed_during_read_files)
+    {
+        /// `exception` from commit args is from insertion to storage.
+        /// Here we do not used it as failed_during_read_files were not inserted into storage, but skipped.
+        file_metadata->setFailed(
+            file_metadata->getFileStatus()->getException(),
+            /* reduce_retry_count */true,
+            /* overwrite_status */false);
+    }
+}
+
 void StorageS3QueueSource::applyActionAfterProcessing(const String & path)
 {
     switch (action)

src/Storages/S3Queue/S3QueueSource.h

@@ -20,24 +20,18 @@ class StorageS3QueueSource : public ISource, WithContext
 {
 public:
     using Storage = StorageObjectStorage;
-    using ConfigurationPtr = Storage::ConfigurationPtr;
-    using GlobIterator = StorageObjectStorageSource::GlobIterator;
-    using ZooKeeperGetter = std::function<zkutil::ZooKeeperPtr()>;
+    using Source = StorageObjectStorageSource;
     using RemoveFileFunc = std::function<void(std::string)>;
-    using FileStatusPtr = S3QueueMetadata::FileStatusPtr;
-    using ReaderHolder = StorageObjectStorageSource::ReaderHolder;
-    using Metadata = S3QueueMetadata;
-    using ObjectInfo = StorageObjectStorageSource::ObjectInfo;
-    using ObjectInfoPtr = std::shared_ptr<ObjectInfo>;
-    using ObjectInfos = std::vector<ObjectInfoPtr>;
+    using BucketHolderPtr = S3QueueOrderedFileMetadata::BucketHolderPtr;
+    using BucketHolder = S3QueueOrderedFileMetadata::BucketHolder;
 
-    struct S3QueueObjectInfo : public ObjectInfo
+    struct S3QueueObjectInfo : public Source::ObjectInfo
     {
         S3QueueObjectInfo(
-            const ObjectInfo & object_info,
-            Metadata::FileMetadataPtr processing_holder_);
+            const Source::ObjectInfo & object_info,
+            S3QueueMetadata::FileMetadataPtr file_metadata_);
 
-        Metadata::FileMetadataPtr processing_holder;
+        S3QueueMetadata::FileMetadataPtr file_metadata;
     };
 
     class FileIterator : public StorageObjectStorageSource::IIterator
@@ -45,39 +39,59 @@ public:
     public:
         FileIterator(
             std::shared_ptr<S3QueueMetadata> metadata_,
-            std::unique_ptr<GlobIterator> glob_iterator_,
+            std::unique_ptr<Source::GlobIterator> glob_iterator_,
             std::atomic<bool> & shutdown_called_,
             LoggerPtr logger_);
 
+        bool isFinished() const;
+
         /// Note:
         /// List results in s3 are always returned in UTF-8 binary order.
         /// (https://docs.aws.amazon.com/AmazonS3/latest/userguide/ListingKeysUsingAPIs.html)
-        ObjectInfoPtr nextImpl(size_t processor) override;
+        Source::ObjectInfoPtr nextImpl(size_t processor) override;
 
         size_t estimatedKeysCount() override;
 
+        /// If the key was taken from iterator via next() call,
+        /// we might later want to return it back for retrying.
+        void returnForRetry(Source::ObjectInfoPtr object_info);
+
+        /// Release hold buckets.
+        /// In fact, they could be released in destructors of BucketHolder,
+        /// but we anyway try to release them explicitly,
+        /// because we want to be able to rethrow exceptions if they might happen.
+        void releaseFinishedBuckets();
+
     private:
         using Bucket = S3QueueMetadata::Bucket;
         using Processor = S3QueueMetadata::Processor;
 
         const std::shared_ptr<S3QueueMetadata> metadata;
-        const std::unique_ptr<GlobIterator> glob_iterator;
+        const std::unique_ptr<Source::GlobIterator> glob_iterator;
 
         std::atomic<bool> & shutdown_called;
         std::mutex mutex;
         LoggerPtr log;
 
