ClickHouse/tests/integration/test_storage_s3/test.py
2022-02-16 12:45:31 +03:00

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import gzip
import json
import logging
import os
import io
import random
import threading
import time
import helpers.client
import pytest
from helpers.cluster import ClickHouseCluster, ClickHouseInstance, get_instances_dir
from helpers.network import PartitionManager
from helpers.test_tools import exec_query_with_retry
MINIO_INTERNAL_PORT = 9001
SCRIPT_DIR = os.path.dirname(os.path.realpath(__file__))
CONFIG_PATH = os.path.join(SCRIPT_DIR, './{}/dummy/configs/config.d/defaultS3.xml'.format(get_instances_dir()))
# Creates S3 bucket for tests and allows anonymous read-write access to it.
def prepare_s3_bucket(started_cluster):
# Allows read-write access for bucket without authorization.
bucket_read_write_policy = {"Version": "2012-10-17",
"Statement": [
{
"Sid": "",
"Effect": "Allow",
"Principal": {"AWS": "*"},
"Action": "s3:GetBucketLocation",
"Resource": "arn:aws:s3:::root"
},
{
"Sid": "",
"Effect": "Allow",
"Principal": {"AWS": "*"},
"Action": "s3:ListBucket",
"Resource": "arn:aws:s3:::root"
},
{
"Sid": "",
"Effect": "Allow",
"Principal": {"AWS": "*"},
"Action": "s3:GetObject",
"Resource": "arn:aws:s3:::root/*"
},
{
"Sid": "",
"Effect": "Allow",
"Principal": {"AWS": "*"},
"Action": "s3:PutObject",
"Resource": "arn:aws:s3:::root/*"
}
]}
minio_client = started_cluster.minio_client
minio_client.set_bucket_policy(started_cluster.minio_bucket, json.dumps(bucket_read_write_policy))
started_cluster.minio_restricted_bucket = "{}-with-auth".format(started_cluster.minio_bucket)
if minio_client.bucket_exists(started_cluster.minio_restricted_bucket):
minio_client.remove_bucket(started_cluster.minio_restricted_bucket)
minio_client.make_bucket(started_cluster.minio_restricted_bucket)
def put_s3_file_content(started_cluster, bucket, filename, data):
buf = io.BytesIO(data)
started_cluster.minio_client.put_object(bucket, filename, buf, len(data))
# Returns content of given S3 file as string.
def get_s3_file_content(started_cluster, bucket, filename, decode=True):
# type: (ClickHouseCluster, str, str, bool) -> str
data = started_cluster.minio_client.get_object(bucket, filename)
data_str = b""
for chunk in data.stream():
data_str += chunk
if decode:
return data_str.decode()
return data_str
@pytest.fixture(scope="module")
def started_cluster():
try:
cluster = ClickHouseCluster(__file__)
cluster.add_instance("restricted_dummy", main_configs=["configs/config_for_test_remote_host_filter.xml"],
with_minio=True)
cluster.add_instance("dummy", with_minio=True, main_configs=["configs/defaultS3.xml", "configs/named_collections.xml"])
cluster.add_instance("s3_max_redirects", with_minio=True, main_configs=["configs/defaultS3.xml"],
user_configs=["configs/s3_max_redirects.xml"])
logging.info("Starting cluster...")
cluster.start()
logging.info("Cluster started")
prepare_s3_bucket(cluster)
logging.info("S3 bucket created")
run_s3_mocks(cluster)
yield cluster
finally:
cluster.shutdown()
def run_query(instance, query, stdin=None, settings=None):
# type: (ClickHouseInstance, str, object, dict) -> str
logging.info("Running query '{}'...".format(query))
result = instance.query(query, stdin=stdin, settings=settings)
logging.info("Query finished")
