#include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #define MERGE_TREE_MARK_SIZE (2 * sizeof(UInt64)) namespace DB { namespace ErrorCodes { extern const int FILE_DOESNT_EXIST; extern const int NO_FILE_IN_DATA_PART; extern const int EXPECTED_END_OF_FILE; extern const int CORRUPTED_DATA; extern const int NOT_FOUND_EXPECTED_DATA_PART; extern const int BAD_SIZE_OF_FILE_IN_DATA_PART; } static ReadBufferFromFile openForReading(const String & path) { return ReadBufferFromFile(path, std::min(static_cast(DBMS_DEFAULT_BUFFER_SIZE), Poco::File(path).getSize())); } void MergeTreeDataPart::MinMaxIndex::load(const MergeTreeData & data, const String & part_path) { size_t minmax_idx_size = data.minmax_idx_column_types.size(); parallelogram.reserve(minmax_idx_size); for (size_t i = 0; i < minmax_idx_size; ++i) { String file_name = part_path + "minmax_" + escapeForFileName(data.minmax_idx_columns[i]) + ".idx"; ReadBufferFromFile file = openForReading(file_name); const DataTypePtr & type = data.minmax_idx_column_types[i]; Field min_val; type->deserializeBinary(min_val, file); Field max_val; type->deserializeBinary(max_val, file); parallelogram.emplace_back(min_val, true, max_val, true); } initialized = true; } void MergeTreeDataPart::MinMaxIndex::store(const MergeTreeData & data, const String & part_path, Checksums & out_checksums) const { store(data.minmax_idx_columns, data.minmax_idx_column_types, part_path, out_checksums); } void MergeTreeDataPart::MinMaxIndex::store(const Names & column_names, const DataTypes & data_types, const String & part_path, Checksums & out_checksums) const { if (!initialized) throw Exception("Attempt to store uninitialized MinMax index for part " + part_path + ". This is a bug.", ErrorCodes::LOGICAL_ERROR); for (size_t i = 0; i < column_names.size(); ++i) { String file_name = "minmax_" + escapeForFileName(column_names[i]) + ".idx"; const DataTypePtr & type = data_types.at(i); WriteBufferFromFile out(part_path + file_name); HashingWriteBuffer out_hashing(out); type->serializeBinary(parallelogram[i].left, out_hashing); type->serializeBinary(parallelogram[i].right, out_hashing); out_hashing.next(); out_checksums.files[file_name].file_size = out_hashing.count(); out_checksums.files[file_name].file_hash = out_hashing.getHash(); } } void MergeTreeDataPart::MinMaxIndex::update(const Block & block, const Names & column_names) { if (!initialized) parallelogram.reserve(column_names.size()); for (size_t i = 0; i < column_names.size(); ++i) { Field min_value; Field max_value; const ColumnWithTypeAndName & column = block.getByName(column_names[i]); column.column->getExtremes(min_value, max_value); if (!initialized) parallelogram.emplace_back(min_value, true, max_value, true); else { parallelogram[i].left = std::min(parallelogram[i].left, min_value); parallelogram[i].right = std::max(parallelogram[i].right, max_value); } } initialized = true; } void MergeTreeDataPart::MinMaxIndex::merge(const MinMaxIndex & other) { if (!other.initialized) return; if (!initialized) { parallelogram = other.parallelogram; initialized = true; } else { for (size_t i = 0; i < parallelogram.size(); ++i) { parallelogram[i].left = std::min(parallelogram[i].left, other.parallelogram[i].left); parallelogram[i].right = std::max(parallelogram[i].right, other.parallelogram[i].right); } } } MergeTreeDataPart::MergeTreeDataPart(MergeTreeData & storage_, const String& path_, const String & name_) ///@TODO_IGR DO check is fromPartName need to use path : storage(storage_), full_path(path_), name(name_), info(MergeTreePartInfo::fromPartName(name_, storage.format_version)) { } /// Takes into account the fact that several columns can e.g. share their .size substreams. /// When calculating totals these should be counted only once. MergeTreeDataPart::ColumnSize MergeTreeDataPart::getColumnSizeImpl( const String & column_name, const IDataType & type, std::unordered_set * processed_substreams) const { ColumnSize size; if (checksums.empty()) return