#include #include namespace DB { namespace ErrorCodes { extern const int LOGICAL_ERROR; } namespace { constexpr auto DATA_FILE_EXTENSION = ".bin"; constexpr auto INDEX_FILE_EXTENSION = ".idx"; } IMergedBlockOutputStream::IMergedBlockOutputStream( MergeTreeData & storage_, const String & part_path_, size_t min_compress_block_size_, size_t max_compress_block_size_, CompressionCodecPtr codec_, size_t aio_threshold_, bool blocks_are_granules_size_, const std::vector & indices_to_recalc, const MergeTreeIndexGranularity & index_granularity_, const MergeTreeIndexGranularityInfo * index_granularity_info_) : storage(storage_) , part_path(part_path_) , min_compress_block_size(min_compress_block_size_) , max_compress_block_size(max_compress_block_size_) , aio_threshold(aio_threshold_) , can_use_adaptive_granularity(index_granularity_info_ ? index_granularity_info_->is_adaptive : storage.canUseAdaptiveGranularity()) , marks_file_extension(can_use_adaptive_granularity ? getAdaptiveMrkExtension() : getNonAdaptiveMrkExtension()) , blocks_are_granules_size(blocks_are_granules_size_) , index_granularity(index_granularity_) , compute_granularity(index_granularity.empty()) , codec(std::move(codec_)) , skip_indices(indices_to_recalc) , with_final_mark(storage.getSettings()->write_final_mark && can_use_adaptive_granularity) { if (blocks_are_granules_size && !index_granularity.empty()) throw Exception("Can't take information about index granularity from blocks, when non empty index_granularity array specified", ErrorCodes::LOGICAL_ERROR); } void IMergedBlockOutputStream::addStreams( const String & path, const String & name, const IDataType & type, const CompressionCodecPtr & effective_codec, size_t estimated_size, bool skip_offsets) { IDataType::StreamCallback callback = [&] (const IDataType::SubstreamPath & substream_path) { if (skip_offsets && !substream_path.empty() && substream_path.back().type == IDataType::Substream::ArraySizes) return; String stream_name = IDataType::getFileNameForStream(name, substream_path); /// Shared offsets for Nested type. if (column_streams.count(stream_name)) return; column_streams[stream_name] = std::make_unique( stream_name, path + stream_name, DATA_FILE_EXTENSION, path + stream_name, marks_file_extension, effective_codec, max_compress_block_size, estimated_size, aio_threshold); }; IDataType::SubstreamPath stream_path; type.enumerateStreams(callback, stream_path); } IDataType::OutputStreamGetter IMergedBlockOutputStream::createStreamGetter( const String & name, WrittenOffsetColumns & offset_columns, bool skip_offsets) { return [&, skip_offsets] (const IDataType::SubstreamPath & substream_path) -> WriteBuffer * { bool is_offsets = !substream_path.empty() && substream_path.back().type == IDataType::Substream::ArraySizes; if (is_offsets && skip_offsets) return nullptr; String stream_name = IDataType::getFileNameForStream(name, substream_path); /// Don't write offsets more than one time for Nested type. if (is_offsets && offset_columns.count(stream_name)) return nullptr; return &column_streams[stream_name]->compressed; }; } void fillIndexGranularityImpl( const Block & block, size_t index_granularity_bytes, size_t fixed_index_granularity_rows, bool blocks_are_granules, size_t index_offset, MergeTreeIndexGranularity & index_granularity, bool can_use_adaptive_index_granularity) { size_t rows_in_block = block.rows(); size_t index_granularity_for_block; if (!can_use_adaptive_index_granularity) index_granularity_for_block = fixed_index_granularity_rows; else { size_t block_size_in_memory = block.bytes(); if (blocks_are_granules) index_granularity_for_block = rows_in_block; else if (block_size_in_memory >= index_granularity_bytes) { size_t granules_in_block = block_size_in_memory / index_granularity_bytes; index_granularity_for_block = rows_in_block / granules_in_block; } else { size_t size_of_row_in_bytes = block_size_in_memory / rows_in_block; index_granularity_for_block = index_granularity_bytes / size_of_row_in_bytes; } } if (index_granularity_for_block == 0) /// very rare case when index granularity bytes less then single row index_granularity_for_block = 1; /// We should be less or equal than fixed index granularity index_granularity_for_block = std::min(fixed_index_granularity_rows, index_granularity_for_block); for (size_t current_row = index_offset; current_row < rows_in_block; current_row += index_granularity_for_block) index_granularity.appendMark(index_granularity_for_block); } void IMergedBlockOutputStream::fillIndexGranularity(const Block & block) { const auto storage_settings = storage.getSettings(); fillIndexGranularityImpl( block, storage_settings->index_granularity_bytes, storage_settings->index_granularity, blocks_are_granules_size, index_offset, index_granularity, can_use_adaptive_granularity); } void IMergedBlockOutputStream::writeSingleMark( const String & name, const IDataType & type, WrittenOffsetColumns & offset_columns, bool skip_offsets, size_t number_of_rows, DB::IDataType::SubstreamPath & path) { type.enumerateStreams([&] (const IDataType::SubstreamPath & substream_path) { bool is_offsets = !substream_path.empty() && substream_path.back().type == IDataType::Substream::ArraySizes; if (is_offsets && skip_offsets) return; String stream_name = IDataType::getFileNameForStream(name, substream_path); /// Don't write offsets more than one time for Nested type. if (is_offsets && offset_columns.count(stream_name)) return; ColumnStream & stream = *column_streams[stream_name]; /// There could already be enough data to compress into the new block. if (stream.compressed.offset() >= min_compress_block_size) stream.compressed.next(); writeIntBinary(stream.plain_hashing.count(), stream.marks); writeIntBinary(stream.compressed.offset(), stream.marks); if (can_use_adaptive_granularity) writeIntBinary(number_of_rows, stream.marks); }, path); } size_t IMergedBlockOutputStream::writeSingleGranule( const String & name, const IDataType & type, const IColumn & column, WrittenOffsetColumns & offset_columns, bool skip_offsets, IDataType::SerializeBinaryBulkStatePtr & serialization_state, IDataType::SerializeBinaryBulkSettings & serialize_settings, size_t from_row, size_t number_of_rows, bool write_marks) { if (write_marks) writeSingleMark(name, type, offset_columns, skip_offsets, number_of_rows, serialize_settings.path); type.serializeBinaryBulkWithMultipleStreams(column, from_row, number_of_rows, serialize_settings, serialization_state); /// So that instead of the marks pointing to the end of the compressed block, there were marks pointing to the beginning of the next one. type.enumerateStreams([&] (const IDataType::SubstreamPath & substream_path) { bool is_offsets = !substream_path.empty() && substream_path.back().type == IDataType::Substream::ArraySizes; if (is_offsets && skip_offsets) return; String stream_name = IDataType::getFileNameForStream(name, substream_path); /// Don't write offsets more than one time for Nested type. if (is_offsets && offset_columns.count(stream_name)) return; column_streams[stream_name]->compressed.nextIfAtEnd(); }, serialize_settings.path); return from_row + number_of_rows; } /// column must not be empty. (column.size() !== 0) std::pair IMergedBlockOutputStream::writeColumn( const String & name, const IDataType & type, const IColumn & column, WrittenOffsetColumns & offset_columns, bool skip_offsets, IDataType::SerializeBinaryBulkStatePtr & serialization_state, size_t from_mark) { auto & settings = storage.global_context.getSettingsRef(); IDataType::SerializeBinaryBulkSettings serialize_settings; serialize_settings.getter = createStreamGetter(name, offset_columns, skip_offsets); serialize_settings.low_cardinality_max_dictionary_size = settings.low_cardinality_max_dictionary_size; serialize_settings.low_cardinality_use_single_dictionary_for_part = settings.low_cardinality_use_single_dictionary_for_part != 0; size_t total_rows = column.size(); size_t current_row = 0; size_t current_column_mark = from_mark; while (current_row < total_rows) { size_t rows_to_write; bool write_marks = true; /// If there is `index_offset`, then the first mark goes not immediately, but after this number of rows. if (current_row == 0 && index_offset != 0) { write_marks = false; rows_to_write = index_offset; } else { if (index_granularity.getMarksCount() <= current_column_mark) throw Exception( "Incorrect size of index granularity expect mark " + toString(current_column_mark) + " totally have marks " + toString(index_granularity.getMarksCount()), ErrorCodes::LOGICAL_ERROR); rows_to_write = index_granularity.getMarkRows(current_column_mark); } current_row = writeSingleGranule( name, type, column, offset_columns, skip_offsets, serialization_state, serialize_settings, current_row, rows_to_write, write_marks ); if (write_marks) current_column_mark++; } /// Memoize offsets for Nested types, that are already written. They will not be written again for next columns of Nested structure. type.enumerateStreams([&] (const IDataType::SubstreamPath & substream_path) { bool is_offsets = !substream_path.empty() && substream_path.back().type == IDataType::Substream::ArraySizes; if (is_offsets) { String stream_name = IDataType::getFileNameForStream(name, substream_path); offset_columns.insert(stream_name); } }, serialize_settings.path); return std::make_pair(current_column_mark, current_row - total_rows); } void IMergedBlockOutputStream::writeFinalMark( const std::string & column_name, const DataTypePtr column_type, WrittenOffsetColumns & offset_columns, bool skip_offsets, DB::IDataType::SubstreamPath & path) { writeSingleMark(column_name, *column_type, offset_columns, skip_offsets, 0, path); /// Memoize information about offsets column_type->enumerateStreams([&] (const