-        std::mutex buckets_mutex;
         struct ListedKeys
         {
-            std::deque<ObjectInfoPtr> keys;
+            std::deque<Source::ObjectInfoPtr> keys;
             std::optional<Processor> processor;
         };
+        /// A cache of keys which were iterated via glob_iterator, but not taken for processing.
         std::unordered_map<Bucket, ListedKeys> listed_keys_cache;
-        bool iterator_finished = false;
-        std::unordered_map<size_t, S3QueueOrderedFileMetadata::BucketHolderPtr> bucket_holders;
 
-        std::pair<ObjectInfoPtr, S3QueueOrderedFileMetadata::BucketInfoPtr> getNextKeyFromAcquiredBucket(size_t processor);
+        /// We store a vector of holders, because we cannot release them until processed files are committed.
+        std::unordered_map<size_t, std::vector<BucketHolderPtr>> bucket_holders;
+
+        /// Is glob_iterator finished?
+        std::atomic_bool iterator_finished = false;
+
+        /// Only for processing without buckets.
+        std::deque<Source::ObjectInfoPtr> objects_to_retry;
+
+        std::pair<Source::ObjectInfoPtr, S3QueueOrderedFileMetadata::BucketInfoPtr> getNextKeyFromAcquiredBucket(size_t processor);
+        bool hasKeysForProcessor(const Processor & processor) const;
     };
 
     StorageS3QueueSource(
@@ -94,7 +108,12 @@ public:
         const std::atomic<bool> & table_is_being_dropped_,
         std::shared_ptr<S3QueueLog> s3_queue_log_,
         const StorageID & storage_id_,
-        LoggerPtr log_);
+        LoggerPtr log_,
+        size_t max_processed_files_before_commit_,
+        size_t max_processed_rows_before_commit_,
+        size_t max_processed_bytes_before_commit_,
+        size_t max_processing_time_sec_before_commit_,
+        bool commit_once_processed_);
 
     static Block getHeader(Block sample_block, const std::vector<NameAndTypePair> & requested_virtual_columns);
 
@@ -102,6 +121,10 @@ public:
 
     Chunk generate() override;
 
+    /// Commit files after insertion into storage finished.
+    /// `success` defines whether insertion was successful or not.
+    void commit(bool success, const std::string & exception_message = {});
+
 private:
     const String name;
     const size_t processor_id;
@@ -113,17 +136,29 @@ private:
     const std::atomic<bool> & table_is_being_dropped;
     const std::shared_ptr<S3QueueLog> s3_queue_log;
     const StorageID storage_id;
+    const size_t max_processed_files_before_commit;
+    const size_t max_processed_rows_before_commit;
+    const size_t max_processed_bytes_before_commit;
+    const size_t max_processing_time_sec_before_commit;
+    const bool commit_once_processed;
 
     RemoveFileFunc remove_file_func;
     LoggerPtr log;
 
-    ReaderHolder reader;
-    std::future<ReaderHolder> reader_future;
+    std::vector<S3QueueMetadata::FileMetadataPtr> processed_files;
+    std::vector<S3QueueMetadata::FileMetadataPtr> failed_during_read_files;
+
+    Source::ReaderHolder reader;
+    std::future<Source::ReaderHolder> reader_future;
     std::atomic<bool> initialized{false};
+
     size_t processed_rows_from_file = 0;
+    size_t total_processed_rows = 0;
+    size_t total_processed_bytes = 0;
 
-    S3QueueOrderedFileMetadata::BucketHolderPtr current_bucket_holder;
+    Stopwatch total_stopwatch {CLOCK_MONOTONIC_COARSE};
 
+    Chunk generateImpl();
     void applyActionAfterProcessing(const String & path);
     void appendLogElement(const std::string & filename, S3QueueMetadata::FileStatus & file_status_, size_t processed_rows, bool processed);
     void lazyInitialize(size_t processor);

src/Storages/S3Queue/S3QueueUnorderedFileMetadata.cpp

@@ -130,8 +130,11 @@ void S3QueueUnorderedFileMetadata::setProcessedImpl()
     const auto code = zk_client->tryMulti(requests, responses);
     if (code == Coordination::Error::ZOK)
     {
-        if (max_loading_retries)
-            zk_client->tryRemove(failed_node_path + ".retriable", -1);
+        if (max_loading_retries
+            && zk_client->tryRemove(failed_node_path + ".retriable", -1) == Coordination::Error::ZOK)
+        {
+            LOG_TEST(log, "Removed node {}.retriable", failed_node_path);
+        }
 