size; type.enumerateStreams([&](const IDataType::SubstreamPath & substream_path) { String file_name = IDataType::getFileNameForStream(column_name, substream_path); if (processed_substreams && !processed_substreams->insert(file_name).second) return; auto bin_checksum = checksums.files.find(file_name + ".bin"); if (bin_checksum != checksums.files.end()) { size.data_compressed += bin_checksum->second.file_size; size.data_uncompressed += bin_checksum->second.uncompressed_size; } auto mrk_checksum = checksums.files.find(file_name + ".mrk"); if (mrk_checksum != checksums.files.end()) size.marks += mrk_checksum->second.file_size; }, {}); return size; } MergeTreeDataPart::ColumnSize MergeTreeDataPart::getColumnSize(const String & column_name, const IDataType & type) const { return getColumnSizeImpl(column_name, type, nullptr); } MergeTreeDataPart::ColumnSize MergeTreeDataPart::getTotalColumnsSize() const { ColumnSize totals; std::unordered_set processed_substreams; for (const NameAndTypePair & column : columns) { ColumnSize size = getColumnSizeImpl(column.name, *column.type, &processed_substreams); totals.add(size); } return totals; } size_t MergeTreeDataPart::getFileSizeOrZero(const String & file_name) const { auto checksum = checksums.files.find(file_name); if (checksum == checksums.files.end()) return 0; return checksum->second.file_size; } /** Returns the name of a column with minimum compressed size (as returned by getColumnSize()). * If no checksums are present returns the name of the first physically existing column. */ String MergeTreeDataPart::getColumnNameWithMinumumCompressedSize() const { const auto & storage_columns = storage.getColumns().getAllPhysical(); const std::string * minimum_size_column = nullptr; UInt64 minimum_size = std::numeric_limits::max(); for (const auto & column : storage_columns) { if (!hasColumnFiles(column.name)) continue; const auto size = getColumnSize(column.name, *column.type).data_compressed; if (size < minimum_size) { minimum_size = size; minimum_size_column = &column.name; } } if (!minimum_size_column) throw Exception("Could not find a column of minimum size in MergeTree, part " + getFullPath(), ErrorCodes::LOGICAL_ERROR); return *minimum_size_column; } String MergeTreeDataPart::getFullPath() const { if (relative_path.empty()) throw Exception("Part relative_path cannot be empty. This is bug.", ErrorCodes::LOGICAL_ERROR); return full_path + relative_path + "/"; } String MergeTreeDataPart::getNameWithPrefix() const { String res = Poco::Path(relative_path).getFileName(); if (res.empty()) throw Exception("relative_path " + relative_path + " of part " + name + " is invalid or not set", ErrorCodes::LOGICAL_ERROR); return res; } String MergeTreeDataPart::getNewName(const MergeTreePartInfo & new_part_info) const { if (storage.format_version < MERGE_TREE_DATA_MIN_FORMAT_VERSION_WITH_CUSTOM_PARTITIONING) { /// NOTE: getting min and max dates from the part name (instead of part data) because we want /// the merged part name be determined only by source part names. /// It is simpler this way when the real min and max dates for the block range can change /// (e.g. after an ALTER DELETE command). DayNum min_date; DayNum max_date; MergeTreePartInfo::parseMinMaxDatesFromPartName(name, min_date, max_date); return new_part_info.getPartNameV0(min_date, max_date); } else return new_part_info.getPartName(); } DayNum MergeTreeDataPart::getMinDate() const { if (storage.minmax_idx_date_column_pos != -1 && minmax_idx.initialized) return DayNum(minmax_idx.parallelogram[storage.minmax_idx_date_column_pos].left.get()); else return DayNum(); } DayNum MergeTreeDataPart::getMaxDate() const { if (storage.minmax_idx_date_column_pos != -1 && minmax_idx.initialized) return DayNum(minmax_idx.parallelogram[storage.minmax_idx_date_column_pos].right.get()); else return DayNum(); } time_t MergeTreeDataPart::getMinTime() const { if (storage.minmax_idx_time_column_pos != -1 && minmax_idx.initialized) return minmax_idx.parallelogram[storage.minmax_idx_time_column_pos].left.get(); else