IDataType::SubstreamPath & substream_path) { bool is_offsets = !substream_path.empty() && substream_path.back().type == IDataType::Substream::ArraySizes; if (is_offsets) { String stream_name = IDataType::getFileNameForStream(column_name, substream_path); offset_columns.insert(stream_name); } }, path); } void IMergedBlockOutputStream::initSkipIndices() { for (const auto & index : skip_indices) { String stream_name = index->getFileName(); skip_indices_streams.emplace_back( std::make_unique( stream_name, part_path + stream_name, INDEX_FILE_EXTENSION, part_path + stream_name, marks_file_extension, codec, max_compress_block_size, 0, aio_threshold)); skip_indices_aggregators.push_back(index->createIndexAggregator()); skip_index_filling.push_back(0); } } void IMergedBlockOutputStream::calculateAndSerializeSkipIndices( const ColumnsWithTypeAndName & skip_indexes_columns, size_t rows) { /// Creating block for update Block indices_update_block(skip_indexes_columns); size_t skip_index_current_data_mark = 0; /// Filling and writing skip indices like in IMergedBlockOutputStream::writeColumn for (size_t i = 0; i < skip_indices.size(); ++i) { const auto index = skip_indices[i]; auto & stream = *skip_indices_streams[i]; size_t prev_pos = 0; skip_index_current_data_mark = skip_index_data_mark; while (prev_pos < rows) { UInt64 limit = 0; if (prev_pos == 0 && index_offset != 0) { limit = index_offset; } else { limit = index_granularity.getMarkRows(skip_index_current_data_mark); if (skip_indices_aggregators[i]->empty()) { skip_indices_aggregators[i] = index->createIndexAggregator(); skip_index_filling[i] = 0; if (stream.compressed.offset() >= min_compress_block_size) stream.compressed.next(); writeIntBinary(stream.plain_hashing.count(), stream.marks); writeIntBinary(stream.compressed.offset(), stream.marks); /// Actually this numbers is redundant, but we have to store them /// to be compatible with normal .mrk2 file format if (can_use_adaptive_granularity) writeIntBinary(1UL, stream.marks); } /// this mark is aggregated, go to the next one skip_index_current_data_mark++; } size_t pos = prev_pos; skip_indices_aggregators[i]->update(indices_update_block, &pos, limit); if (pos == prev_pos + limit) { ++skip_index_filling[i]; /// write index if it is filled if (skip_index_filling[i] == index->granularity) { skip_indices_aggregators[i]->getGranuleAndReset()->serializeBinary(stream.compressed); skip_index_filling[i] = 0; } } prev_pos = pos; } } skip_index_data_mark = skip_index_current_data_mark; } void IMergedBlockOutputStream::finishSkipIndicesSerialization( MergeTreeData::DataPart::Checksums & checksums) { for (size_t i = 0; i < skip_indices.size(); ++i) { auto & stream = *skip_indices_streams[i]; if (!skip_indices_aggregators[i]->empty()) skip_indices_aggregators[i]->getGranuleAndReset()->serializeBinary(stream.compressed); } for (auto & stream : skip_indices_streams) { stream->finalize(); stream->addToChecksums(checksums); } skip_indices_streams.clear(); skip_indices_aggregators.clear(); skip_index_filling.clear(); } /// Implementation of IMergedBlockOutputStream::ColumnStream. IMergedBlockOutputStream::ColumnStream::ColumnStream( const String & escaped_column_name_, const String & data_path_, const std::string & data_file_extension_, const std::string & marks_path_, const std::string & marks_file_extension_, const CompressionCodecPtr & compression_codec_, size_t max_compress_block_size_, size_t estimated_size_, size_t aio_threshold_) : escaped_column_name(escaped_column_name_), data_file_extension{data_file_extension_}, marks_file_extension{marks_file_extension_}, plain_file(createWriteBufferFromFileBase(data_path_ + data_file_extension, estimated_size_, aio_threshold_, max_compress_block_size_)), plain_hashing(*plain_file), compressed_buf(plain_hashing, compression_codec_), compressed(compressed_buf), marks_file(marks_path_ + marks_file_extension, 4096, O_TRUNC | O_CREAT | O_WRONLY), marks(marks_file) { } void IMergedBlockOutputStream::ColumnStream::finalize() { compressed.next(); plain_file->next(); marks.next(); } void IMergedBlockOutputStream::ColumnStream::sync() { plain_file->sync(); marks_file.sync(); } void IMergedBlockOutputStream::ColumnStream::addToChecksums(MergeTreeData::DataPart::Checksums & checksums) { String name = escaped_column_name; checksums.files[name + data_file_extension].is_compressed = true; checksums.files[name + data_file_extension].uncompressed_size = compressed.count(); checksums.files[name + data_file_extension].uncompressed_hash = compressed.getHash(); checksums.files[name + data_file_extension].file_size = plain_hashing.count(); checksums.files[name + data_file_extension].file_hash = plain_hashing.getHash(); checksums.files[name + marks_file_extension].file_size = marks.count(); checksums.files[name + marks_file_extension].file_hash = marks.getHash(); } }