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4996 Commits

Author SHA1 Message Date
kssenii
559c696230 Fix 2022-09-14 20:35:28 +02:00
mateng0915
372a0b7794 added events into s3 integration test 2022-09-14 19:19:47 +08:00
alesapin
51a302a70f
Merge branch 'master' into revert-40968-s3-sharding-2 2022-09-14 11:53:14 +02:00
Antonio Andelic
36f46891dd
Merge pull request #41215 from ClickHouse/keeper-close-connection-on-shutdown 
Close sessions on Keeper shutdown
 2022-09-13 19:09:34 +02:00
kssenii
420ac4eb43 s3 header auth in ast 2022-09-13 15:13:28 +02:00
Antonio Andelic
baf7255cff
Merge pull request #39976 from ClickHouse/keeper-storage 
KeeperMap storage engine
 2022-09-13 14:15:09 +02:00
Alexander Tokmakov
4d146b05a9
Merge pull request #38262 from PolyProgrammist/fix-ordinary-system-unfreeze 
Fix SYSTEM UNFREEZE for ordinary database
 2022-09-13 14:55:11 +03:00
alesapin
9af591a328
Revert "Sharding s3 key names (2)" 2022-09-13 12:29:02 +02:00
Antonio Andelic
45cde90219 Fix test 2022-09-13 09:51:31 +00:00
Sergei Trifonov
9cd78585c3 fix tests 2022-09-13 00:12:40 +02:00
Robert Schulze
fac1be9700
chore: restore SYSTEM RELOAD MODEL(S) and moniting view SYSTEM.MODELS 
- This commit restores statements "SYSTEM RELOAD MODEL(S)" which provide
  a mechanism to update a model explicitly. It also saves potentially
  unnecessary reloads of a model from disk after it's initial load.

  To keep the complexity low, the semantics of "SYSTEM RELOAD MODEL(S)
  was changed from eager to lazy. This means that both statements
  previously immedately reloaded the specified/all models, whereas now
  the statements only trigger an unload and the first call to
  catboostEvaluate() does the actual load.

- Monitoring view SYSTEM.MODELS is also restored but with some obsolete
  fields removed. The view was not documented in the past and for now it
  remains undocumented. The commit is thus not considered a breach of
  ClickHouse's public interface.
 2022-09-12 19:33:02 +00:00
Azat Khuzhin
b698a4ff65 Apply changes to http handlers on fly without server restart 
This has been implemented by simply restarting http servers in case of
http_handlers directive in configuration xml had been changed.

But, for this I have to change the handlers interface to accept
configuration separatelly, since the configuration that contains in the
server is the configuration with which server had been started.

Signed-off-by: Azat Khuzhin <a.khuzhin@semrush.com>
Co-authored-by: Antonio Andelic
 2022-09-12 17:34:51 +02:00
Antonio Andelic
deee0d639f Address PR comments 2022-09-12 14:43:52 +00:00
Sergei Trifonov
fe88a7991d
Merge branch 'master' into readonly-settings-allow 2022-09-12 16:20:40 +02:00
Antonio Andelic
1cd43d8e5c Merge branch 'master' into keeper-storage 2022-09-12 13:42:51 +00:00
Antonio Andelic
e985ee3354 Close sessions on Keeper shutdown 2022-09-12 12:22:48 +00:00
kssenii
02c3d8b0a0 Fix 2022-09-11 16:42:56 +02:00
Alexey Milovidov
5802c2fdd2
Merge pull request #40713 from ClickHouse/remove-useless-line 
Remove one line from XML, because we do not care
 2022-09-11 09:53:30 +03:00
Alexey Milovidov
a5388affb8
Merge pull request #41023 from ClickHouse/remove-trash-3 
Remove trash from config
 2022-09-11 09:52:45 +03:00
Alexey Milovidov
91338ea771
Merge branch 'master' into remove-useless-line 2022-09-11 02:03:39 +03:00
Azat Khuzhin
46eafb4732 tests: skip test_send_crash_reports under ASan 
Since it also does not fits into timeouts [1]:

    2022-09-08 21:16:20 [ 377 ] DEBUG : Command:['docker', 'exec', '-u', 'root', 'roottestsendcrashreports_node_1', 'bash', '-c', 'pkill -SEGV clickhouse'] (cluster.py:95, run_and_check)
    ...
    2022-09-08 21:16:22 [ 377 ] DEBUG : run container_id:roottestsendcrashreports_node_1 detach:False nothrow:False cmd: ['cat', '/result.txt'] (cluster.py:1744, exec_in_container)
    ...
    2022-09-08 21:16:36 [ 377 ] DEBUG : Stdout:INITIAL_STATE (cluster.py:103, run_and_check)

And server logs:

    2022.09.08 21:16:21.112076 [ 228 ] {} <Fatal> BaseDaemon: ########################################
    2022.09.08 21:16:21.112170 [ 228 ] {} <Fatal> BaseDaemon: (version 22.9.1.1, build id: 0F7336E0A4D64134C51C8365DADCB78A9B39AA3B) (from thread 1) (no query) Received signal Segmentation fault (11)
    2022.09.08 21:16:21.112244 [ 228 ] {} <Fatal> BaseDaemon: Address: 0xde Access: read. Unknown si_code.
    2022.09.08 21:16:21.112321 [ 228 ] {} <Fatal> BaseDaemon: Stack trace: 0x7fbe21d09376 0x40a4f71a 0xe293a4b 0xdc5c51a 0x38dee227 0xdc326a0 0x38e319d9 0xdc2b4e2 0xdc25fdb 0x7fbe21b2c083 0xdb636ae
    2022.09.08 21:16:21.112419 [ 228 ] {} <Fatal> BaseDaemon: 3. pthread_cond_wait @ 0x7fbe21d09376 in ?
    2022.09.08 21:16:21.122914 [ 228 ] {} <Fatal> BaseDaemon: 4. ./build_docker/../contrib/libcxx/src/condition_variable.cpp:0: std::__1::condition_variable::wait(std::__1::unique_lock<std::__1::mutex>&) @ 0x40a4f71a in /usr/bin/clickhouse
    2022.09.08 21:16:21.233016 [ 228 ] {} <Fatal> BaseDaemon: 5.1. inlined from ./build_docker/../contrib/libcxx/include/atomic:952: unsigned long std::__1::__cxx_atomic_load<unsigned long>(std::__1::__cxx_atomic_base_impl<unsigned long> const*, std::__1::memory_order)
    2022.09.08 21:16:21.233135 [ 228 ] {} <Fatal> BaseDaemon: 5.2. inlined from ../contrib/libcxx/include/atomic:1582: std::__1::__atomic_base<unsigned long, false>::load(std::__1::memory_order) const
    2022.09.08 21:16:21.233183 [ 228 ] {} <Fatal> BaseDaemon: 5.3. inlined from ../contrib/libcxx/include/atomic:1586: std::__1::__atomic_base<unsigned long, false>::operator unsigned long() const
    2022.09.08 21:16:21.233234 [ 228 ] {} <Fatal> BaseDaemon: 5.4. inlined from ../src/Daemon/BaseDaemon.cpp:967: operator()
    2022.09.08 21:16:21.233303 [ 228 ] {} <Fatal> BaseDaemon: 5.5. inlined from ../contrib/libcxx/include/__mutex_base:402: void std::__1::condition_variable::wait<BaseDaemon::waitForTerminationRequest()::$_0>(std::__1::unique_lock<std::__1::mutex>&, BaseDaemon::waitForTerminationRequest()::$_0)
    2022.09.08 21:16:21.233334 [ 228 ] {} <Fatal> BaseDaemon: 5. ../src/Daemon/BaseDaemon.cpp:967: BaseDaemon::waitForTerminationRequest() @ 0xe293a4b in /usr/bin/clickhouse
    2022.09.08 21:16:21.350675 [ 228 ] {} <Fatal> BaseDaemon: 6. ./build_docker/../programs/server/Server.cpp:0: DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > > > const&) @ 0xdc5c51a in /usr/bin/clickhouse
    2022.09.08 21:16:21.394092 [ 228 ] {} <Fatal> BaseDaemon: 7. ./build_docker/../contrib/poco/Util/src/Application.cpp:0: Poco::Util::Application::run() @ 0x38dee227 in /usr/bin/clickhouse
    2022.09.08 21:16:21.654195 [ 228 ] {} <Fatal> BaseDaemon: 8. ./build_docker/../programs/server/Server.cpp:466: DB::Server::run() @ 0xdc326a0 in /usr/bin/clickhouse
    2022.09.08 21:16:21.666991 [ 228 ] {} <Fatal> BaseDaemon: 9. ./build_docker/../contrib/poco/Util/src/ServerApplication.cpp:0: Poco::Util::ServerApplication::run(int, char**) @ 0x38e319d9 in /usr/bin/clickhouse
    2022.09.08 21:16:21.916078 [ 228 ] {} <Fatal> BaseDaemon: 10. ./build_docker/../programs/server/Server.cpp:0: mainEntryClickHouseServer(int, char**) @ 0xdc2b4e2 in /usr/bin/clickhouse
    2022.09.08 21:16:21.929922 [ 228 ] {} <Fatal> BaseDaemon: 11. ./build_docker/../programs/main.cpp:0: main @ 0xdc25fdb in /usr/bin/clickhouse
    2022.09.08 21:16:21.929981 [ 228 ] {} <Fatal> BaseDaemon: 12. __libc_start_main @ 0x7fbe21b2c083 in ?
    2022.09.08 21:16:30.357032 [ 228 ] {} <Fatal> BaseDaemon: 13. _start @ 0xdb636ae in /usr/bin/clickhouse
    2022.09.08 21:16:31.383233 [ 228 ] {} <Fatal> BaseDaemon: Integrity check of the executable skipped because the reference checksum could not be read. (calculated checksum: 6200AC7C1270DC293DF3302E1C64399B)
    ...
    2022.09.08 21:16:40.564453 [ 228 ] {} <Information> SentryWriter: Sending crash report

