ClickHouse/src/Storages/StorageMergeTree.cpp

1370 lines
50 KiB
C++

#include "StorageMergeTree.h"
#include <Databases/IDatabase.h>
#include <Common/escapeForFileName.h>
#include <Common/typeid_cast.h>
#include <Common/FieldVisitors.h>
#include <Common/ThreadPool.h>
#include <Interpreters/InterpreterAlterQuery.h>
#include <Interpreters/PartLog.h>
#include <Interpreters/MutationsInterpreter.h>
#include <Interpreters/Context.h>
#include <Parsers/ASTCheckQuery.h>
#include <Parsers/ASTFunction.h>
#include <Parsers/ASTLiteral.h>
#include <Parsers/ASTPartition.h>
#include <Parsers/ASTSetQuery.h>
#include <Parsers/queryToString.h>
#include <Storages/MergeTree/MergeTreeData.h>
#include <Storages/MergeTree/ActiveDataPartSet.h>
#include <Storages/AlterCommands.h>
#include <Storages/PartitionCommands.h>
#include <Storages/MergeTree/MergeTreeBlockOutputStream.h>
#include <Disks/StoragePolicy.h>
#include <Storages/MergeTree/MergeList.h>
#include <Storages/MergeTree/checkDataPart.h>
#include <Processors/Pipe.h>
#include <optional>
namespace DB
{
namespace ErrorCodes
{
extern const int NOT_IMPLEMENTED;
extern const int LOGICAL_ERROR;
extern const int NOT_ENOUGH_SPACE;
extern const int ABORTED;
extern const int BAD_ARGUMENTS;
extern const int INCORRECT_DATA;
extern const int CANNOT_ASSIGN_OPTIMIZE;
}
namespace ActionLocks
{
extern const StorageActionBlockType PartsMerge;
extern const StorageActionBlockType PartsTTLMerge;
extern const StorageActionBlockType PartsMove;
}
StorageMergeTree::StorageMergeTree(
const StorageID & table_id_,
const String & relative_data_path_,
const StorageInMemoryMetadata & metadata_,
bool attach,
Context & context_,
const String & date_column_name,
const MergingParams & merging_params_,
std::unique_ptr<MergeTreeSettings> storage_settings_,
bool has_force_restore_data_flag)
: MergeTreeData(
table_id_,
relative_data_path_,
metadata_,
context_,
date_column_name,
merging_params_,
std::move(storage_settings_),
false, /// require_part_metadata
attach)
, reader(*this)
, writer(*this)
, merger_mutator(*this, global_context.getBackgroundPool().getNumberOfThreads())
{
loadDataParts(has_force_restore_data_flag);
if (!attach && !getDataParts().empty())
throw Exception("Data directory for table already containing data parts - probably it was unclean DROP table or manual intervention. You must either clear directory by hand or use ATTACH TABLE instead of CREATE TABLE if you need to use that parts.", ErrorCodes::INCORRECT_DATA);
increment.set(getMaxBlockNumber());
loadMutations();
}
void StorageMergeTree::startup()
{
clearOldPartsFromFilesystem();
/// Temporary directories contain incomplete results of merges (after forced restart)
/// and don't allow to reinitialize them, so delete each of them immediately
clearOldTemporaryDirectories(0);
/// NOTE background task will also do the above cleanups periodically.
time_after_previous_cleanup.restart();
try
{
auto & merge_pool = global_context.getBackgroundPool();
merging_mutating_task_handle = merge_pool.createTask([this] { return mergeMutateTask(); });
/// Ensure that thread started only after assignment to 'merging_mutating_task_handle' is done.
merge_pool.startTask(merging_mutating_task_handle);
if (areBackgroundMovesNeeded())
{
auto & move_pool = global_context.getBackgroundMovePool();
moving_task_handle = move_pool.createTask([this] { return movePartsTask(); });
move_pool.startTask(moving_task_handle);
}
}
catch (...)
{
/// Exception safety: failed "startup" does not require a call to "shutdown" from the caller.
/// And it should be able to safely destroy table after exception in "startup" method.
/// It means that failed "startup" must not create any background tasks that we will have to wait.
try
{
shutdown();
}
catch (...)
{
std::terminate();
}
/// Note: after failed "startup", the table will be in a state that only allows to destroy the object.
throw;
}
}
void StorageMergeTree::shutdown()
{
if (shutdown_called)
return;
shutdown_called = true;
/// Unlock all waiting mutations
{
std::lock_guard<std::mutex> lock(mutation_wait_mutex);
mutation_wait_event.notify_all();
}
merger_mutator.merges_blocker.cancelForever();
parts_mover.moves_blocker.cancelForever();
if (merging_mutating_task_handle)
global_context.getBackgroundPool().removeTask(merging_mutating_task_handle);
if (moving_task_handle)
global_context.getBackgroundMovePool().removeTask(moving_task_handle);
try
{
/// We clear all old parts after stopping all background operations.
/// It's important, because background operations can produce temporary
/// parts which will remove themselves in their descrutors. If so, we
/// may have race condition between our remove call and background
/// process.
clearOldPartsFromFilesystem(true);
}
catch (...)
{
/// Example: the case of readonly filesystem, we have failure removing old parts.