         LOG_TRACE(log, "Moved file `{}` to processed (node path: {})", path, processed_node_path);
         return;

src/Storages/S3Queue/StorageS3Queue.cpp

@@ -26,6 +26,7 @@
 #include <Storages/prepareReadingFromFormat.h>
 #include <Storages/ObjectStorage/S3/Configuration.h>
 #include <Storages/ObjectStorage/Utils.h>
+#include <Common/getNumberOfPhysicalCPUCores.h>
 #include <QueryPipeline/QueryPipelineBuilder.h>
 
 #include <filesystem>
@@ -71,7 +72,12 @@ namespace
         return zkutil::extractZooKeeperPath(result_zk_path, true);
     }
 
-    void checkAndAdjustSettings(S3QueueSettings & s3queue_settings, const Settings & settings, bool is_attach)
+    void checkAndAdjustSettings(
+        S3QueueSettings & s3queue_settings,
+        const Settings & settings,
+        bool is_attach,
+        const LoggerPtr & log,
+        ASTStorage * engine_args)
     {
         if (!is_attach && !s3queue_settings.mode.changed)
         {
@@ -79,11 +85,6 @@ namespace
         }
         /// In case !is_attach, we leave Ordered mode as default for compatibility.
 
-        if (!s3queue_settings.s3queue_processing_threads_num)
-        {
-            throw Exception(ErrorCodes::BAD_ARGUMENTS, "Setting `s3queue_processing_threads_num` cannot be set to zero");
-        }
-
         if (!s3queue_settings.s3queue_enable_logging_to_s3queue_log.changed)
         {
             s3queue_settings.s3queue_enable_logging_to_s3queue_log = settings.s3queue_enable_logging_to_s3queue_log;
@@ -95,6 +96,21 @@ namespace
                             "Setting `s3queue_cleanup_interval_min_ms` ({}) must be less or equal to `s3queue_cleanup_interval_max_ms` ({})",
                             s3queue_settings.s3queue_cleanup_interval_min_ms, s3queue_settings.s3queue_cleanup_interval_max_ms);
         }
+
+        if (!s3queue_settings.s3queue_processing_threads_num)
+        {
+            throw Exception(ErrorCodes::BAD_ARGUMENTS, "Setting `s3queue_processing_threads_num` cannot be set to zero");
+        }
+
+        if (!is_attach && !s3queue_settings.s3queue_processing_threads_num.changed)
+        {
+            s3queue_settings.s3queue_processing_threads_num = std::max<uint32_t>(getNumberOfPhysicalCPUCores(), 16);
+            engine_args->settings->as<ASTSetQuery>()->changes.insertSetting(
+                "s3queue_processing_threads_num",
+                s3queue_settings.s3queue_processing_threads_num.value);
+
+            LOG_TRACE(log, "Set `processing_threads_num` to {}", s3queue_settings.s3queue_processing_threads_num);
+        }
     }
 }
 
@@ -107,7 +123,7 @@ StorageS3Queue::StorageS3Queue(
     const String & comment,
     ContextPtr context_,
     std::optional<FormatSettings> format_settings_,
-    ASTStorage * /* engine_args */,
+    ASTStorage * engine_args,
     LoadingStrictnessLevel mode)
     : IStorage(table_id_)
     , WithContext(context_)
@@ -131,7 +147,7 @@ StorageS3Queue::StorageS3Queue(
         throw Exception(ErrorCodes::QUERY_NOT_ALLOWED, "S3Queue url must either end with '/' or contain globs");
     }
 
-    checkAndAdjustSettings(*s3queue_settings, context_->getSettingsRef(), mode > LoadingStrictnessLevel::CREATE);
+    checkAndAdjustSettings(*s3queue_settings, context_->getSettingsRef(), mode > LoadingStrictnessLevel::CREATE, log, engine_args);
 
     object_storage = configuration->createObjectStorage(context_, /* is_readonly */true);
     FormatFactory::instance().checkFormatName(configuration->format);
@@ -305,10 +321,12 @@ void ReadFromS3Queue::initializePipeline(QueryPipelineBuilder & pipeline, const
     createIterator(nullptr);
     for (size_t i = 0; i < adjusted_num_streams; ++i)
         pipes.emplace_back(storage->createSource(
-                               i,
+                               i/* processor_id */,
                                info,
                                iterator,
-                               max_block_size, context));
+                               max_block_size,
+                               context,
+                               true/* commit_once_processed */));
 