  [1]: https://s3.amazonaws.com/clickhouse-test-reports/41046/a0b85eaca8d4003c9fbc4571b30830d30f1984e9/integration_tests__asan__[3/3].html

Though another option is to increase waiting time.

Signed-off-by: Azat Khuzhin <a.khuzhin@semrush.com>
 2022-09-10 21:38:35 +02:00
robot-clickhouse
5bc2845e49 Automatic style fix 2022-09-10 03:17:34 +00:00
Alexey Milovidov
f2227e125f Fix test 2022-09-10 05:11:09 +02:00
Alexey Milovidov
61278c81e4 Merge branch 'master' into remove-useless-line 2022-09-10 05:07:10 +02:00
robot-clickhouse
79ccce23e9 Automatic style fix 2022-09-09 20:09:54 +00:00
Igor Nikonov
dbfb448290 Fix: integration test, standalone keeper mode 
There is logic regarding which keeper binary use to start keeper cluster in an integration test
There 2 options:
(1) standalone keeper binary (expected binary name clickhouse-keeper)
(2) clickhouse binary with keeper inside

Fixed:
- option (1) didn't work since docker_compose_keeper.yaml didn't create
target clickhouse-keeper at all
- if clickhouse-keeper existed, option (1) was taken but
  clickhouse-keeper could be just a link to clickhouse binary (the link
  is created always during build if cmake option BUILD_STANDALONE_KEEPER is OFF)
 2022-09-09 14:51:34 +00:00
robot-clickhouse
aeac3916ef Automatic style fix 2022-09-09 12:27:13 +00:00
Antonio Andelic
32483aeec8 Merge branch 'master' into keeper-storage 2022-09-09 12:24:01 +00:00
Sergei Trifonov
76eb001e78 add test for changeable_in_readonly + fix SQL in docs 2022-09-09 14:01:29 +02:00
Alexander Tokmakov
48927ba0ac
Merge branch 'master' into no-hardlinks-while-making-backup-of-mergetree-in-atomic-db 2022-09-09 14:24:44 +03:00
Vitaly Baranov
10629a66e5 Fix black. 2022-09-08 20:58:51 +02:00
Vitaly Baranov
e48cd2b6f6 Add more test cases. 2022-09-08 18:14:25 +02:00
robot-clickhouse
807b09f6b0 Automatic style fix 2022-09-08 15:52:00 +00:00
Sergei Trifonov
f92b6a6176
Merge branch 'master' into readonly-settings-allow 2022-09-08 17:44:32 +02:00
Sergei Trifonov
62541ab764 fix more tests and clang tidy build 2022-09-08 17:43:09 +02:00
Antonio Andelic
b99996961d Address PR comments 2022-09-08 12:45:36 +00:00
Vitaly Baranov
122009a2bd Use table lock if database is ordinary and zero-copy-replication is enabled. 2022-09-08 13:54:59 +02:00
Robert Schulze
c16707ff00
chore: delete obsolete modelEvaluate() function + SYSTEM.MODELS view 
- The deleted function modelEvaluate() was superseded by
  catboostEvaluate().