return 0; } time_t MergeTreeDataPart::getMaxTime() const { if (storage.minmax_idx_time_column_pos != -1 && minmax_idx.initialized) return minmax_idx.parallelogram[storage.minmax_idx_time_column_pos].right.get(); else return 0; } MergeTreeDataPart::~MergeTreeDataPart() { if (is_temp) { try { std::string path = getFullPath(); Poco::File dir(path); if (!dir.exists()) return; if (!startsWith(getNameWithPrefix(), "tmp")) { LOG_ERROR(storage.log, "~DataPart() should remove part " << path << " but its name doesn't start with tmp. Too suspicious, keeping the part."); return; } dir.remove(true); } catch (...) { tryLogCurrentException(__PRETTY_FUNCTION__); } } } UInt64 MergeTreeDataPart::calculateTotalSizeOnDisk(const String & from) { Poco::File cur(from); if (cur.isFile()) return cur.getSize(); std::vector files; cur.list(files); UInt64 res = 0; for (const auto & file : files) res += calculateTotalSizeOnDisk(from + file); return res; } void MergeTreeDataPart::remove() const { if (relative_path.empty()) throw Exception("Part relative_path cannot be empty. This is bug.", ErrorCodes::LOGICAL_ERROR); /** Atomic directory removal: * - rename directory to temporary name; * - remove it recursive. * * For temporary name we use "delete_tmp_" prefix. * * NOTE: We cannot use "tmp_delete_" prefix, because there is a second thread, * that calls "clearOldTemporaryDirectories" and removes all directories, that begin with "tmp_" and are old enough. * But when we removing data part, it can be old enough. And rename doesn't change mtime. * And a race condition can happen that will lead to "File not found" error here. */ String from = full_path + relative_path; String to = full_path + "delete_tmp_" + name; Poco::File from_dir{from}; Poco::File to_dir{to}; if (to_dir.exists()) { LOG_WARNING(storage.log, "Directory " << to << " (to which part must be renamed before removing) already exists." " Most likely this is due to unclean restart. Removing it."); try { to_dir.remove(true); } catch (...) { LOG_ERROR(storage.log, "Cannot remove directory " << to << ". Check owner and access rights."); throw; } } try { from_dir.renameTo(to); } catch (const Poco::FileNotFoundException &) { LOG_ERROR(storage.log, "Directory " << from << " (part to remove) doesn't exist or one of nested files has gone." " Most likely this is due to manual removing. This should be discouraged. Ignoring."); return; } to_dir.remove(true); } void MergeTreeDataPart::renameTo(const String & new_relative_path, bool remove_new_dir_if_exists) const { String from = getFullPath(); String to = full_path + new_relative_path + "/"; Poco::File from_file(from); if (!from_file.exists()) throw Exception("Part directory " + from + " doesn't exist. Most likely it is logical error.", ErrorCodes::FILE_DOESNT_EXIST); Poco::File to_file(to); if (to_file.exists()) { if (remove_new_dir_if_exists) { Names files; Poco::File(from).list(files); LOG_WARNING(storage.log, "Part directory " << to << " already exists" << " and contains " << files.size() << " files. Removing it."); to_file.remove(true); } else { throw Exception("part directory " + to + " already exists", ErrorCodes::DIRECTORY_ALREADY_EXISTS); } } from_file.setLastModified(Poco::Timestamp::fromEpochTime(time(nullptr))); from_file.renameTo(to); relative_path = new_relative_path; } String MergeTreeDataPart::getRelativePathForDetachedPart(const String & prefix) const { String res; unsigned try_no = 0; auto dst_name = [&, this] { return "detached/" + prefix + name + (try_no ? "_try" + DB::toString(try_no) : ""); }; /** If you need to detach a part, and directory into which we want to rename it already exists, * we will rename to the directory with the name to which the suffix is added in the form of "_tryN". * This is done only in the case of `to_detached`, because it is assumed that in this case the exact name does not matter. * No more than 10 attempts are made so that there are not too many junk directories left. */ while (try_no < 10) { res = dst_name(); if (!Poco::File(full_path + res).exists()) return res; LOG_WARNING(storage.log, "Directory " << dst_name() << " (to detach to) is already exist." " Will detach to directory with '_tryN' suffix."); ++try_no; } return res; } void MergeTreeDataPart::renameToDetached(const String & prefix) const { renameTo(getRelativePathForDetachedPart(prefix)); } void MergeTreeDataPart::makeCloneInDetached(const String & prefix) const { Poco::Path src(getFullPath()); Poco::Path dst(full_path + getRelativePathForDetachedPart(prefix)); ///@TODO_IGR ASK What about another path? /// Backup is not recursive (max_level is 0), so do not copy inner directories localBackup(src, dst, 0); } void MergeTreeDataPart::loadColumnsChecksumsIndexes(bool require_columns_checksums, bool check_consistency) { /// Memory should not be limited during ATTACH TABLE query. /// This is already true at the server startup but must be also ensured for manual table ATTACH. /// Motivation: memory for index is shared between queries - not belong to the query itself. auto temporarily_disable_memory_tracker = getCurrentMemoryTrackerActionLock(); loadColumns(require_columns_checksums); loadChecksums(require_columns_checksums); loadIndex(); loadRowsCount(); /// Must be called after loadIndex() as it uses the value of `marks_count`. loadPartitionAndMinMaxIndex(); if (check_consistency) checkConsistency(require_columns_checksums); } void MergeTreeDataPart::loadIndex() { if (!marks_count) { if (columns.empty()) throw Exception("No columns in part " + name, ErrorCodes::NO_FILE_IN_DATA_PART); marks_count = Poco::File(getFullPath() + escapeForFileName(columns.front().name) + ".mrk") .getSize() / MERGE_TREE_MARK_SIZE; } size_t key_size = storage.primary_key_columns.size(); if (key_size) { MutableColumns loaded_index; loaded_index.resize(key_size); for (size_t i = 0; i < key_size; ++i) { loaded_index[i] = storage.primary_key_data_types[i]->createColumn(); loaded_index[i]->reserve(marks_count); } String index_path = getFullPath() + "primary.idx"; ReadBufferFromFile index_file = openForReading(index_path); for (size_t i = 0; i < marks_count; ++i) //-V756 for (size_t j = 0; j < key_size; ++j) storage.primary_key_data_types[j]->deserializeBinary(*loaded_index[j], index_file); for (size_t i = 0; i < key_size; ++i) { loaded_index[i]->protect(); if (loaded_index[i]->size() != marks_count) throw Exception("Cannot read all data from index file " + index_path + "(expected size: " + toString(marks_count) + ", read: " + toString(loaded_index[i]->size()) + ")", ErrorCodes::CANNOT_READ_ALL_DATA); } if (!index_file.eof()) throw Exception("Index file " + index_path + " is unexpectedly long", ErrorCodes::EXPECTED_END_OF_FILE); index.assign(std::make_move_iterator(loaded_index.begin()), std::make_move_iterator(loaded_index.end())); } } void MergeTreeDataPart::loadPartitionAndMinMaxIndex() { if (storage.format_version < MERGE_TREE_DATA_MIN_FORMAT_VERSION_WITH_CUSTOM_PARTITIONING) { DayNum min_date; DayNum max_date; MergeTreePartInfo::parseMinMaxDatesFromPartName(name, min_date, max_date); const auto & date_lut = DateLUT::instance(); partition = MergeTreePartition(date_lut.toNumYYYYMM(min_date)); minmax_idx = MinMaxIndex(min_date, max_date); } else { String path = getFullPath(); partition.load(storage, path); if (!isEmpty()) minmax_idx.load(storage, path); } String calculated_partition_id = partition.getID(storage.partition_key_sample); if (calculated_partition_id != info.partition_id) throw Exception( "While loading part " + getFullPath() + ": calculated partition ID: " + calculated_partition_id + " differs from partition ID in part name: " + info.partition_id, ErrorCodes::CORRUPTED_DATA); } void MergeTreeDataPart::loadChecksums(bool require) { String path = getFullPath() + "checksums.txt"; Poco::File checksums_file(path); if (checksums_file.exists()) { ReadBufferFromFile file = openForReading(path); if (checksums.read(file)) { assertEOF(file); bytes_on_disk = checksums.getTotalSizeOnDisk(); } else bytes_on_disk = calculateTotalSizeOnDisk(getFullPath()); } else { if (require) throw Exception("No checksums.txt in part " + name, ErrorCodes::NO_FILE_IN_DATA_PART); bytes_on_disk = calculateTotalSizeOnDisk(getFullPath()); } } void MergeTreeDataPart::loadRowsCount() { if (marks_count == 0) { rows_count = 0; } else if (storage.format_version >= MERGE_TREE_DATA_MIN_FORMAT_VERSION_WITH_CUSTOM_PARTITIONING) { String path = getFullPath() + "count.txt"; if (!Poco::File(path).exists()) throw Exception("No count.txt in part " + name, ErrorCodes::NO_FILE_IN_DATA_PART); ReadBufferFromFile file = openForReading(path); readIntText(rows_count, file); assertEOF(file); } else { size_t rows_approx = storage.index_granularity * marks_count; for (const NameAndTypePair & column : columns) { ColumnPtr column_col = column.type->createColumn(); if (!column_col->isFixedAndContiguous() || column_col->lowCardinality()) continue; size_t column_size = getColumnSize(column.name, *column.type).data_uncompressed; if (!column_size) continue; size_t sizeof_field = column_col->sizeOfValueIfFixed(); rows_count = column_size / sizeof_field; if (column_size % sizeof_field != 0) { throw Exception( "Uncompressed size of column " + column.name + "(" + toString(column_size) + ") is not divisible by the size of value (" + toString(sizeof_field) + ")", ErrorCodes::LOGICAL_ERROR); } if (!(rows_count <= rows_approx && rows_approx < rows_count + storage.index_granularity)) throw Exception( "Unexpected size of column " + column.name + ": " + toString(rows_count) + " rows, expected " + toString(rows_approx) + "+-" + toString(storage.index_granularity) + " rows according to the index", ErrorCodes::LOGICAL_ERROR); return; } throw Exception("Data part doesn't contain fixed size column (even Date column)", ErrorCodes::LOGICAL_ERROR); } } void MergeTreeDataPart::accumulateColumnSizes(ColumnToSize & column_to_size) const { std::shared_lock part_lock(columns_lock); for (const NameAndTypePair & name_type : storage.getColumns().getAllPhysical()) { IDataType::SubstreamPath path; name_type.type->enumerateStreams([&](const IDataType::SubstreamPath & substream_path) { Poco::File bin_file(getFullPath() + IDataType::getFileNameForStream(name_type.name, substream_path) + ".bin"); if (bin_file.exists()) column_to_size[name_type.name] += bin_file.getSize(); }, path); } } void MergeTreeDataPart::loadColumns(bool require) { String path = getFullPath() + "columns.txt"; if (!Poco::File(path).exists()) { if (require) throw Exception("No columns.txt in part " + name, ErrorCodes::NO_FILE_IN_DATA_PART); /// If there is no file with a list of columns, write it down. for (const NameAndTypePair & column : storage.getColumns().getAllPhysical()) if (Poco::File(getFullPath() + escapeForFileName(column.name) + ".bin").exists()) columns.push_back(column); if (columns.empty()) throw Exception("No columns in part " + name, ErrorCodes::NO_FILE_IN_DATA_PART); { WriteBufferFromFile out(path + ".tmp", 4096); columns.writeText(out); } Poco::File(path + ".tmp").renameTo(path); return; } ReadBufferFromFile file = openForReading(path); columns.readText(file); } void MergeTreeDataPart::checkConsistency(bool require_part_metadata) { String path = getFullPath(); if (!checksums.empty()) { if (!storage.primary_key_columns.empty() && !checksums.files.count("primary.idx")) throw Exception("No checksum for primary.idx", ErrorCodes::NO_FILE_IN_DATA_PART); if (require_part_metadata) { for (const NameAndTypePair & name_type : columns) { IDataType::SubstreamPath stream_path; name_type.type->enumerateStreams([&](const IDataType::SubstreamPath & substream_path) { String file_name = IDataType::getFileNameForStream(name_type.name, substream_path); String mrk_file_name = file_name + ".mrk"; String bin_file_name = file_name + ".bin"; if (!checksums.files.count(mrk_file_name)) throw Exception("No " + mrk_file_name + " file checksum for column " + name_type.name + " in part " + path, ErrorCodes::NO_FILE_IN_DATA_PART); if (!checksums.files.count(bin_file_name)) throw Exception("No " + bin_file_name + " file checksum for column " + name_type.name + " in part " + path, ErrorCodes::NO_FILE_IN_DATA_PART); }, stream_path); } } if (storage.format_version >= MERGE_TREE_DATA_MIN_FORMAT_VERSION_WITH_CUSTOM_PARTITIONING) { if (!checksums.files.count("count.txt")) throw Exception("No checksum for count.txt", ErrorCodes::NO_FILE_IN_DATA_PART); if (storage.partition_key_expr && !checksums.files.count("partition.dat")) throw Exception("No checksum for partition.dat", ErrorCodes::NO_FILE_IN_DATA_PART); if (!isEmpty()) { for (const String & col_name : storage.minmax_idx_columns) { if (!checksums.files.count("minmax_" + escapeForFileName(col_name) + ".idx")) throw Exception("No minmax idx file checksum for column " + col_name, ErrorCodes::NO_FILE_IN_DATA_PART); } } } checksums.checkSizes(path); } else { auto check_file_not_empty = [&path](const String & file_path) { Poco::File file(file_path); if (!file.exists() || file.getSize() == 0) throw Exception("Part " + path + " is broken: " + file_path + " is empty", ErrorCodes::BAD_SIZE_OF_FILE_IN_DATA_PART); return file.getSize(); }; /// Check that the primary key index is not empty. if (!storage.primary_key_columns.empty()) check_file_not_empty(path + "primary.idx"); if (storage.format_version >= MERGE_TREE_DATA_MIN_FORMAT_VERSION_WITH_CUSTOM_PARTITIONING) { check_file_not_empty(path + "count.txt"); if (storage.partition_key_expr) check_file_not_empty(path + "partition.dat"); for (const String & col_name : storage.minmax_idx_columns) check_file_not_empty(path + "minmax_" + escapeForFileName(col_name) + ".idx"); } /// Check that all marks are nonempty and have the same size. std::optional marks_size; for (const NameAndTypePair & name_type : columns) { name_type.type->enumerateStreams([&](const IDataType::SubstreamPath & substream_path) { Poco::File file(IDataType::getFileNameForStream(name_type.name, substream_path) + ".mrk"); /// Missing file is Ok for case when new column was added. if (file.exists()) { UInt64 file_size = file.getSize(); if (!file_size) throw Exception("Part " + path + " is broken: " + file.path() + " is empty.", ErrorCodes::BAD_SIZE_OF_FILE_IN_DATA_PART); if (!marks_size) marks_size = file_size; else if (file_size != *marks_size) throw Exception("Part " + path + " is broken: marks have different sizes.", ErrorCodes::BAD_SIZE_OF_FILE_IN_DATA_PART); } }); } } } bool MergeTreeDataPart::hasColumnFiles(const String & column) const { /// NOTE: For multi-streams columns we check that just first file exist. /// That's Ok under assumption that files exist either for all or for no streams. String prefix = getFullPath(); String escaped_column = escapeForFileName(column); return Poco::File(prefix + escaped_column + ".bin").exists() && Poco::File(prefix + escaped_column + ".mrk").exists(); } UInt64 MergeTreeDataPart::getIndexSizeInBytes() const { UInt64 res = 0; for (const ColumnPtr & column : index) res += column->byteSize(); return res; } UInt64 MergeTreeDataPart::getIndexSizeInAllocatedBytes() const { UInt64 res = 0; for (const ColumnPtr & column : index) res += column->allocatedBytes(); return res; } String MergeTreeDataPart::stateToString(MergeTreeDataPart::State state) { switch (state) { case State::Temporary: return "Temporary"; case State::PreCommitted: return "PreCommitted"; case State::Committed: return "Committed"; case State::Outdated: return "Outdated"; case State::Deleting: return "Deleting"; } __builtin_unreachable(); } String MergeTreeDataPart::stateString() const { return stateToString(state); } void MergeTreeDataPart::assertState(const std::initializer_list & affordable_states) const { if (!checkState(affordable_states)) { String states_str; for (auto affordable_state : affordable_states) states_str += stateToString(affordable_state) + " "; throw Exception("Unexpected state of part " + getNameWithState() + ". Expected: " + states_str, ErrorCodes::NOT_FOUND_EXPECTED_DATA_PART); } } }