/// Should not prevent table shutdown.
tryLogCurrentException(log);
}
}
StorageMergeTree::~StorageMergeTree()
{
shutdown();
}
Pipes StorageMergeTree::read(
const Names & column_names,
const StorageMetadataPtr & /*metadata_snapshot*/,
const SelectQueryInfo & query_info,
const Context & context,
QueryProcessingStage::Enum /*processed_stage*/,
const size_t max_block_size,
const unsigned num_streams)
{
return reader.read(column_names, query_info, context, max_block_size, num_streams);
}
std::optional<UInt64> StorageMergeTree::totalRows() const
{
return getTotalActiveSizeInRows();
}
std::optional<UInt64> StorageMergeTree::totalBytes() const
{
return getTotalActiveSizeInBytes();
}
BlockOutputStreamPtr StorageMergeTree::write(const ASTPtr & /*query*/, const StorageMetadataPtr & /*metadata_snapshot*/, const Context & context)
{
return std::make_shared<MergeTreeBlockOutputStream>(*this, context.getSettingsRef().max_partitions_per_insert_block);
}
void StorageMergeTree::checkTableCanBeDropped() const
{
auto table_id = getStorageID();
global_context.checkTableCanBeDropped(table_id.database_name, table_id.table_name, getTotalActiveSizeInBytes());
}
void StorageMergeTree::checkPartitionCanBeDropped(const ASTPtr & partition)
{
auto table_id = getStorageID();
const String partition_id = getPartitionIDFromQuery(partition, global_context);
auto parts_to_remove = getDataPartsVectorInPartition(MergeTreeDataPartState::Committed, partition_id);
UInt64 partition_size = 0;
for (const auto & part : parts_to_remove)
{
partition_size += part->getBytesOnDisk();
}
global_context.checkPartitionCanBeDropped(table_id.database_name, table_id.table_name, partition_size);
}
void StorageMergeTree::drop()
{
shutdown();
dropAllData();
}
void StorageMergeTree::truncate(const ASTPtr &, const Context &, TableStructureWriteLockHolder &)
{
{
/// Asks to complete merges and does not allow them to start.
/// This protects against "revival" of data for a removed partition after completion of merge.
auto merge_blocker = merger_mutator.merges_blocker.cancel();
/// NOTE: It's assumed that this method is called under lockForAlter.
auto parts_to_remove = getDataPartsVector();
removePartsFromWorkingSet(parts_to_remove, true);
LOG_INFO(log, "Removed {} parts.", parts_to_remove.size());
}
clearOldMutations(true);
clearOldPartsFromFilesystem();
}
void StorageMergeTree::alter(
const AlterCommands & commands,
const Context & context,
TableStructureWriteLockHolder & table_lock_holder)
{
auto table_id = getStorageID();
StorageInMemoryMetadata new_metadata = getInMemoryMetadata();
auto maybe_mutation_commands = commands.getMutationCommands(new_metadata, context.getSettingsRef().materialize_ttl_after_modify, context);
String mutation_file_name;
Int64 mutation_version = -1;
commands.apply(new_metadata, context);
/// This alter can be performed at new_metadata level only
if (commands.isSettingsAlter())
{
lockStructureExclusively(table_lock_holder, context.getCurrentQueryId(), context.getSettingsRef().lock_acquire_timeout);
changeSettings(new_metadata.settings_changes, table_lock_holder);
DatabaseCatalog::instance().getDatabase(table_id.database_name)->alterTable(context, table_id, new_metadata);
}
else
{
{
/// TODO (relax this lock and remove this action lock)
auto merges_block = getActionLock(ActionLocks::PartsMerge);
lockStructureExclusively(table_lock_holder, context.getCurrentQueryId(), context.getSettingsRef().lock_acquire_timeout);
changeSettings(new_metadata.settings_changes, table_lock_holder);
/// Reinitialize primary key because primary key column types might have changed.
setProperties(new_metadata);
setTTLExpressions(new_metadata);
DatabaseCatalog::instance().getDatabase(table_id.database_name)->alterTable(context, table_id, new_metadata);
if (!maybe_mutation_commands.empty())
mutation_version = startMutation(maybe_mutation_commands, mutation_file_name);
/// We release all locks except alter_intention_lock which allows
/// to execute alter queries sequentially
table_lock_holder.releaseAllExceptAlterIntention();
}
/// Always execute required mutations synchronously, because alters
/// should be executed in sequential order.
if (!maybe_mutation_commands.empty())
waitForMutation(mutation_version, mutation_file_name);
}
}
/// While exists, marks parts as 'currently_merging_mutating_parts' and reserves free space on filesystem.
struct CurrentlyMergingPartsTagger
{
FutureMergedMutatedPart future_part;
ReservationPtr reserved_space;
bool is_successful = false;
String exception_message;
StorageMergeTree & storage;
public:
CurrentlyMergingPartsTagger(FutureMergedMutatedPart & future_part_, size_t total_size, StorageMergeTree & storage_, bool is_mutation)
: future_part(future_part_), storage(storage_)
{
/// Assume mutex is already locked, because this method is called from mergeTask.
/// if we mutate part, than we should reserve space on the same disk, because mutations possible can create hardlinks
if (is_mutation)
reserved_space = storage.tryReserveSpace(total_size, future_part_.parts[0]->volume);
else
{
IMergeTreeDataPart::TTLInfos ttl_infos;
size_t max_volume_index = 0;
for (auto & part_ptr : future_part_.parts)
{
ttl_infos.update(part_ptr->ttl_infos);
max_volume_index = std::max(max_volume_index, storage.getStoragePolicy()->getVolumeIndexByDisk(part_ptr->volume->getDisk()));
}
reserved_space = storage.tryReserveSpacePreferringTTLRules(total_size, ttl_infos, time(nullptr), max_volume_index);
}
if (!reserved_space)
{
if (is_mutation)
throw Exception("Not enough space for mutating part '" + future_part_.parts[0]->name + "'", ErrorCodes::NOT_ENOUGH_SPACE);
else
throw Exception("Not enough space for merging parts", ErrorCodes::NOT_ENOUGH_SPACE);
}
future_part_.updatePath(storage, reserved_space);
for (const auto & part : future_part.parts)
{
if (storage.currently_merging_mutating_parts.count(part))
throw Exception("Tagging already tagged part " + part->name + ". This is a bug.", ErrorCodes::LOGICAL_ERROR);
}
storage.currently_merging_mutating_parts.insert(future_part.parts.begin(), future_part.parts.end());
}
~CurrentlyMergingPartsTagger()
{
std::lock_guard lock(storage.currently_processing_in_background_mutex);
for (const auto & part : future_part.parts)
{
if (!storage.currently_merging_mutating_parts.count(part))
std::terminate();
storage.currently_merging_mutating_parts.erase(part);
}
/// Update the information about failed parts in the system.mutations table.