     auto pipe = Pipe::unitePipes(std::move(pipes));
     if (pipe.empty())
@@ -325,7 +343,8 @@ std::shared_ptr<StorageS3QueueSource> StorageS3Queue::createSource(
     const ReadFromFormatInfo & info,
     std::shared_ptr<StorageS3Queue::FileIterator> file_iterator,
     size_t max_block_size,
-    ContextPtr local_context)
+    ContextPtr local_context,
+    bool commit_once_processed)
 {
     auto internal_source = std::make_unique<StorageObjectStorageSource>(
         getName(),
@@ -358,7 +377,12 @@ std::shared_ptr<StorageS3QueueSource> StorageS3Queue::createSource(
         table_is_being_dropped,
         s3_queue_log,
         getStorageID(),
-        log);
+        log,
+        s3queue_settings->s3queue_max_processed_files_before_commit,
+        s3queue_settings->s3queue_max_processed_rows_before_commit,
+        s3queue_settings->s3queue_max_processed_bytes_before_commit,
+        s3queue_settings->s3queue_max_processing_time_sec_before_commit,
+        commit_once_processed);
 }
 
 bool StorageS3Queue::hasDependencies(const StorageID & table_id)
@@ -433,48 +457,83 @@ void StorageS3Queue::threadFunc()
 
 bool StorageS3Queue::streamToViews()
 {
+    // Create a stream for each consumer and join them in a union stream
+    // Only insert into dependent views and expect that input blocks contain virtual columns
+
     auto table_id = getStorageID();
     auto table = DatabaseCatalog::instance().getTable(table_id, getContext());
     if (!table)
         throw Exception(ErrorCodes::LOGICAL_ERROR, "Engine table {} doesn't exist.", table_id.getNameForLogs());
 
-    auto storage_snapshot = getStorageSnapshot(getInMemoryMetadataPtr(), getContext());
-
-    // Create an INSERT query for streaming data
     auto insert = std::make_shared<ASTInsertQuery>();
     insert->table_id = table_id;
 
+    auto storage_snapshot = getStorageSnapshot(getInMemoryMetadataPtr(), getContext());
     auto s3queue_context = Context::createCopy(getContext());
     s3queue_context->makeQueryContext();
 
-    // Create a stream for each consumer and join them in a union stream
-    // Only insert into dependent views and expect that input blocks contain virtual columns
-    InterpreterInsertQuery interpreter(insert, s3queue_context, false, true, true);
-    auto block_io = interpreter.execute();
     auto file_iterator = createFileIterator(s3queue_context, nullptr);
+    size_t total_rows = 0;
 
