ClickHouse/src/Storages/MergeTree/MergeTreeReaderStream.cpp
2022-05-18 22:56:46 +02:00

284 lines
9.7 KiB
C++

#include <Storages/MergeTree/MergeTreeReaderStream.h>
#include <Compression/CachedCompressedReadBuffer.h>
#include <base/getThreadId.h>
#include <utility>
namespace DB
{
namespace ErrorCodes
{
extern const int ARGUMENT_OUT_OF_BOUND;
extern const int CANNOT_READ_ALL_DATA;
}
MergeTreeReaderStream::MergeTreeReaderStream(
DiskPtr disk_,
const String & path_prefix_, const String & data_file_extension_, size_t marks_count_,
const MarkRanges & all_mark_ranges_,
const MergeTreeReaderSettings & settings_,
MarkCache * mark_cache_,
UncompressedCache * uncompressed_cache_, size_t file_size_,
const MergeTreeIndexGranularityInfo * index_granularity_info_,
const ReadBufferFromFileBase::ProfileCallback & profile_callback_, clockid_t clock_type_,
bool is_low_cardinality_dictionary_)
: settings(settings_)
, profile_callback(profile_callback_)
, clock_type(clock_type_)
, all_mark_ranges(all_mark_ranges_)
, file_size(file_size_)
, uncompressed_cache(uncompressed_cache_)
, disk(std::move(disk_))
, path_prefix(path_prefix_)
, data_file_extension(data_file_extension_)
, is_low_cardinality_dictionary(is_low_cardinality_dictionary_)
, marks_count(marks_count_)
, mark_cache(mark_cache_)
, save_marks_in_cache(settings.save_marks_in_cache)
, index_granularity_info(index_granularity_info_)
, marks_loader(disk, mark_cache, index_granularity_info->getMarksFilePath(path_prefix),
marks_count, *index_granularity_info, save_marks_in_cache) {}
void MergeTreeReaderStream::init()
{
if (initialized)
return;
initialized = true;
/// Compute the size of the buffer.
size_t max_mark_range_bytes = 0;
size_t sum_mark_range_bytes = 0;
for (const auto & mark_range : all_mark_ranges)
{
size_t left_mark = mark_range.begin;
size_t right_mark = mark_range.end;
size_t left_offset = left_mark < marks_count ? marks_loader.getMark(left_mark).offset_in_compressed_file : 0;
auto mark_range_bytes = getRightOffset(right_mark) - left_offset;
max_mark_range_bytes = std::max(max_mark_range_bytes, mark_range_bytes);
sum_mark_range_bytes += mark_range_bytes;
}
std::optional<size_t> estimated_sum_mark_range_bytes;
if (sum_mark_range_bytes)
estimated_sum_mark_range_bytes.emplace(sum_mark_range_bytes);
/// Avoid empty buffer. May happen while reading dictionary for DataTypeLowCardinality.
/// For example: part has single dictionary and all marks point to the same position.
ReadSettings read_settings = settings.read_settings;
if (max_mark_range_bytes != 0)
read_settings = read_settings.adjustBufferSize(max_mark_range_bytes);
//// Empty buffer does not makes progress.
if (!read_settings.local_fs_buffer_size || !read_settings.remote_fs_buffer_size)
throw Exception(ErrorCodes::CANNOT_READ_ALL_DATA, "Cannot read to empty buffer.");
/// Initialize the objects that shall be used to perform read operations.
if (uncompressed_cache)
{
auto buffer = std::make_unique<CachedCompressedReadBuffer>(
fullPath(disk, path_prefix + data_file_extension),
[this, estimated_sum_mark_range_bytes, read_settings]()
{
return disk->readFile(
path_prefix + data_file_extension,
read_settings,
estimated_sum_mark_range_bytes);
},
uncompressed_cache);
if (profile_callback)
buffer->setProfileCallback(profile_callback, clock_type);
if (!settings.checksum_on_read)
buffer->disableChecksumming();
cached_buffer = std::move(buffer);
data_buffer = cached_buffer.get();
compressed_data_buffer = cached_buffer.get();
}
else
{
auto buffer = std::make_unique<CompressedReadBufferFromFile>(
disk->readFile(
path_prefix + data_file_extension,
read_settings,
estimated_sum_mark_range_bytes));
if (profile_callback)
buffer->setProfileCallback(profile_callback, clock_type);
if (!settings.checksum_on_read)
buffer->disableChecksumming();
non_cached_buffer = std::move(buffer);
data_buffer = non_cached_buffer.get();
compressed_data_buffer = non_cached_buffer.get();
}
}
size_t MergeTreeReaderStream::getRightOffset(size_t right_mark_non_included)
{
/// NOTE: if we are reading the whole file, then right_mark == marks_count
/// and we will use max_read_buffer_size for buffer size, thus avoiding the need to load marks.