Int64 sources_data_version = future_part.parts.at(0)->info.getDataVersion();
Int64 result_data_version = future_part.part_info.getDataVersion();
auto mutations_begin_it = storage.current_mutations_by_version.end();
auto mutations_end_it = storage.current_mutations_by_version.end();
if (sources_data_version != result_data_version)
{
mutations_begin_it = storage.current_mutations_by_version.upper_bound(sources_data_version);
mutations_end_it = storage.current_mutations_by_version.upper_bound(result_data_version);
}
for (auto it = mutations_begin_it; it != mutations_end_it; ++it)
{
MergeTreeMutationEntry & entry = it->second;
if (is_successful)
{
if (!entry.latest_failed_part.empty() && future_part.part_info.contains(entry.latest_failed_part_info))
{
entry.latest_failed_part.clear();
entry.latest_failed_part_info = MergeTreePartInfo();
entry.latest_fail_time = 0;
entry.latest_fail_reason.clear();
}
}
else
{
entry.latest_failed_part = future_part.parts.at(0)->name;
entry.latest_failed_part_info = future_part.parts.at(0)->info;
entry.latest_fail_time = time(nullptr);
entry.latest_fail_reason = exception_message;
}
}
storage.currently_processing_in_background_condition.notify_all();
}
};
Int64 StorageMergeTree::startMutation(const MutationCommands & commands, String & mutation_file_name)
{
/// Choose any disk, because when we load mutations we search them at each disk
/// where storage can be placed. See loadMutations().
auto disk = getStoragePolicy()->getAnyDisk();
Int64 version;
std::lock_guard lock(currently_processing_in_background_mutex);
MergeTreeMutationEntry entry(commands, disk, relative_data_path, insert_increment.get());
version = increment.get();
entry.commit(version);
mutation_file_name = entry.file_name;
auto insertion = current_mutations_by_id.emplace(mutation_file_name, std::move(entry));
current_mutations_by_version.emplace(version, insertion.first->second);
LOG_INFO(log, "Added mutation: {}", mutation_file_name);
merging_mutating_task_handle->signalReadyToRun();
return version;
}
void StorageMergeTree::waitForMutation(Int64 version, const String & file_name)
{
LOG_INFO(log, "Waiting mutation: {}", file_name);
auto check = [version, this]() { return shutdown_called || isMutationDone(version); };
std::unique_lock lock(mutation_wait_mutex);
mutation_wait_event.wait(lock, check);
LOG_INFO(log, "Mutation {} done", file_name);
}
void StorageMergeTree::mutate(const MutationCommands & commands, const Context & query_context)
{
String mutation_file_name;
Int64 version = startMutation(commands, mutation_file_name);
if (query_context.getSettingsRef().mutations_sync > 0)
waitForMutation(version, mutation_file_name);
}
namespace
{
struct PartVersionWithName
{
Int64 version;
String name;
};
bool comparator(const PartVersionWithName & f, const PartVersionWithName & s)
{
return f.version < s.version;
}
}
bool StorageMergeTree::isMutationDone(Int64 mutation_version) const
{
std::lock_guard lock(currently_processing_in_background_mutex);
/// Killed
if (!current_mutations_by_version.count(mutation_version))
return true;
auto data_parts = getDataPartsVector();
for (const auto & data_part : data_parts)
if (data_part->info.getDataVersion() < mutation_version)
return false;
return true;
}
std::vector<MergeTreeMutationStatus> StorageMergeTree::getMutationsStatus() const
{
std::lock_guard lock(currently_processing_in_background_mutex);
std::vector<PartVersionWithName> part_versions_with_names;
auto data_parts = getDataPartsVector();
part_versions_with_names.reserve(data_parts.size());
for (const auto & part : data_parts)
part_versions_with_names.emplace_back(PartVersionWithName{part->info.getDataVersion(), part->name});
std::sort(part_versions_with_names.begin(), part_versions_with_names.end(), comparator);
std::vector<MergeTreeMutationStatus> result;
for (const auto & kv : current_mutations_by_version)
{
Int64 mutation_version = kv.first;
const MergeTreeMutationEntry & entry = kv.second;
const PartVersionWithName needle{mutation_version, ""};
auto versions_it = std::lower_bound(
part_versions_with_names.begin(), part_versions_with_names.end(), needle, comparator);
size_t parts_to_do = versions_it - part_versions_with_names.begin();
Names parts_to_do_names;
parts_to_do_names.reserve(parts_to_do);
for (size_t i = 0; i < parts_to_do; ++i)
parts_to_do_names.push_back(part_versions_with_names[i].name);
std::map<String, Int64> block_numbers_map({{"", entry.block_number}});
for (const MutationCommand & command : entry.commands)
{
std::stringstream ss;
formatAST(*command.ast, ss, false, true);
result.push_back(MergeTreeMutationStatus
{
entry.file_name,
ss.str(),
entry.create_time,
block_numbers_map,
parts_to_do_names,
parts_to_do_names.empty(),
entry.latest_failed_part,
entry.latest_fail_time,
entry.latest_fail_reason,
});
}
}
return result;
}
CancellationCode StorageMergeTree::killMutation(const String & mutation_id)
{
LOG_TRACE(log, "Killing mutation {}", mutation_id);
std::optional<MergeTreeMutationEntry> to_kill;
{
std::lock_guard lock(currently_processing_in_background_mutex);
auto it = current_mutations_by_id.find(mutation_id);
if (it != current_mutations_by_id.end())
{
to_kill.emplace(std::move(it->second));
current_mutations_by_id.erase(it);
current_mutations_by_version.erase(to_kill->block_number);
}
}
if (!to_kill)
return CancellationCode::NotFound;
global_context.getMergeList().cancelPartMutations({}, to_kill->block_number);
to_kill->removeFile();
LOG_TRACE(log, "Cancelled part mutations and removed mutation file {}", mutation_id);
{
std::lock_guard<std::mutex> lock(mutation_wait_mutex);
mutation_wait_event.notify_all();
}
/// Maybe there is another mutation that was blocked by the killed one. Try to execute it immediately.