return result
# Test simple put. Also checks that wrong credentials produce an error with every compression method.
@pytest.mark.parametrize("maybe_auth,positive,compression", [
pytest.param("", True, 'auto', id="positive"),
pytest.param("'minio','minio123',", True, 'auto', id="auth_positive"),
pytest.param("'wrongid','wrongkey',", False, 'auto', id="auto"),
pytest.param("'wrongid','wrongkey',", False, 'gzip', id="gzip"),
pytest.param("'wrongid','wrongkey',", False, 'deflate', id="deflate"),
pytest.param("'wrongid','wrongkey',", False, 'brotli', id="brotli"),
pytest.param("'wrongid','wrongkey',", False, 'xz', id="xz"),
pytest.param("'wrongid','wrongkey',", False, 'zstd', id="zstd")
])
def test_put(started_cluster, maybe_auth, positive, compression):
# type: (ClickHouseCluster) -> None
bucket = started_cluster.minio_bucket if not maybe_auth else started_cluster.minio_restricted_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
values = "(1, 2, 3), (3, 2, 1), (78, 43, 45)"
values_csv = "1,2,3\n3,2,1\n78,43,45\n"
filename = "test.csv"
put_query = f"""insert into table function s3('http://{started_cluster.minio_ip}:{started_cluster.minio_port}/{bucket}/{filename}',
{maybe_auth}'CSV', '{table_format}', {compression}) values settings s3_truncate_on_insert=1 {values}"""
try:
run_query(instance, put_query)
except helpers.client.QueryRuntimeException:
if positive:
raise
else:
assert positive
assert values_csv == get_s3_file_content(started_cluster, bucket, filename)
def test_partition_by(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
partition_by = "column3"
values = "(1, 2, 3), (3, 2, 1), (78, 43, 45)"
filename = "test_{_partition_id}.csv"
put_query = f"""INSERT INTO TABLE FUNCTION
s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/{filename}', 'CSV', '{table_format}')
PARTITION BY {partition_by} VALUES {values}"""
run_query(instance, put_query)
assert "1,2,3\n" == get_s3_file_content(started_cluster, bucket, "test_3.csv")
assert "3,2,1\n" == get_s3_file_content(started_cluster, bucket, "test_1.csv")
assert "78,43,45\n" == get_s3_file_content(started_cluster, bucket, "test_45.csv")
filename = "test2_{_partition_id}.csv"
instance.query(f"create table p ({table_format}) engine=S3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/{filename}', 'CSV') partition by column3")
instance.query(f"insert into p values {values}")
assert "1,2,3\n" == get_s3_file_content(started_cluster, bucket, "test2_3.csv")
assert "3,2,1\n" == get_s3_file_content(started_cluster, bucket, "test2_1.csv")
assert "78,43,45\n" == get_s3_file_content(started_cluster, bucket, "test2_45.csv")
def test_partition_by_string_column(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "col_num UInt32, col_str String"
partition_by = "col_str"
values = "(1, 'foo/bar'), (3, 'йцук'), (78, '你好')"
filename = "test_{_partition_id}.csv"
put_query = f"""INSERT INTO TABLE FUNCTION
s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/{filename}', 'CSV', '{table_format}')
PARTITION BY {partition_by} VALUES {values}"""
run_query(instance, put_query)
assert '1,"foo/bar"\n' == get_s3_file_content(started_cluster, bucket, "test_foo/bar.csv")
assert '3,"йцук"\n' == get_s3_file_content(started_cluster, bucket, "test_йцук.csv")
assert '78,"你好"\n' == get_s3_file_content(started_cluster, bucket, "test_你好.csv")
def test_partition_by_const_column(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
values = "(1, 2, 3), (3, 2, 1), (78, 43, 45)"
partition_by = "'88'"
values_csv = "1,2,3\n3,2,1\n78,43,45\n"
filename = "test_{_partition_id}.csv"
put_query = f"""INSERT INTO TABLE FUNCTION
s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/{filename}', 'CSV', '{table_format}')
PARTITION BY {partition_by} VALUES {values}"""
run_query(instance, put_query)
assert values_csv == get_s3_file_content(started_cluster, bucket, "test_88.csv")
@pytest.mark.parametrize("special", [
"space",
"plus"
])
def test_get_file_with_special(started_cluster, special):
symbol = {"space": " ", "plus": "+"}[special]
urlsafe_symbol = {"space": "%20", "plus": "%2B"}[special]