- Also delete the external model repository, as modelEvaluate() was it's
  last user. Additionally remove the system view SYSTEM.MODELS for
  inspecting the repository.

- SYSTEM RELOAD MODELS is also obsolete. HOWEVER, it was retained and
  made a no-op instead of deleted.

  Why?
  The reason is that RBAC in distributed setups works by storing
  privileges (granted and revoked) as plain SQL statements in Keeper.
  Nodes read these statements at startup and parse them. If a privilege
  for SYSTEM RELOAD MODELS exists but parser doesn't recognize it
  nodes would fail to come up.

  Considered but rejected alternatives:
  - Ignore SYSTEM RELOAD MODELS during parsing RBAC privileges and
    return an error for regular SYSTEM RELOAD MODELS SQL. Special-case
    of no-op behavior, too brittle.
  - Remove SYSTEM RELOAD MODELS manually from Keeper via command-line
    manipulation of Keeper nodes or via SQL by dropping the privileges.
    Needs user intervention during upgrade.
 2022-09-08 09:10:11 +00:00
Robert Schulze
60f9f6855d
feat: implement catboost in library-bridge 
This commit moves the catboost model evaluation out of the server
process into the library-bridge binary. This serves two goals: On the
one hand, crashes / memory corruptions of the catboost library no longer
affect the server. On the other hand, we can forbid loading dynamic
libraries in the server (catboost was the last consumer of this
functionality), thus improving security.

SQL syntax:

  SELECT
    catboostEvaluate('/path/to/model.bin', FEAT_1, ..., FEAT_N) > 0 AS prediction,
    ACTION AS target
  FROM amazon_train
  LIMIT 10

Required configuration:

  <catboost_lib_path>/path/to/libcatboostmodel.so</catboost_lib_path>

*** Implementation Details ***

The internal protocol between the server and the library-bridge is
simple:

- HTTP GET on path "/extdict_ping":
  A ping, used during the handshake to check if the library-bridge runs.

- HTTP POST on path "extdict_request"
  (1) Send a "catboost_GetTreeCount" request from the server to the
      bridge, containing a library path (e.g /home/user/libcatboost.so) and
      a model path (e.g. /home/user/model.bin). Rirst, this unloads the
      catboost library handler associated to the model path (if it was
      loaded), then loads the catboost library handler associated to the
      model path, then executes GetTreeCount() on the library handler and
      finally sends the result back to the server. Step (1) is called once
      by the server from FunctionCatBoostEvaluate::getReturnTypeImpl(). The
      library path handler is unloaded in the beginning because it contains
      state which may no longer be valid if the user runs
      catboost("/path/to/model.bin", ...) more than once and if "model.bin"
      was updated in between.
  (2) Send "catboost_Evaluate" from the server to the bridge, containing
      the model path and the features to run the interference on. Step (2)
      is called multiple times (once per chunk) by the server from function
      FunctionCatBoostEvaluate::executeImpl(). The library handler for the
      given model path is expected to be already loaded by Step (1).