merging_mutating_task_handle->signalReadyToRun();
return CancellationCode::CancelSent;
}
void StorageMergeTree::loadMutations()
{
for (const auto & [path, disk] : getRelativeDataPathsWithDisks())
{
for (auto it = disk->iterateDirectory(path); it->isValid(); it->next())
{
if (startsWith(it->name(), "mutation_"))
{
MergeTreeMutationEntry entry(disk, path, it->name());
Int64 block_number = entry.block_number;
LOG_DEBUG(log, "Loading mutation: {} entry, commands size: {}", it->name(), entry.commands.size());
auto insertion = current_mutations_by_id.emplace(it->name(), std::move(entry));
current_mutations_by_version.emplace(block_number, insertion.first->second);
}
else if (startsWith(it->name(), "tmp_mutation_"))
{
disk->remove(it->path());
}
}
}
if (!current_mutations_by_version.empty())
increment.value = std::max(Int64(increment.value.load()), current_mutations_by_version.rbegin()->first);
}
bool StorageMergeTree::merge(
bool aggressive,
const String & partition_id,
bool final,
bool deduplicate,
String * out_disable_reason)
{
auto table_lock_holder = lockStructureForShare(
true, RWLockImpl::NO_QUERY, getSettings()->lock_acquire_timeout_for_background_operations);
auto metadata_snapshot = getInMemoryMetadataPtr();
FutureMergedMutatedPart future_part;
/// You must call destructor with unlocked `currently_processing_in_background_mutex`.
std::optional<CurrentlyMergingPartsTagger> merging_tagger;
{
std::unique_lock lock(currently_processing_in_background_mutex);
auto can_merge = [this, &lock] (const DataPartPtr & left, const DataPartPtr & right, String *) -> bool
{
/// This predicate is checked for the first part of each partition.
/// (left = nullptr, right = "first part of partition")
if (!left)
return !currently_merging_mutating_parts.count(right);
return !currently_merging_mutating_parts.count(left) && !currently_merging_mutating_parts.count(right)
&& getCurrentMutationVersion(left, lock) == getCurrentMutationVersion(right, lock);
};
bool selected = false;
if (partition_id.empty())
{
UInt64 max_source_parts_size = merger_mutator.getMaxSourcePartsSizeForMerge();
if (max_source_parts_size > 0)
selected = merger_mutator.selectPartsToMerge(future_part, aggressive, max_source_parts_size, can_merge, out_disable_reason);
else if (out_disable_reason)
*out_disable_reason = "Current value of max_source_parts_size is zero";
}
else
{
while (true)
{
UInt64 disk_space = getStoragePolicy()->getMaxUnreservedFreeSpace();
selected = merger_mutator.selectAllPartsToMergeWithinPartition(
future_part, disk_space, can_merge, partition_id, final, out_disable_reason);
/// If final - we will wait for currently processing merges to finish and continue.
/// TODO Respect query settings for timeout
if (final
&& !selected
&& !currently_merging_mutating_parts.empty()
&& out_disable_reason
&& out_disable_reason->empty())
{
LOG_DEBUG(log, "Waiting for currently running merges ({} parts are merging right now) to perform OPTIMIZE FINAL",
currently_merging_mutating_parts.size());
if (std::cv_status::timeout == currently_processing_in_background_condition.wait_for(
lock, std::chrono::seconds(DBMS_DEFAULT_LOCK_ACQUIRE_TIMEOUT_SEC)))
{
*out_disable_reason = "Timeout while waiting for already running merges before running OPTIMIZE with FINAL";
break;
}
}
else
break;
}
}
if (!selected)
{
if (out_disable_reason)
{
if (!out_disable_reason->empty())
{
*out_disable_reason += ". ";
}
*out_disable_reason += "Cannot select parts for optimization";
}
return false;
}
merging_tagger.emplace(future_part, MergeTreeDataMergerMutator::estimateNeededDiskSpace(future_part.parts), *this, false);
}
auto table_id = getStorageID();
MergeList::EntryPtr merge_entry = global_context.getMergeList().insert(table_id.database_name, table_id.table_name, future_part);
/// Logging
Stopwatch stopwatch;
MutableDataPartPtr new_part;
auto write_part_log = [&] (const ExecutionStatus & execution_status)
{
writePartLog(
PartLogElement::MERGE_PARTS,
execution_status,
stopwatch.elapsed(),
future_part.name,
new_part,
future_part.parts,
merge_entry.get());
};
try
{
/// Force filter by TTL in 'OPTIMIZE ... FINAL' query to remove expired values from old parts
/// without TTL infos or with outdated TTL infos, e.g. after 'ALTER ... MODIFY TTL' query.
bool force_ttl = (final && hasAnyTTL());
new_part = merger_mutator.mergePartsToTemporaryPart(
future_part, metadata_snapshot, *merge_entry, table_lock_holder, time(nullptr),
merging_tagger->reserved_space, deduplicate, force_ttl);
merger_mutator.renameMergedTemporaryPart(new_part, future_part.parts, nullptr);
merging_tagger->is_successful = true;
write_part_log({});
}
catch (...)