auth = "'minio','minio123',"
bucket = started_cluster.minio_restricted_bucket
instance = started_cluster.instances["dummy"]
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
values = [[12549, 2463, 19893], [64021, 38652, 66703], [81611, 39650, 83516], [11079, 59507, 61546], [51764, 69952, 6876], [41165, 90293, 29095], [40167, 78432, 48309], [81629, 81327, 11855], [55852, 21643, 98507], [6738, 54643, 41155]]
values_csv = ('\n'.join((','.join(map(str, row)) for row in values)) + '\n').encode()
filename = f"get_file_with_{special}_{symbol}two.csv"
put_s3_file_content(started_cluster, bucket, filename, values_csv)
get_query = f"SELECT * FROM s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/get_file_with_{special}_{urlsafe_symbol}two.csv', {auth}'CSV', '{table_format}') FORMAT TSV"
assert [list(map(int, l.split())) for l in run_query(instance, get_query).splitlines()] == values
get_query = f"SELECT * FROM s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/get_file_with_{special}*.csv', {auth}'CSV', '{table_format}') FORMAT TSV"
assert [list(map(int, l.split())) for l in run_query(instance, get_query).splitlines()] == values
get_query = f"SELECT * FROM s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/get_file_with_{special}_{urlsafe_symbol}*.csv', {auth}'CSV', '{table_format}') FORMAT TSV"
assert [list(map(int, l.split())) for l in run_query(instance, get_query).splitlines()] == values
@pytest.mark.parametrize("special", [
"space",
"plus",
"plus2"
])
def test_get_path_with_special(started_cluster, special):
symbol = {"space": "%20", "plus": "%2B", "plus2": "%2B"}[special]
safe_symbol = {"space": "%20", "plus": "+", "plus2": "%2B"}[special]
auth = "'minio','minio123',"
table_format = "column1 String"
instance = started_cluster.instances["dummy"]
get_query = f"SELECT * FROM s3('http://resolver:8082/get-my-path/{safe_symbol}.csv', {auth}'CSV', '{table_format}') FORMAT TSV"
assert run_query(instance, get_query).splitlines() == [f"/{symbol}.csv"]
# Test put no data to S3.
@pytest.mark.parametrize("auth", [
pytest.param("'minio','minio123',", id="minio")
])
def test_empty_put(started_cluster, auth):
# type: (ClickHouseCluster, str) -> None
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
drop_empty_table_query = "DROP TABLE IF EXISTS empty_table"
create_empty_table_query = """
CREATE TABLE empty_table (
{}
) ENGINE = Null()
""".format(table_format)
run_query(instance, drop_empty_table_query)
run_query(instance, create_empty_table_query)
filename = "empty_put_test.csv"
put_query = "insert into table function s3('http://{}:{}/{}/{}', {}'CSV', '{}') select * from empty_table".format(
started_cluster.minio_ip, MINIO_INTERNAL_PORT, bucket, filename, auth, table_format)
run_query(instance, put_query)
try:
run_query(instance, "select count(*) from s3('http://{}:{}/{}/{}', {}'CSV', '{}')".format(
started_cluster.minio_ip, MINIO_INTERNAL_PORT, bucket, filename, auth, table_format))
assert False, "Query should be failed."
except helpers.client.QueryRuntimeException as e:
assert str(e).find("The specified key does not exist") != 0
# Test put values in CSV format.
@pytest.mark.parametrize("maybe_auth,positive", [
pytest.param("", True, id="positive"),
pytest.param("'minio','minio123',", True, id="auth_positive"),
pytest.param("'wrongid','wrongkey',", False, id="negative"),
])
def test_put_csv(started_cluster, maybe_auth, positive):
# type: (ClickHouseCluster, bool, str) -> None
bucket = started_cluster.minio_bucket if not maybe_auth else started_cluster.minio_restricted_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
filename = "test.csv"
put_query = "insert into table function s3('http://{}:{}/{}/{}', {}'CSV', '{}') format CSV settings s3_truncate_on_insert=1".format(
started_cluster.minio_ip, MINIO_INTERNAL_PORT, bucket, filename, maybe_auth, table_format)
csv_data = "8,9,16\n11,18,13\n22,14,2\n"
try:
run_query(instance, put_query, stdin=csv_data)
except helpers.client.QueryRuntimeException:
if positive:
raise
else:
assert positive
assert csv_data == get_s3_file_content(started_cluster, bucket, filename)