Fixes #27870
 2022-09-08 09:01:32 +00:00
Vitaly Baranov
31ed722572
Merge pull request #41044 from vitlibar/more-conventional-conversion-yaml-to-xmk 
More conventional conversion yaml to xml
 2022-09-07 13:46:32 +02:00
Vitaly Baranov
9c847ceec9 No hardlinks while making backup of MergeTree in atomic database. 2022-09-07 11:44:50 +02:00
Vitaly Baranov
63e992d52d Edit test configs. 2022-09-06 17:09:26 +02:00
Sergei Trifonov
6217559175
Merge branch 'master' into readonly-settings-allow 2022-09-06 16:10:48 +02:00
Antonio Andelic
5eb034a920 Merge branch 'master' into start-embedded-keeper-async 2022-09-06 12:14:47 +00:00
Antonio Andelic
4a68bfef39 Fix tests with async Keeper start 2022-09-06 12:12:17 +00:00
Sergei Trifonov
f77809ddbc
Merge pull request #40900 from ClickHouse/s3-detailed-metrics 
S3 detailed metrics
 2022-09-06 13:20:57 +02:00
Anton Ivashkin
e91d22a5b7 Merge branch 'fix-ordinary-system-unfreeze' of github.com:PolyProgrammist/ClickHouse into fix-ordinary-system-unfreeze 2022-09-06 12:18:05 +03:00
Anton Ivashkin
5e7cf1f238 Fix test_merge_tree_s3/test.py::test_freeze_system_unfreeze[node] 2022-09-06 12:14:40 +03:00
Alexey Milovidov
59bd94dcf8
Merge pull request #40975 from vitlibar/fix-access-rights-for-describe 
Fix access rights for DESCRIBE TABLE
 2022-09-06 02:38:34 +03:00
Alexey Milovidov
4c30dbc905
Merge pull request #40968 from ClickHouse/s3-sharding-2 
Sharding s3 key names (2)
 2022-09-05 22:47:25 +03:00
ianton-ru
39e1fc7a0f
Merge branch 'master' into fix-ordinary-system-unfreeze 2022-09-05 17:10:59 +03:00
Sergei Trifonov
1c247308f1
Merge branch 'master' into s3-detailed-metrics 2022-09-05 15:55:41 +02:00
Sergei Trifonov
225773634c fix integration test for profile events s3 2022-09-05 15:54:28 +02:00
Kseniia Sumarokova
cff1dd6a8e
Merge branch 'master' into move-strange-test 2022-09-05 15:19:57 +02:00
Antonio Andelic
e07539d1b9 Merge branch 'master' into keeper-storage 2022-09-05 09:54:13 +00:00
Antonio Andelic
3a0581e990
Merge pull request #40543 from Lloyd-Pottiger/feat/support-read-only-for-embeddedrocksdb 
Add read-only support for EmbeddedRocksDB
 2022-09-05 09:31:07 +02:00
Alexey Milovidov
cda8052df0 Fix trash 2022-09-05 03:46:10 +02:00
Alexey Milovidov
e70d526896 Fix trash 2022-09-05 03:35:43 +02:00
Alexey Milovidov
bff96b0af6
Merge branch 'master' into fix-access-rights-for-describe 2022-09-05 04:34:57 +03:00
Alexey Milovidov
cc50aa39a2 Merge branch 's3-sharding-2' of github.com:ClickHouse/ClickHouse into s3-sharding-2 2022-09-05 02:25:01 +02:00
Alexey Milovidov
79e3723272 Merge branch 'master' into s3-sharding-2 2022-09-05 02:24:35 +02:00
robot-clickhouse
89d40b6f70 Automatic style fix 2022-09-05 00:23:36 +00:00
Alexey Milovidov
a0b5567d3e Move strange test 2022-09-05 02:16:48 +02:00
Alexey Milovidov
007680d93f Preparation 2022-09-05 02:13:51 +02:00
Vitaly Baranov
6c164905ca Add test. 2022-09-04 18:57:51 +02:00
Alexey Milovidov
c4adc9ed8f Remove trash 2022-09-04 04:28:08 +02:00
Alexey Milovidov
13a129bee7 Merge branch 'master' into remove-useless-line 2022-09-04 03:24:40 +02:00
Lloyd-Pottiger
ec68ed8a93 fix test 
Signed-off-by: Lloyd-Pottiger <yan1579196623@gamil.com>
 2022-09-03 10:44:07 +08:00
Sergei Trifonov
005b2588d8
Merge branch 'master' into readonly-settings-allow 2022-09-02 16:37:43 +02:00
Lloyd-Pottiger
b76af9284e style check 