{
merging_tagger->exception_message = getCurrentExceptionMessage(false);
write_part_log(ExecutionStatus::fromCurrentException());
throw;
}
return true;
}
bool StorageMergeTree::partIsAssignedToBackgroundOperation(const DataPartPtr & part) const
{
std::lock_guard background_processing_lock(currently_processing_in_background_mutex);
return currently_merging_mutating_parts.count(part);
}
BackgroundProcessingPoolTaskResult StorageMergeTree::movePartsTask()
{
try
{
if (!selectPartsAndMove())
return BackgroundProcessingPoolTaskResult::NOTHING_TO_DO;
return BackgroundProcessingPoolTaskResult::SUCCESS;
}
catch (...)
{
tryLogCurrentException(log);
return BackgroundProcessingPoolTaskResult::ERROR;
}
}
bool StorageMergeTree::tryMutatePart()
{
auto table_lock_holder = lockStructureForShare(
true, RWLockImpl::NO_QUERY, getSettings()->lock_acquire_timeout_for_background_operations);
StorageMetadataPtr metadata_snapshot = getInMemoryMetadataPtr();
size_t max_ast_elements = global_context.getSettingsRef().max_expanded_ast_elements;
FutureMergedMutatedPart future_part;
MutationCommands commands;
/// You must call destructor with unlocked `currently_processing_in_background_mutex`.
std::optional<CurrentlyMergingPartsTagger> tagger;
{
std::lock_guard lock(currently_processing_in_background_mutex);
if (current_mutations_by_version.empty())
return false;
auto mutations_end_it = current_mutations_by_version.end();
for (const auto & part : getDataPartsVector())
{
if (currently_merging_mutating_parts.count(part))
continue;
auto mutations_begin_it = current_mutations_by_version.upper_bound(part->info.getDataVersion());
if (mutations_begin_it == mutations_end_it)
continue;
if (merger_mutator.getMaxSourcePartSizeForMutation() < part->getBytesOnDisk())
continue;
size_t current_ast_elements = 0;
for (auto it = mutations_begin_it; it != mutations_end_it; ++it)
{
size_t commands_size = 0;
MutationCommands commands_for_size_validation;
for (const auto & command : it->second.commands)
{
if (command.type != MutationCommand::Type::DROP_COLUMN
&& command.type != MutationCommand::Type::DROP_INDEX
&& command.type != MutationCommand::Type::RENAME_COLUMN)
{
commands_for_size_validation.push_back(command);
}
else
{
commands_size += command.ast->size();
}
}
if (!commands_for_size_validation.empty())
{
MutationsInterpreter interpreter(shared_from_this(), commands_for_size_validation, global_context, false);
commands_size += interpreter.evaluateCommandsSize();
}
if (current_ast_elements + commands_size >= max_ast_elements)
break;
current_ast_elements += commands_size;
commands.insert(commands.end(), it->second.commands.begin(), it->second.commands.end());
}
auto new_part_info = part->info;
new_part_info.mutation = current_mutations_by_version.rbegin()->first;
future_part.parts.push_back(part);
future_part.part_info = new_part_info;
future_part.name = part->getNewName(new_part_info);
future_part.type = part->getType();
tagger.emplace(future_part, MergeTreeDataMergerMutator::estimateNeededDiskSpace({part}), *this, true);
break;
}
}
if (!tagger)
return false;
auto table_id = getStorageID();
MergeList::EntryPtr merge_entry = global_context.getMergeList().insert(table_id.database_name, table_id.table_name, future_part);
Stopwatch stopwatch;
MutableDataPartPtr new_part;
auto write_part_log = [&] (const ExecutionStatus & execution_status)
{
writePartLog(
PartLogElement::MUTATE_PART,
execution_status,
stopwatch.elapsed(),
future_part.name,
new_part,
future_part.parts,
merge_entry.get());
};
try
{
new_part = merger_mutator.mutatePartToTemporaryPart(
future_part, metadata_snapshot, commands, *merge_entry,
time(nullptr), global_context, tagger->reserved_space, table_lock_holder);
renameTempPartAndReplace(new_part);
tagger->is_successful = true;
write_part_log({});
/// Notify all, who wait for this or previous mutations
{
std::lock_guard<std::mutex> lock(mutation_wait_mutex);
mutation_wait_event.notify_all();
}
}
catch (...)
