--- slug: /en/operations/allocation-profiling sidebar_label: "Allocation profiling" title: "Allocation profiling" --- import Tabs from '@theme/Tabs'; import TabItem from '@theme/TabItem'; # Allocation profiling ClickHouse uses [jemalloc](https://github.com/jemalloc/jemalloc) as its global allocator that comes with some tools for allocation sampling and profiling. To make allocation profiling more convenient, `SYSTEM` commands are provided along 4LW commands in Keeper. ## Sampling allocations and flushing heap profiles If we want to sample and profile allocations in `jemalloc`, we need to start ClickHouse/Keeper with profiling enabled using environment variable `MALLOC_CONF`. ```sh MALLOC_CONF=background_thread:true,prof:true ``` `jemalloc` will sample allocation and store the information internally. We can tell `jemalloc` to flush current profile by running: SYSTEM JEMALLOC FLUSH PROFILE echo jmfp | nc localhost 9181 By default, heap profile file will be generated in `/tmp/jemalloc_clickhouse._pid_._seqnum_.heap` where `_pid_` is the PID of ClickHouse and `_seqnum_` is the global sequence number for the current heap profile. For Keeper, the default file is `/tmp/jemalloc_keeper._pid_._seqnum_.heap` following the same rules. A different location can be defined by appending the `MALLOC_CONF` environment variable with `prof_prefix` option. For example, if we want to generate profiles in `/data` folder where the prefix for filename will be `my_current_profile` we can run ClickHouse/Keeper with following environment variable: ```sh MALLOC_CONF=background_thread:true,prof:true,prof_prefix:/data/my_current_profile ``` Generated file will append to prefix PID and sequence number. ## Analyzing heap profiles After we generated heap profiles, we need to analyze them. For that, we need to use `jemalloc`'s tool called [jeprof](https://github.com/jemalloc/jemalloc/blob/dev/bin/jeprof.in) which can be installed in multiple ways: - installing `jemalloc` using system's package manager - cloning [jemalloc repo](https://github.com/jemalloc/jemalloc) and running autogen.sh from the root folder that will provide you with `jeprof` script inside the `bin` folder :::note `jeprof` uses `addr2line` to generate stacktraces which can be really slow. If that’s the case, we recommend installing an [alternative implementation](https://github.com/gimli-rs/addr2line) of the tool. ``` git clone https://github.com/gimli-rs/addr2line.git --depth=1 --branch=0.23.0 cd addr2line cargo build --features bin --release cp ./target/release/addr2line path/to/current/addr2line ``` ::: There are many different formats to generate from the heap profile using `jeprof`. We recommend to run `jeprof --help` to check usage and many different options the tool provides. In general, `jeprof` command will look like this: ```sh jeprof path/to/binary path/to/heap/profile --output_format [ > output_file] ``` If we want to compare which allocations happened between 2 profiles we can set the base argument: ```sh jeprof path/to/binary --base path/to/first/heap/profile path/to/second/heap/profile --output_format [ > output_file] ``` For example: - if we want to generate a text file with each procedure written per line: ```sh jeprof path/to/binary path/to/heap/profile --text > result.txt ``` - if we want to generate a PDF file with call-graph: ```sh jeprof path/to/binary path/to/heap/profile --pdf > result.pdf ``` ### Generating flame graph `jeprof` allows us to generate collapsed stacks for building flame graphs. We need to use `--collapsed` argument: ```sh jeprof path/to/binary path/to/heap/profile --collapsed > result.collapsed ``` After that, we can use many different tools to visualize collapsed stacks. Most popular would be [FlameGraph](https://github.com/brendangregg/FlameGraph) which contains a script called `flamegraph.pl`: ```sh cat result.collapsed | /path/to/FlameGraph/flamegraph.pl --color=mem --title="Allocation Flame Graph" --width 2400 > result.svg ``` Another interesting tool is [speedscope](https://www.speedscope.app/) that allows you to analyze collected stacks in a more interactive way. ## Controlling allocation profiler during runtime If ClickHouse/Keeper were started with enabled profiler, they support additional commands for disabling/enabling allocation profiling during runtime. Using those commands, it's easier to profile only specific intervals. Disable profiler: SYSTEM JEMALLOC DISABLE PROFILE echo jmdp | nc localhost 9181 Enable profiler: SYSTEM JEMALLOC ENABLE PROFILE echo jmep | nc localhost 9181 It's also possible to control the initial state of the profiler by setting `prof_active` option which is enabled by default. For example, if we don't want to sample allocations during startup but only after we enable the profiler, we can start ClickHouse/Keeper with following environment variable: ```sh MALLOC_CONF=background_thread:true,prof:true,prof_active:false ``` and enable profiler at a later point. ## Additional options for profiler `jemalloc` has many different options available related to profiler which can be controlled by modifying `MALLOC_CONF` environment variable. For example, interval between allocation samples can be controlled with `lg_prof_sample`. If you want to dump heap profile every N bytes you can enable it using `lg_prof_interval`. We recommend to check `jemalloc`s [reference page](https://jemalloc.net/jemalloc.3.html) for such options. ## Other resources ClickHouse/Keeper expose `jemalloc` related metrics in many different ways. :::warning Warning It's important to be aware that none of these metrics are synchronized with each other and values may drift. ::: ### System table `asynchronous_metrics` ```sql SELECT * FROM system.asynchronous_metrics WHERE metric ILIKE '%jemalloc%' FORMAT Vertical ``` [Reference](/en/operations/system-tables/asynchronous_metrics) ### System table `jemalloc_bins` Contains information about memory allocations done via jemalloc allocator in different size classes (bins) aggregated from all arenas. [Reference](/en/operations/system-tables/jemalloc_bins) ### Prometheus All `jemalloc` related metrics from `asynchronous_metrics` are also exposed using Prometheus endpoint in both ClickHouse and Keeper. [Reference](/en/operations/server-configuration-parameters/settings#prometheus) ### `jmst` 4LW command in Keeper Keeper supports `jmst` 4LW command which returns [basic allocator statistics](https://github.com/jemalloc/jemalloc/wiki/Use-Case%3A-Basic-Allocator-Statistics). Example: ```sh echo jmst | nc localhost 9181 ```