# Test put and get with S3 server redirect.
def test_put_get_with_redirect(started_cluster):
# type: (ClickHouseCluster) -> None
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
values = "(1, 1, 1), (1, 1, 1), (11, 11, 11)"
values_csv = "1,1,1\n1,1,1\n11,11,11\n"
filename = "test.csv"
query = "insert into table function s3('http://{}:{}/{}/{}', 'CSV', '{}') values settings s3_truncate_on_insert=1 {}".format(
started_cluster.minio_redirect_host, started_cluster.minio_redirect_port, bucket, filename, table_format, values)
run_query(instance, query)
assert values_csv == get_s3_file_content(started_cluster, bucket, filename)
query = "select *, column1*column2*column3 from s3('http://{}:{}/{}/{}', 'CSV', '{}')".format(
started_cluster.minio_redirect_host, started_cluster.minio_redirect_port, bucket, filename, table_format)
stdout = run_query(instance, query)
assert list(map(str.split, stdout.splitlines())) == [
["1", "1", "1", "1"],
["1", "1", "1", "1"],
["11", "11", "11", "1331"],
]
# Test put with restricted S3 server redirect.
def test_put_with_zero_redirect(started_cluster):
# type: (ClickHouseCluster) -> None
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["s3_max_redirects"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
values = "(1, 1, 1), (1, 1, 1), (11, 11, 11)"
filename = "test.csv"
# Should work without redirect
query = "insert into table function s3('http://{}:{}/{}/{}', 'CSV', '{}') values settings s3_truncate_on_insert=1 {}".format(
started_cluster.minio_ip, MINIO_INTERNAL_PORT, bucket, filename, table_format, values)
run_query(instance, query)
# Should not work with redirect
query = "insert into table function s3('http://{}:{}/{}/{}', 'CSV', '{}') values settings s3_truncate_on_insert=1 {}".format(
started_cluster.minio_redirect_host, started_cluster.minio_redirect_port, bucket, filename, table_format, values)
exception_raised = False
try:
run_query(instance, query)
except Exception as e:
assert str(e).find("Too many redirects while trying to access") != -1
exception_raised = True
finally:
assert exception_raised
def test_put_get_with_globs(started_cluster):
# type: (ClickHouseCluster) -> None
unique_prefix = random.randint(1,10000)
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
max_path = ""
for i in range(10):
for j in range(10):
path = "{}/{}_{}/{}.csv".format(unique_prefix, i, random.choice(['a', 'b', 'c', 'd']), j)
max_path = max(path, max_path)
values = "({},{},{})".format(i, j, i + j)
query = "insert into table function s3('http://{}:{}/{}/{}', 'CSV', '{}') values {}".format(
started_cluster.minio_ip, MINIO_INTERNAL_PORT, bucket, path, table_format, values)
run_query(instance, query)
query = "select sum(column1), sum(column2), sum(column3), min(_file), max(_path) from s3('http://{}:{}/{}/{}/*_{{a,b,c,d}}/%3f.csv', 'CSV', '{}')".format(
started_cluster.minio_redirect_host, started_cluster.minio_redirect_port, bucket, unique_prefix, table_format)
assert run_query(instance, query).splitlines() == [
"450\t450\t900\t0.csv\t{bucket}/{max_path}".format(bucket=bucket, max_path=max_path)]
minio = started_cluster.minio_client
for obj in list(minio.list_objects(started_cluster.minio_bucket, prefix='{}/'.format(unique_prefix), recursive=True)):
minio.remove_object(started_cluster.minio_bucket, obj.object_name)
# Test multipart put.
@pytest.mark.parametrize("maybe_auth,positive", [
pytest.param("", True, id="positive"),
pytest.param("'wrongid','wrongkey'", False, id="negative"),
# ("'minio','minio123',",True), Redirect with credentials not working with nginx.
])
def test_multipart_put(started_cluster, maybe_auth, positive):
# type: (ClickHouseCluster) -> None
bucket = started_cluster.minio_bucket if not maybe_auth else started_cluster.minio_restricted_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
# Minimum size of part is 5 Mb for Minio.
# See: https://github.com/minio/minio/blob/master/docs/minio-limits.md
min_part_size_bytes = 5 * 1024 * 1024
csv_size_bytes = int(min_part_size_bytes * 1.5) # To have 2 parts.
one_line_length = 6 # 3 digits, 2 commas, 1 line separator.