{
tagger->exception_message = getCurrentExceptionMessage(false);
write_part_log(ExecutionStatus::fromCurrentException());
throw;
}
return true;
}
BackgroundProcessingPoolTaskResult StorageMergeTree::mergeMutateTask()
{
if (shutdown_called)
return BackgroundProcessingPoolTaskResult::ERROR;
if (merger_mutator.merges_blocker.isCancelled())
return BackgroundProcessingPoolTaskResult::NOTHING_TO_DO;
try
{
/// Clear old parts. It is unnecessary to do it more than once a second.
if (auto lock = time_after_previous_cleanup.compareAndRestartDeferred(1))
{
{
/// TODO: Implement tryLockStructureForShare.
auto lock_structure = lockStructureForShare(
false, RWLockImpl::NO_QUERY, getSettings()->lock_acquire_timeout_for_background_operations);
clearOldPartsFromFilesystem();
clearOldTemporaryDirectories();
}
clearOldMutations();
}
///TODO: read deduplicate option from table config
if (merge(false /*aggressive*/, {} /*partition_id*/, false /*final*/, false /*deduplicate*/))
return BackgroundProcessingPoolTaskResult::SUCCESS;
if (tryMutatePart())
return BackgroundProcessingPoolTaskResult::SUCCESS;
return BackgroundProcessingPoolTaskResult::ERROR;
}
catch (const Exception & e)
{
if (e.code() == ErrorCodes::ABORTED)
{
LOG_INFO(log, e.message());
return BackgroundProcessingPoolTaskResult::ERROR;
}
throw;
}
}
Int64 StorageMergeTree::getCurrentMutationVersion(
const DataPartPtr & part,
std::unique_lock<std::mutex> & /* currently_processing_in_background_mutex_lock */) const
{
auto it = current_mutations_by_version.upper_bound(part->info.getDataVersion());
if (it == current_mutations_by_version.begin())
return 0;
--it;
return it->first;
}
void StorageMergeTree::clearOldMutations(bool truncate)
{
const auto settings = getSettings();
if (!truncate && !settings->finished_mutations_to_keep)
return;
std::vector<MergeTreeMutationEntry> mutations_to_delete;
{
std::lock_guard lock(currently_processing_in_background_mutex);
if (!truncate && current_mutations_by_version.size() <= settings->finished_mutations_to_keep)
return;
auto end_it = current_mutations_by_version.end();
auto begin_it = current_mutations_by_version.begin();
size_t to_delete_count = std::distance(begin_it, end_it);
if (!truncate)
{
if (std::optional<Int64> min_version = getMinPartDataVersion())
end_it = current_mutations_by_version.upper_bound(*min_version);
size_t done_count = std::distance(begin_it, end_it);
if (done_count <= settings->finished_mutations_to_keep)
return;
to_delete_count = done_count - settings->finished_mutations_to_keep;
}
auto it = begin_it;
for (size_t i = 0; i < to_delete_count; ++i)
{
mutations_to_delete.push_back(std::move(it->second));
current_mutations_by_id.erase(mutations_to_delete.back().file_name);
it = current_mutations_by_version.erase(it);
}
}
for (auto & mutation : mutations_to_delete)
{
LOG_TRACE(log, "Removing mutation: {}", mutation.file_name);
mutation.removeFile();
}
}
bool StorageMergeTree::optimize(
const ASTPtr & /*query*/, const ASTPtr & partition, bool final, bool deduplicate, const Context & context)
{
String disable_reason;
if (!partition && final)
{
DataPartsVector data_parts = getDataPartsVector();
std::unordered_set<String> partition_ids;
for (const DataPartPtr & part : data_parts)
partition_ids.emplace(part->info.partition_id);
for (const String & partition_id : partition_ids)
{
if (!merge(true, partition_id, true, deduplicate, &disable_reason))
{
std::stringstream message;
message << "Cannot OPTIMIZE table";
if (!disable_reason.empty())
message << ": " << disable_reason;
else
message << " by some reason.";
LOG_INFO(log, message.str());
if (context.getSettingsRef().optimize_throw_if_noop)
throw Exception(message.str(), ErrorCodes::CANNOT_ASSIGN_OPTIMIZE);
return false;
}
}
}
else
{
String partition_id;
if (partition)
partition_id = getPartitionIDFromQuery(partition, context);
if (!merge(true, partition_id, final, deduplicate, &disable_reason))
{
std::stringstream message;
message << "Cannot OPTIMIZE table";
if (!disable_reason.empty())
message << ": " << disable_reason;
else
message << " by some reason.";
LOG_INFO(log, message.str());
if (context.getSettingsRef().optimize_throw_if_noop)
throw Exception(message.str(), ErrorCodes::CANNOT_ASSIGN_OPTIMIZE);
return false;
}
}
return true;
}
void StorageMergeTree::alterPartition(const ASTPtr & query, const PartitionCommands & commands, const Context & context)
{
for (const PartitionCommand & command : commands)
{
switch (command.type)
{
case PartitionCommand::DROP_PARTITION:
checkPartitionCanBeDropped(command.partition);
dropPartition(command.partition, command.detach, context);
break;
case PartitionCommand::DROP_DETACHED_PARTITION:
dropDetached(command.partition, command.part, context);
break;
case PartitionCommand::ATTACH_PARTITION:
attachPartition(command.partition, command.part, context);
break;
case PartitionCommand::MOVE_PARTITION:
{
switch (*command.move_destination_type)
{
case PartitionCommand::MoveDestinationType::DISK:
movePartitionToDisk(command.partition, command.move_destination_name, command.part, context);
break;
case PartitionCommand::MoveDestinationType::VOLUME:
movePartitionToVolume(command.partition, command.move_destination_name, command.part, context);
break;
case PartitionCommand::MoveDestinationType::TABLE:
checkPartitionCanBeDropped(command.partition);
String dest_database = context.resolveDatabase(command.to_database);
auto dest_storage = DatabaseCatalog::instance().getTable({dest_database, command.to_table}, context);
movePartitionToTable(dest_storage, command.partition, context);
break;
}
}
break;
case PartitionCommand::REPLACE_PARTITION:
{
checkPartitionCanBeDropped(command.partition);
String from_database = context.resolveDatabase(command.from_database);
auto from_storage = DatabaseCatalog::instance().getTable({from_database, command.from_table}, context);
replacePartitionFrom(from_storage, command.partition, command.replace, context);
}
break;
case PartitionCommand::FREEZE_PARTITION:
{
auto lock = lockStructureForShare(
false, context.getCurrentQueryId(), context.getSettingsRef().lock_acquire_timeout);
freezePartition(command.partition, command.with_name, context, lock);
}
break;
case PartitionCommand::FREEZE_ALL_PARTITIONS:
{
auto lock = lockStructureForShare(
false, context.getCurrentQueryId(), context.getSettingsRef().lock_acquire_timeout);
freezeAll(command.with_name, context, lock);
}
break;
default:
IStorage::alterPartition(query, commands, context); // should throw an exception.