/// Special case, can happen in Collapsing/Replacing engines
if (marks_count == 0)
return 0;
assert(right_mark_non_included <= marks_count);
size_t result_right_offset;
if (0 < right_mark_non_included && right_mark_non_included < marks_count)
{
auto right_mark = marks_loader.getMark(right_mark_non_included);
result_right_offset = right_mark.offset_in_compressed_file;
bool need_to_check_marks_from_the_right = false;
/// If the end of range is inside the block, we will need to read it too.
if (right_mark.offset_in_decompressed_block > 0)
{
need_to_check_marks_from_the_right = true;
}
else if (is_low_cardinality_dictionary)
{
/// Also, in LowCardinality dictionary several consecutive marks can point to
/// the same offset. So to get true bytes offset we have to get first
/// non-equal mark.
/// Example:
/// Mark 186, points to [2003111, 0]
/// Mark 187, points to [2003111, 0]
/// Mark 188, points to [2003111, 0] <--- for example need to read until 188
/// Mark 189, points to [2003111, 0] <--- not suitable, because have same offset
/// Mark 190, points to [2003111, 0]
/// Mark 191, points to [2003111, 0]
/// Mark 192, points to [2081424, 0] <--- what we are looking for
/// Mark 193, points to [2081424, 0]
/// Mark 194, points to [2081424, 0]
/// Also, in some cases, when one granule is not-atomically written (which is possible at merges)
/// one granule may require reading of two dictionaries which starts from different marks.
/// The only correct way is to take offset from at least next different granule from the right one.
/// Check test_s3_low_cardinality_right_border.
need_to_check_marks_from_the_right = true;
}
/// Let's go to the right and find mark with bigger offset in compressed file
if (need_to_check_marks_from_the_right)
{
bool found_bigger_mark = false;
for (size_t i = right_mark_non_included + 1; i < marks_count; ++i)
{
const auto & candidate_mark = marks_loader.getMark(i);
if (result_right_offset < candidate_mark.offset_in_compressed_file)
{
result_right_offset = candidate_mark.offset_in_compressed_file;
found_bigger_mark = true;
break;
}
}
if (!found_bigger_mark)
{
/// If there are no marks after the end of range, just use file size
result_right_offset = file_size;
}
}
}
else if (right_mark_non_included == 0)
result_right_offset = marks_loader.getMark(right_mark_non_included).offset_in_compressed_file;
else
result_right_offset = file_size;
return result_right_offset;
}
void MergeTreeReaderStream::seekToMark(size_t index)
{
init();
MarkInCompressedFile mark = marks_loader.getMark(index);
try
{
compressed_data_buffer->seek(mark.offset_in_compressed_file, mark.offset_in_decompressed_block);
}
catch (Exception & e)
{
/// Better diagnostics.
if (e.code() == ErrorCodes::ARGUMENT_OUT_OF_BOUND)
e.addMessage("(while seeking to mark " + toString(index)
+ " of column " + path_prefix + "; offsets are: "
+ toString(mark.offset_in_compressed_file) + " "
+ toString(mark.offset_in_decompressed_block) + ")");
throw;
}
}
void MergeTreeReaderStream::seekToStart()
{
init();
try
{
compressed_data_buffer->seek(0, 0);
}
catch (Exception & e)
{
/// Better diagnostics.
if (e.code() == ErrorCodes::ARGUMENT_OUT_OF_BOUND)
e.addMessage("(while seeking to start of column " + path_prefix + ")");
throw;
}
}
void MergeTreeReaderStream::adjustRightMark(size_t right_mark)
{
/**
* Note: this method is called multiple times for the same range of marks -- each time we
* read from stream, but we must update last_right_offset only if it is bigger than
* the last one to avoid redundantly cancelling prefetches.
*/
init();
auto right_offset = getRightOffset(right_mark);
if (!right_offset)
{
if (last_right_offset && *last_right_offset == 0)
return;
last_right_offset = 0; // Zero value means the end of file.
data_buffer->setReadUntilEnd();
}
else
{
if (last_right_offset && right_offset <= last_right_offset.value())
return;
last_right_offset = right_offset;
data_buffer->setReadUntilPosition(right_offset);
}
}
ReadBuffer * MergeTreeReaderStream::getDataBuffer()
{
init();
return data_buffer;
}
CompressedReadBufferBase * MergeTreeReaderStream::getCompressedDataBuffer()
{
init();
return compressed_data_buffer;
}
}