# Generate data having size more than one part
int_data = [[1, 2, 3] for i in range(csv_size_bytes // one_line_length)]
csv_data = "".join(["{},{},{}\n".format(x, y, z) for x, y, z in int_data])
assert len(csv_data) > min_part_size_bytes
filename = "test_multipart.csv"
put_query = "insert into table function s3('http://{}:{}/{}/{}', {}'CSV', '{}') format CSV".format(
started_cluster.minio_redirect_host, started_cluster.minio_redirect_port, bucket, filename, maybe_auth, table_format)
try:
run_query(instance, put_query, stdin=csv_data, settings={'s3_min_upload_part_size': min_part_size_bytes,
's3_max_single_part_upload_size': 0})
except helpers.client.QueryRuntimeException:
if positive:
raise
else:
assert positive
# Use proxy access logs to count number of parts uploaded to Minio.
proxy_logs = started_cluster.get_container_logs("proxy1") # type: str
assert proxy_logs.count("PUT /{}/{}".format(bucket, filename)) >= 2
assert csv_data == get_s3_file_content(started_cluster, bucket, filename)
def test_remote_host_filter(started_cluster):
instance = started_cluster.instances["restricted_dummy"]
format = "column1 UInt32, column2 UInt32, column3 UInt32"
query = "select *, column1*column2*column3 from s3('http://{}:{}/{}/test.csv', 'CSV', '{}')".format(
"invalid_host", MINIO_INTERNAL_PORT, started_cluster.minio_bucket, format)
assert "not allowed in configuration file" in instance.query_and_get_error(query)
other_values = "(1, 1, 1), (1, 1, 1), (11, 11, 11)"
query = "insert into table function s3('http://{}:{}/{}/test.csv', 'CSV', '{}') values {}".format(
"invalid_host", MINIO_INTERNAL_PORT, started_cluster.minio_bucket, format, other_values)
assert "not allowed in configuration file" in instance.query_and_get_error(query)
def test_wrong_s3_syntax(started_cluster):
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
expected_err_msg = "Code: 42" # NUMBER_OF_ARGUMENTS_DOESNT_MATCH
query = "create table test_table_s3_syntax (id UInt32) ENGINE = S3('', '', '', '', '', '')"
assert expected_err_msg in instance.query_and_get_error(query)
expected_err_msg = "Code: 36" # BAD_ARGUMENTS
query = "create table test_table_s3_syntax (id UInt32) ENGINE = S3('')"
assert expected_err_msg in instance.query_and_get_error(query)
# https://en.wikipedia.org/wiki/One_Thousand_and_One_Nights
def test_s3_glob_scheherazade(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
max_path = ""
values = "(1, 1, 1)"
nights_per_job = 1001 // 30
jobs = []
for night in range(0, 1001, nights_per_job):
def add_tales(start, end):
for i in range(start, end):
path = "night_{}/tale.csv".format(i)
query = "insert into table function s3('http://{}:{}/{}/{}', 'CSV', '{}') values {}".format(
started_cluster.minio_ip, MINIO_INTERNAL_PORT, bucket, path, table_format, values)
run_query(instance, query)
jobs.append(threading.Thread(target=add_tales, args=(night, min(night + nights_per_job, 1001))))
jobs[-1].start()
for job in jobs:
job.join()
query = "select count(), sum(column1), sum(column2), sum(column3) from s3('http://{}:{}/{}/night_*/tale.csv', 'CSV', '{}')".format(
started_cluster.minio_redirect_host, started_cluster.minio_redirect_port, bucket, table_format)
assert run_query(instance, query).splitlines() == ["1001\t1001\t1001\t1001"]
def run_s3_mocks(started_cluster):
logging.info("Starting s3 mocks")
mocks = (
("mock_s3.py", "resolver", "8080"),
("unstable_server.py", "resolver", "8081"),
("echo.py", "resolver", "8082"),
)
for mock_filename, container, port in mocks:
container_id = started_cluster.get_container_id(container)
current_dir = os.path.dirname(__file__)
started_cluster.copy_file_to_container(container_id, os.path.join(current_dir, "s3_mocks", mock_filename), mock_filename)
started_cluster.exec_in_container(container_id, ["python", mock_filename, port], detach=True)
# Wait for S3 mocks to start
for mock_filename, container, port in mocks:
num_attempts = 100
for attempt in range(num_attempts):
ping_response = started_cluster.exec_in_container(started_cluster.get_container_id(container),