}
}
}
void StorageMergeTree::dropPartition(const ASTPtr & partition, bool detach, const Context & context)
{
{
/// Asks to complete merges and does not allow them to start.
/// This protects against "revival" of data for a removed partition after completion of merge.
auto merge_blocker = merger_mutator.merges_blocker.cancel();
/// Waits for completion of merge and does not start new ones.
auto lock = lockExclusively(context.getCurrentQueryId(), context.getSettingsRef().lock_acquire_timeout);
String partition_id = getPartitionIDFromQuery(partition, context);
/// TODO: should we include PreComitted parts like in Replicated case?
auto parts_to_remove = getDataPartsVectorInPartition(MergeTreeDataPartState::Committed, partition_id);
// TODO should we throw an exception if parts_to_remove is empty?
removePartsFromWorkingSet(parts_to_remove, true);
if (detach)
{
/// If DETACH clone parts to detached/ directory
for (const auto & part : parts_to_remove)
{
LOG_INFO(log, "Detaching {}", part->relative_path);
part->makeCloneInDetached("");
}
}
if (detach)
LOG_INFO(log, "Detached {} parts inside partition ID {}.", parts_to_remove.size(), partition_id);
else
LOG_INFO(log, "Removed {} parts inside partition ID {}.", parts_to_remove.size(), partition_id);
}
clearOldPartsFromFilesystem();
}
void StorageMergeTree::attachPartition(const ASTPtr & partition, bool attach_part, const Context & context)
{
// TODO: should get some locks to prevent race with 'alter … modify column'
PartsTemporaryRename renamed_parts(*this, "detached/");
MutableDataPartsVector loaded_parts = tryLoadPartsToAttach(partition, attach_part, context, renamed_parts);
for (size_t i = 0; i < loaded_parts.size(); ++i)
{
LOG_INFO(log, "Attaching part {} from {}", loaded_parts[i]->name, renamed_parts.old_and_new_names[i].second);
renameTempPartAndAdd(loaded_parts[i], &increment);
renamed_parts.old_and_new_names[i].first.clear();
LOG_INFO(log, "Finished attaching part");
}
/// New parts with other data may appear in place of deleted parts.
context.dropCaches();
}
void StorageMergeTree::replacePartitionFrom(const StoragePtr & source_table, const ASTPtr & partition, bool replace, const Context & context)
{
auto lock1 = lockStructureForShare(false, context.getCurrentQueryId(), context.getSettingsRef().lock_acquire_timeout);
auto lock2 = source_table->lockStructureForShare(false, context.getCurrentQueryId(), context.getSettingsRef().lock_acquire_timeout);
Stopwatch watch;
MergeTreeData & src_data = checkStructureAndGetMergeTreeData(source_table);
String partition_id = getPartitionIDFromQuery(partition, context);
DataPartsVector src_parts = src_data.getDataPartsVectorInPartition(MergeTreeDataPartState::Committed, partition_id);
MutableDataPartsVector dst_parts;
static const String TMP_PREFIX = "tmp_replace_from_";
for (const DataPartPtr & src_part : src_parts)
{
if (!canReplacePartition(src_part))
throw Exception(
"Cannot replace partition '" + partition_id + "' because part '" + src_part->name + "' has inconsistent granularity with table",
ErrorCodes::BAD_ARGUMENTS);
/// This will generate unique name in scope of current server process.
Int64 temp_index = insert_increment.get();
MergeTreePartInfo dst_part_info(partition_id, temp_index, temp_index, src_part->info.level);
dst_parts.emplace_back(cloneAndLoadDataPartOnSameDisk(src_part, TMP_PREFIX, dst_part_info));
}
/// ATTACH empty part set
if (!replace && dst_parts.empty())
return;
MergeTreePartInfo drop_range;
if (replace)
{
drop_range.partition_id = partition_id;
drop_range.min_block = 0;
drop_range.max_block = increment.get(); // there will be a "hole" in block numbers
drop_range.level = std::numeric_limits<decltype(drop_range.level)>::max();
}
/// Atomically add new parts and remove old ones
try
{
{
/// Here we use the transaction just like RAII since rare errors in renameTempPartAndReplace() are possible
/// and we should be able to rollback already added (Precomitted) parts
Transaction transaction(*this);
auto data_parts_lock = lockParts();
/// Populate transaction
for (MutableDataPartPtr & part : dst_parts)
renameTempPartAndReplace(part, &increment, &transaction, data_parts_lock);
transaction.commit(&data_parts_lock);
/// If it is REPLACE (not ATTACH), remove all parts which max_block_number less then min_block_number of the first new block
if (replace)
removePartsInRangeFromWorkingSet(drop_range, true, false, data_parts_lock);
}
PartLog::addNewParts(global_context, dst_parts, watch.elapsed());
}
catch (...)