Signed-off-by: Lloyd-Pottiger <yan1579196623@gamil.com>
 2022-09-02 19:29:57 +08:00
Lloyd-Pottiger
f499381f57 move functional test to integration test 
Signed-off-by: Lloyd-Pottiger <yan1579196623@gamil.com>
 2022-09-02 18:45:37 +08:00
Antonio Andelic
9ca20b97c2
Merge branch 'master' into keeper-storage 2022-09-02 12:13:07 +02:00
Lloyd-Pottiger
5a6b2106b5 Merge branch 'master' of github.com:ClickHouse/ClickHouse into feat/support-read-only-for-embeddedrocksdb 2022-09-02 18:10:00 +08:00
robot-clickhouse
46f74fcbaf Automatic style fix 2022-09-02 07:49:09 +00:00
Antonio Andelic
b02bf49939 Use path prefix 2022-09-02 07:34:26 +00:00
Lloyd-Pottiger
59dccd6e49 fix test 
Signed-off-by: Lloyd-Pottiger <yan1579196623@gamil.com>
 2022-09-02 11:14:49 +08:00
Sergei Trifonov
7fec55eea4 work in progress 2022-09-02 04:12:05 +02:00
Frank Chen
9d63cbe811 Merge 'origin/master' into tracing_context_propagation to resolve conflicts 2022-09-01 23:18:59 +08:00
Vitaly Baranov
6dcca686cb
Merge pull request #40827 from vitlibar/fix-incremental-backups-for-log-family 
Fix incremental backups for Log family.
 2022-09-01 13:13:32 +02:00
Sema Checherinda
7b59fdc042
Merge pull request #40779 from CheSema/detached-parts-metric 
Metric for the number of detached parts
 2022-09-01 12:24:42 +02:00
Vitaly Baranov
007ae0e6cc Fix incremental backups for Log family. 2022-08-31 12:57:28 +02:00
Antonio Andelic
9dd1a9859d Merge branch 'master' into keeper-storage 2022-08-31 10:12:11 +00:00
root
ea517de61a style check correction 2022-08-30 23:20:19 -03:00
root
f02f7ce99c addressed minor change requests 2022-08-30 23:20:19 -03:00
root
84a617675d style check correction in test.py 2022-08-30 23:20:19 -03:00
root
3ced3c9933 style check correction in test.py 2022-08-30 23:20:19 -03:00
root
1d29a494db Modified test code to cover various scenarios for custom keys 2022-08-30 23:20:19 -03:00
root
d5db88fa27 Structured-logging-custom-keys PR init 2022-08-30 23:20:19 -03:00
Sema Checherinda
9bb4f556c3 work on remarks on the review 2022-08-30 20:18:35 +02:00
Antonio Andelic
3c098bd0cb Add integration test for KeeperMap 2022-08-30 13:41:57 +00:00
Alexander Tokmakov
022f440ad0
Merge pull request #40769 from arthurpassos/caresptrresolver-hosts-patch 
Fix CaresPTRResolver not reading hosts file
 2022-08-30 14:35:10 +03:00
alesapin
2588901bc9
Merge pull request #40780 from ClickHouse/add_cache_to_zero_copy_test 
Add cache to zero copy replication test
 2022-08-30 12:42:05 +02:00
Kseniia Sumarokova
c88db2ef97
Merge pull request #40751 from kssenii/fix-mysql-timeouts 
Fix issue with mysql db / table function timeouts
 2022-08-30 11:59:01 +02:00
Frank Chen
f17d56b528 Merge branch 'master' into tracing_context_propagation 2022-08-30 14:24:36 +08:00
Sema Checherinda
e436b4f4cc Metric for the number of detached parts 2022-08-30 02:12:57 +02:00
alesapin
ac41de73df Add cache to zero copy replication test 2022-08-30 00:17:01 +02:00
Kseniia Sumarokova
8001560082
Fix test 2022-08-30 00:14:00 +02:00
Vitaly Baranov
33f72fb011
Merge pull request #40060 from ClickHouse/vitlibar-increase-timeout-for-test_concurrent_backups 
Increase timeout for test_concurrent_backups
 2022-08-29 22:25:56 +02:00
Arthur Passos
dd49b44abb Fix host_regexp hosts file tst 2022-08-29 15:58:18 -03:00
Arthur Passos
961365c7a4 Fix CaresPTRResolver not reading hosts file 2022-08-29 15:11:39 -03:00