["curl", "-s", f"http://localhost:{port}/"], nothrow=True)
if ping_response != 'OK':
if attempt == num_attempts - 1:
assert ping_response == 'OK', 'Expected "OK", but got "{}"'.format(ping_response)
else:
time.sleep(1)
else:
logging.debug(f"mock {mock_filename} ({port}) answered {ping_response} on attempt {attempt}")
break
logging.info("S3 mocks started")
def replace_config(old, new):
config = open(CONFIG_PATH, 'r')
config_lines = config.readlines()
config.close()
config_lines = [line.replace(old, new) for line in config_lines]
config = open(CONFIG_PATH, 'w')
config.writelines(config_lines)
config.close()
def test_custom_auth_headers(started_cluster):
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
filename = "test.csv"
get_query = "select * from s3('http://resolver:8080/{bucket}/{file}', 'CSV', '{table_format}')".format(
bucket=started_cluster.minio_restricted_bucket,
file=filename,
table_format=table_format)
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
result = run_query(instance, get_query)
assert result == '1\t2\t3\n'
instance.query("DROP TABLE IF EXISTS test")
instance.query(
"CREATE TABLE test ({table_format}) ENGINE = S3('http://resolver:8080/{bucket}/{file}', 'CSV')".format(
bucket=started_cluster.minio_restricted_bucket,
file=filename,
table_format=table_format
))
assert run_query(instance, "SELECT * FROM test") == '1\t2\t3\n'
replace_config("<header>Authorization: Bearer TOKEN", "<header>Authorization: Bearer INVALID_TOKEN")
instance.query("SYSTEM RELOAD CONFIG")
ret, err = instance.query_and_get_answer_with_error("SELECT * FROM test")
assert ret == "" and err != ""
replace_config("<header>Authorization: Bearer INVALID_TOKEN", "<header>Authorization: Bearer TOKEN")
instance.query("SYSTEM RELOAD CONFIG")
assert run_query(instance, "SELECT * FROM test") == '1\t2\t3\n'
instance.query("DROP TABLE test")
def test_custom_auth_headers_exclusion(started_cluster):
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
filename = "test.csv"
get_query = f"SELECT * FROM s3('http://resolver:8080/{started_cluster.minio_restricted_bucket}/restricteddirectory/{filename}', 'CSV', '{table_format}')"
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
with pytest.raises(helpers.client.QueryRuntimeException) as ei:
result = run_query(instance, get_query)
print(result)
assert ei.value.returncode == 243
assert 'Forbidden Error' in ei.value.stderr
def test_infinite_redirect(started_cluster):
bucket = "redirected"
table_format = "column1 UInt32, column2 UInt32, column3 UInt32"
filename = "test.csv"
get_query = f"select * from s3('http://resolver:{started_cluster.minio_redirect_port}/{bucket}/{filename}', 'CSV', '{table_format}')"
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
exception_raised = False
try:
run_query(instance, get_query)
except Exception as e:
assert str(e).find("Too many redirects while trying to access") != -1
exception_raised = True
finally:
assert exception_raised
@pytest.mark.parametrize("extension,method", [
pytest.param("bin", "gzip", id="bin"),
pytest.param("gz", "auto", id="gz"),
])
def test_storage_s3_get_gzip(started_cluster, extension, method):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
filename = f"test_get_gzip.{extension}"
name = f"test_get_gzip_{extension}"
data = [
"Sophia Intrieri,55",
"Jack Taylor,71",
"Christopher Silva,66",
"Clifton Purser,35",
"Richard Aceuedo,43",
"Lisa Hensley,31",
"Alice Wehrley,1",
"Mary Farmer,47",
"Samara Ramirez,19",
"Shirley Lloyd,51",
"Santos Cowger,0",
"Richard Mundt,88",
"Jerry Gonzalez,15",
"Angela James,10",
"Norman Ortega,33",
""
]
run_query(instance, f"DROP TABLE IF EXISTS {name}")
buf = io.BytesIO()
compressed = gzip.GzipFile(fileobj=buf, mode="wb")
compressed.write(("\n".join(data)).encode())
compressed.close()
put_s3_file_content(started_cluster, bucket, filename, buf.getvalue())
run_query(instance, f"""CREATE TABLE {name} (name String, id UInt32) ENGINE = S3(
'http://{started_cluster.minio_ip}:{MINIO_INTERNAL_PORT}/{bucket}/{filename}',
'CSV',
'{method}')""")