-    auto read_from_format_info = prepareReadingFromFormat(block_io.pipeline.getHeader().getNames(), storage_snapshot, supportsSubsetOfColumns(s3queue_context));
-
-    Pipes pipes;
-    pipes.reserve(s3queue_settings->s3queue_processing_threads_num);
-    for (size_t i = 0; i < s3queue_settings->s3queue_processing_threads_num; ++i)
+    while (!shutdown_called && !file_iterator->isFinished())
     {
-        auto source = createSource(i, read_from_format_info, file_iterator, DBMS_DEFAULT_BUFFER_SIZE, s3queue_context);
-        pipes.emplace_back(std::move(source));
+        InterpreterInsertQuery interpreter(insert, s3queue_context, false, true, true);
+        auto block_io = interpreter.execute();
+        auto read_from_format_info = prepareReadingFromFormat(
+            block_io.pipeline.getHeader().getNames(),
+            storage_snapshot,
+            supportsSubsetOfColumns(s3queue_context));
+
+        Pipes pipes;
+        std::vector<std::shared_ptr<StorageS3QueueSource>> sources;
+
+        pipes.reserve(s3queue_settings->s3queue_processing_threads_num);
+        sources.reserve(s3queue_settings->s3queue_processing_threads_num);
+
+        for (size_t i = 0; i < s3queue_settings->s3queue_processing_threads_num; ++i)
+        {
+            auto source = createSource(
+                i/* processor_id */,
+                read_from_format_info,
+                file_iterator,
+                DBMS_DEFAULT_BUFFER_SIZE,
+                s3queue_context,
+                false/* commit_once_processed */);
+
+            pipes.emplace_back(source);
+            sources.emplace_back(source);
+        }
+        auto pipe = Pipe::unitePipes(std::move(pipes));
+
+        block_io.pipeline.complete(std::move(pipe));
+        block_io.pipeline.setNumThreads(s3queue_settings->s3queue_processing_threads_num);
+        block_io.pipeline.setConcurrencyControl(s3queue_context->getSettingsRef().use_concurrency_control);
+
+        std::atomic_size_t rows = 0;
+        block_io.pipeline.setProgressCallback([&](const Progress & progress) { rows += progress.read_rows.load(); });
+
+        try
+        {
+            CompletedPipelineExecutor executor(block_io.pipeline);
+            executor.execute();
+        }
+        catch (...)
+        {
+            for (auto & source : sources)
+                source->commit(/* success */false, getCurrentExceptionMessage(true));
+
+            file_iterator->releaseFinishedBuckets();
+            throw;
+        }
+
+        for (auto & source : sources)
+            source->commit(/* success */true);
+
+        file_iterator->releaseFinishedBuckets();
+        total_rows += rows;
     }
-    auto pipe = Pipe::unitePipes(std::move(pipes));
 
-    block_io.pipeline.complete(std::move(pipe));
-    block_io.pipeline.setNumThreads(s3queue_settings->s3queue_processing_threads_num);
-    block_io.pipeline.setConcurrencyControl(s3queue_context->getSettingsRef().use_concurrency_control);
-
-    std::atomic_size_t rows = 0;
-    block_io.pipeline.setProgressCallback([&](const Progress & progress) { rows += progress.read_rows.load(); });
-
-    CompletedPipelineExecutor executor(block_io.pipeline);
-    executor.execute();
-
-    return rows > 0;
+    return total_rows > 0;
 }
 
 zkutil::ZooKeeperPtr StorageS3Queue::getZooKeeper() const

src/Storages/S3Queue/StorageS3Queue.h

@@ -88,7 +88,8 @@ private:
         const ReadFromFormatInfo & info,
         std::shared_ptr<StorageS3Queue::FileIterator> file_iterator,
         size_t max_block_size,
-        ContextPtr local_context);
+        ContextPtr local_context,
+        bool commit_once_processed);
 
     bool hasDependencies(const StorageID & table_id);
     bool streamToViews();

src/Storages/System/StorageSystemS3Queue.cpp

@@ -26,6 +26,7 @@ ColumnsDescription StorageSystemS3Queue::getColumnsDescription()
     return ColumnsDescription
     {
         {"zookeeper_path", std::make_shared<DataTypeString>(), "Path in zookeeper to S3Queue metadata"},
+        {"file_path", std::make_shared<DataTypeString>(), "File path of a file which is being processed by S3Queue"},
         {"file_name", std::make_shared<DataTypeString>(), "File name of a file which is being processed by S3Queue"},
         {"rows_processed", std::make_shared<DataTypeUInt64>(), "Currently processed number of rows"},
         {"status", std::make_shared<DataTypeString>(), "Status of processing: Processed, Processing, Failed"},
@@ -45,11 +46,12 @@ void StorageSystemS3Queue::fillData(MutableColumns & res_columns, ContextPtr, co
 {
     for (const auto & [zookeeper_path, metadata] : S3QueueMetadataFactory::instance().getAll())
     {
-        for (const auto & [file_name, file_status] : metadata->getFileStatuses())
+        for (const auto & [file_path, file_status] : metadata->getFileStatuses())
         {
             size_t i = 0;
             res_columns[i++]->insert(zookeeper_path);
-            res_columns[i++]->insert(file_name);
+            res_columns[i++]->insert(file_path);
+            res_columns[i++]->insert(std::filesystem::path(file_path).filename().string());
 
             res_columns[i++]->insert(file_status->processed_rows.load());
             res_columns[i++]->insert(magic_enum::enum_name(file_status->state.load()));