{
PartLog::addNewParts(global_context, dst_parts, watch.elapsed(), ExecutionStatus::fromCurrentException());
throw;
}
}
void StorageMergeTree::movePartitionToTable(const StoragePtr & dest_table, const ASTPtr & partition, const Context & context)
{
auto lock1 = lockStructureForShare(false, context.getCurrentQueryId(), context.getSettingsRef().lock_acquire_timeout);
auto lock2 = dest_table->lockStructureForShare(false, context.getCurrentQueryId(), context.getSettingsRef().lock_acquire_timeout);
auto dest_table_storage = std::dynamic_pointer_cast<StorageMergeTree>(dest_table);
if (!dest_table_storage)
throw Exception("Table " + getStorageID().getNameForLogs() + " supports movePartitionToTable only for MergeTree family of table engines."
" Got " + dest_table->getName(), ErrorCodes::NOT_IMPLEMENTED);
if (dest_table_storage->getStoragePolicy() != this->getStoragePolicy())
throw Exception("Destination table " + dest_table_storage->getStorageID().getNameForLogs() +
" should have the same storage policy of source table " + getStorageID().getNameForLogs() + ". " +
getStorageID().getNameForLogs() + ": " + this->getStoragePolicy()->getName() + ", " +
dest_table_storage->getStorageID().getNameForLogs() + ": " + dest_table_storage->getStoragePolicy()->getName(), ErrorCodes::LOGICAL_ERROR);
Stopwatch watch;
MergeTreeData & src_data = dest_table_storage->checkStructureAndGetMergeTreeData(*this);
String partition_id = getPartitionIDFromQuery(partition, context);
DataPartsVector src_parts = src_data.getDataPartsVectorInPartition(MergeTreeDataPartState::Committed, partition_id);
MutableDataPartsVector dst_parts;
static const String TMP_PREFIX = "tmp_move_from_";
for (const DataPartPtr & src_part : src_parts)
{
if (!dest_table_storage->canReplacePartition(src_part))
throw Exception(
"Cannot move partition '" + partition_id + "' because part '" + src_part->name + "' has inconsistent granularity with table",
ErrorCodes::LOGICAL_ERROR);
/// This will generate unique name in scope of current server process.
Int64 temp_index = insert_increment.get();
MergeTreePartInfo dst_part_info(partition_id, temp_index, temp_index, src_part->info.level);
dst_parts.emplace_back(dest_table_storage->cloneAndLoadDataPartOnSameDisk(src_part, TMP_PREFIX, dst_part_info));
}
/// empty part set
if (dst_parts.empty())
return;
/// Move new parts to the destination table. NOTE It doesn't look atomic.
try
{
{
Transaction transaction(*dest_table_storage);
auto src_data_parts_lock = lockParts();
auto dest_data_parts_lock = dest_table_storage->lockParts();
std::mutex mutex;
DataPartsLock lock(mutex);
for (MutableDataPartPtr & part : dst_parts)
dest_table_storage->renameTempPartAndReplace(part, &increment, &transaction, lock);
removePartsFromWorkingSet(src_parts, true, lock);
transaction.commit(&lock);
}
clearOldMutations(true);
clearOldPartsFromFilesystem();
PartLog::addNewParts(global_context, dst_parts, watch.elapsed());
}
catch (...)
{
PartLog::addNewParts(global_context, dst_parts, watch.elapsed(), ExecutionStatus::fromCurrentException());
throw;
}
}
ActionLock StorageMergeTree::getActionLock(StorageActionBlockType action_type)
{
if (action_type == ActionLocks::PartsMerge)
return merger_mutator.merges_blocker.cancel();
else if (action_type == ActionLocks::PartsTTLMerge)
return merger_mutator.ttl_merges_blocker.cancel();
else if (action_type == ActionLocks::PartsMove)
return parts_mover.moves_blocker.cancel();
return {};
}
CheckResults StorageMergeTree::checkData(const ASTPtr & query, const Context & context)
{
CheckResults results;
DataPartsVector data_parts;
if (const auto & check_query = query->as<ASTCheckQuery &>(); check_query.partition)
{
String partition_id = getPartitionIDFromQuery(check_query.partition, context);
data_parts = getDataPartsVectorInPartition(MergeTreeDataPartState::Committed, partition_id);
}
else
data_parts = getDataPartsVector();
for (auto & part : data_parts)
{
auto disk = part->volume->getDisk();
String part_path = part->getFullRelativePath();
/// If the checksums file is not present, calculate the checksums and write them to disk.
String checksums_path = part_path + "checksums.txt";
String tmp_checksums_path = part_path + "checksums.txt.tmp";
if (!disk->exists(checksums_path))
{
try
{
auto calculated_checksums = checkDataPart(part, false);
calculated_checksums.checkEqual(part->checksums, true);
auto out = disk->writeFile(tmp_checksums_path, 4096);
part->checksums.write(*out);
disk->moveFile(tmp_checksums_path, checksums_path);
results.emplace_back(part->name, true, "Checksums recounted and written to disk.");
}
catch (const Exception & ex)
{
if (disk->exists(tmp_checksums_path))
disk->remove(tmp_checksums_path);
results.emplace_back(part->name, false,
"Check of part finished with error: '" + ex.message() + "'");
}
}
else
{
try
{
checkDataPart(part, true);
results.emplace_back(part->name, true, "");
}
catch (const Exception & ex)
{
results.emplace_back(part->name, false, ex.message());
}
}
}
return results;
}
MutationCommands StorageMergeTree::getFirtsAlterMutationCommandsForPart(const DataPartPtr & part) const
{
std::lock_guard lock(currently_processing_in_background_mutex);
auto it = current_mutations_by_version.upper_bound(part->info.getDataVersion());
if (it == current_mutations_by_version.end())
return {};
return it->second.commands;
}
}