tests/integration/test_storage_s3_queue/configs/merge_tree.xml

@@ -0,0 +1,5 @@
+<clickhouse>
+    <merge_tree>
+        <parts_to_throw_insert>0</parts_to_throw_insert>
+    </merge_tree>
+</clickhouse>

tests/integration/test_storage_s3_queue/test.py

@@ -110,6 +110,17 @@ def started_cluster():
             with_installed_binary=True,
             use_old_analyzer=True,
         )
+        cluster.add_instance(
+            "instance_too_many_parts",
+            user_configs=["configs/users.xml"],
+            with_minio=True,
+            with_zookeeper=True,
+            main_configs=[
+                "configs/s3queue_log.xml",
+                "configs/merge_tree.xml",
+            ],
+            stay_alive=True,
+        )
 
         logging.info("Starting cluster...")
         cluster.start()
@@ -352,6 +363,7 @@ def test_direct_select_file(started_cluster, mode):
             files_path,
             additional_settings={
                 "keeper_path": keeper_path,
+                "s3queue_processing_threads_num": 1,
             },
         )
 
@@ -379,6 +391,7 @@ def test_direct_select_file(started_cluster, mode):
         files_path,
         additional_settings={
             "keeper_path": keeper_path,
+            "s3queue_processing_threads_num": 1,
         },
     )
 
@@ -397,6 +410,7 @@ def test_direct_select_file(started_cluster, mode):
         files_path,
         additional_settings={
             "keeper_path": keeper_path,
+            "s3queue_processing_threads_num": 1,
         },
     )
 
@@ -779,8 +793,10 @@ def test_max_set_age(started_cluster):
         additional_settings={
             "keeper_path": keeper_path,
             "s3queue_tracked_file_ttl_sec": max_age,
-            "s3queue_cleanup_interval_min_ms": 0,
-            "s3queue_cleanup_interval_max_ms": 0,
+            "s3queue_cleanup_interval_min_ms": max_age / 3,
+            "s3queue_cleanup_interval_max_ms": max_age / 3,
+            "s3queue_loading_retries": 0,
+            "s3queue_processing_threads_num": 1,
             "s3queue_loading_retries": 0,
         },
     )
@@ -806,7 +822,7 @@ def test_max_set_age(started_cluster):
     assert expected_rows == get_count()
     assert 10 == int(node.query(f"SELECT uniq(_path) from {dst_table_name}"))
 
-    time.sleep(max_age + 1)
+    time.sleep(max_age + 5)
 
     expected_rows = 20
 
@@ -861,6 +877,11 @@ def test_max_set_age(started_cluster):
     assert "Cannot parse input" in node.query(
         "SELECT exception FROM system.s3queue WHERE file_name ilike '%fff.csv'"
     )
+    assert 1 == int(
+        node.query(
+            "SELECT count() FROM system.s3queue_log WHERE file_name ilike '%fff.csv'"
+        )
+    )
     assert 1 == int(
         node.query(
             "SELECT count() FROM system.s3queue_log WHERE file_name ilike '%fff.csv' AND notEmpty(exception)"
@@ -1284,7 +1305,7 @@ def test_shards_distributed(started_cluster, mode, processing_threads):
     def get_count(node, table_name):
         return int(run_query(node, f"SELECT count() FROM {table_name}"))
 
-    for _ in range(10):
+    for _ in range(30):
         if (
             get_count(node, dst_table_name) + get_count(node_2, dst_table_name)
         ) == total_rows:
@@ -1577,3 +1598,156 @@ def test_upgrade(started_cluster):
     node.restart_with_latest_version()
 
     assert expected_rows == get_count()
+
+
+def test_exception_during_insert(started_cluster):
+    node = started_cluster.instances["instance_too_many_parts"]
+
+    table_name = f"test_exception_during_insert"
+    dst_table_name = f"{table_name}_dst"
+    keeper_path = f"/clickhouse/test_{table_name}"
+    files_path = f"{table_name}_data"
+    files_to_generate = 10
+
+    create_table(
+        started_cluster,
+        node,
+        table_name,
+        "unordered",
+        files_path,
+        additional_settings={
+            "keeper_path": keeper_path,
+        },
+    )
+    total_values = generate_random_files(
+        started_cluster, files_path, files_to_generate, start_ind=0, row_num=1
+    )
+
+    create_mv(node, table_name, dst_table_name)
+
+    node.wait_for_log_line(
+        "Failed to process data: Code: 252. DB::Exception: Too many parts"
+    )
+
+    time.sleep(2)
+    exception = node.query(
+        f"SELECT exception FROM system.s3queue WHERE zookeeper_path ilike '%{table_name}%' and notEmpty(exception)"
+    )
+    assert "Too many parts" in exception
+
+    node.replace_in_config(
+        "/etc/clickhouse-server/config.d/merge_tree.xml",
+        "parts_to_throw_insert>0",
+        "parts_to_throw_insert>10",
+    )
+    node.restart_clickhouse()
+
+    def get_count():
+        return int(node.query(f"SELECT count() FROM {dst_table_name}"))
+
+    expected_rows = 10
+    for _ in range(20):
+        if expected_rows == get_count():
+            break
+        time.sleep(1)
+    assert expected_rows == get_count()
+
+
+def test_commit_on_limit(started_cluster):
+    node = started_cluster.instances["instance"]
+
+    table_name = f"test_commit_on_limit"
+    dst_table_name = f"{table_name}_dst"
+    keeper_path = f"/clickhouse/test_{table_name}"
+    files_path = f"{table_name}_data"
+    files_to_generate = 10
+
+    create_table(
+        started_cluster,
+        node,
+        table_name,
+        "ordered",
+        files_path,
+        additional_settings={
+            "keeper_path": keeper_path,
+            "s3queue_processing_threads_num": 1,
+            "s3queue_loading_retries": 0,
+            "s3queue_max_processed_files_before_commit": 10,
+        },
+    )
+    total_values = generate_random_files(
+        started_cluster, files_path, files_to_generate, start_ind=0, row_num=1
+    )
+
+    incorrect_values = [
+        ["failed", 1, 1],
+    ]
+    incorrect_values_csv = (
+        "\n".join((",".join(map(str, row)) for row in incorrect_values)) + "\n"
+    ).encode()
+
+    correct_values = [
+        [1, 1, 1],
+    ]
+    correct_values_csv = (
+        "\n".join((",".join(map(str, row)) for row in correct_values)) + "\n"
+    ).encode()
+
+    put_s3_file_content(
+        started_cluster, f"{files_path}/test_99.csv", correct_values_csv
+    )
+    put_s3_file_content(
+        started_cluster, f"{files_path}/test_999.csv", correct_values_csv
+    )
+    put_s3_file_content(
+        started_cluster, f"{files_path}/test_9999.csv", incorrect_values_csv
+    )
+    put_s3_file_content(
+        started_cluster, f"{files_path}/test_99999.csv", correct_values_csv
+    )
+    put_s3_file_content(
+        started_cluster, f"{files_path}/test_999999.csv", correct_values_csv
+    )
+
+    create_mv(node, table_name, dst_table_name)
+
+    def get_processed_files():
+        return (
+            node.query(
+                f"SELECT file_name FROM system.s3queue WHERE zookeeper_path ilike '%{table_name}%' and status = 'Processed' and rows_processed > 0 "
+            )
+            .strip()
+            .split("\n")
+        )
+
+    def get_failed_files():
+        return (
+            node.query(
+                f"SELECT file_name FROM system.s3queue WHERE zookeeper_path ilike '%{table_name}%' and status = 'Failed'"
+            )
+            .strip()
+            .split("\n")
+        )
+
+    for _ in range(30):
+        if "test_999999.csv" in get_processed_files():
+            break
+        time.sleep(1)
+    assert "test_999999.csv" in get_processed_files()
+
+    assert 1 == int(
+        node.query(
+            "SELECT value FROM system.events WHERE name = 'S3QueueFailedFiles' SETTINGS system_events_show_zero_values=1"
+        )
+    )
+
+    expected_processed = ["test_" + str(i) + ".csv" for i in range(files_to_generate)]
+    processed = get_processed_files()
+    for value in expected_processed:
+        assert value in processed
+
+    expected_failed = ["test_9999.csv"]
+    failed = get_failed_files()
+    for value in expected_failed:
+        assert value not in processed
+        assert value in failed