run_query(instance, f"SELECT sum(id) FROM {name}").splitlines() == ["565"]
run_query(instance, f"DROP TABLE {name}")
def test_storage_s3_get_unstable(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
table_format = "column1 Int64, column2 Int64, column3 Int64, column4 Int64"
get_query = f"SELECT count(), sum(column3), sum(column4) FROM s3('http://resolver:8081/{started_cluster.minio_bucket}/test.csv', 'CSV', '{table_format}') FORMAT CSV"
result = run_query(instance, get_query)
assert result.splitlines() == ["500001,500000,0"]
def test_storage_s3_put_uncompressed(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
filename = "test_put_uncompressed.bin"
name = "test_put_uncompressed"
data = [
"'Gloria Thompson',99",
"'Matthew Tang',98",
"'Patsy Anderson',23",
"'Nancy Badillo',93",
"'Roy Hunt',5",
"'Adam Kirk',51",
"'Joshua Douds',28",
"'Jolene Ryan',0",
"'Roxanne Padilla',50",
"'Howard Roberts',41",
"'Ricardo Broughton',13",
"'Roland Speer',83",
"'Cathy Cohan',58",
"'Kathie Dawson',100",
"'Gregg Mcquistion',11",
]
run_query(instance, "CREATE TABLE {} (name String, id UInt32) ENGINE = S3('http://{}:{}/{}/{}', 'CSV')".format(
name, started_cluster.minio_ip, MINIO_INTERNAL_PORT, bucket, filename))
run_query(instance, "INSERT INTO {} VALUES ({})".format(name, "),(".join(data)))
run_query(instance, "SELECT sum(id) FROM {}".format(name)).splitlines() == ["753"]
uncompressed_content = get_s3_file_content(started_cluster, bucket, filename)
assert sum([ int(i.split(',')[1]) for i in uncompressed_content.splitlines() ]) == 753
@pytest.mark.parametrize("extension,method", [
pytest.param("bin", "gzip", id="bin"),
pytest.param("gz", "auto", id="gz")
])
def test_storage_s3_put_gzip(started_cluster, extension, method):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
filename = f"test_put_gzip.{extension}"
name = f"test_put_gzip_{extension}"
data = [
"'Joseph Tomlinson',5",
"'Earnest Essary',44",
"'Matha Pannell',24",
"'Michael Shavers',46",
"'Elias Groce',38",
"'Pamela Bramlet',50",
"'Lewis Harrell',49",
"'Tamara Fyall',58",
"'George Dixon',38",
"'Alice Walls',49",
"'Paula Mais',24",
"'Myrtle Pelt',93",
"'Sylvia Naffziger',18",
"'Amanda Cave',83",
"'Yolanda Joseph',89"
]
run_query(instance, f"""CREATE TABLE {name} (name String, id UInt32) ENGINE = S3(
'http://{started_cluster.minio_ip}:{MINIO_INTERNAL_PORT}/{bucket}/{filename}',
'CSV',
'{method}')""")
run_query(instance, f"INSERT INTO {name} VALUES ({'),('.join(data)})")
run_query(instance, f"SELECT sum(id) FROM {name}").splitlines() == ["708"]
buf = io.BytesIO(get_s3_file_content(started_cluster, bucket, filename, decode=False))
f = gzip.GzipFile(fileobj=buf, mode="rb")
uncompressed_content = f.read().decode()
assert sum([ int(i.split(',')[1]) for i in uncompressed_content.splitlines() ]) == 708
def test_truncate_table(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
name = "truncate"
instance.query("CREATE TABLE {} (id UInt32) ENGINE = S3('http://{}:{}/{}/{}', 'CSV')".format(
name, started_cluster.minio_ip, MINIO_INTERNAL_PORT, bucket, name))
instance.query("INSERT INTO {} SELECT number FROM numbers(10)".format(name))
result = instance.query("SELECT * FROM {}".format(name))
assert result == instance.query("SELECT number FROM numbers(10)")
instance.query("TRUNCATE TABLE {}".format(name))
minio = started_cluster.minio_client
timeout = 30
while timeout > 0:
if len(list(minio.list_objects(started_cluster.minio_bucket, 'truncate/'))) == 0:
return
timeout -= 1
time.sleep(1)
assert(len(list(minio.list_objects(started_cluster.minio_bucket, 'truncate/'))) == 0)
assert instance.query("SELECT * FROM {}".format(name)) == ""
def test_predefined_connection_configuration(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
name = "test_table"
instance.query("drop table if exists {}".format(name))
instance.query("CREATE TABLE {} (id UInt32) ENGINE = S3(s3_conf1, format='CSV')".format(name))
instance.query("INSERT INTO {} SELECT number FROM numbers(10)".format(name))
result = instance.query("SELECT * FROM {}".format(name))
assert result == instance.query("SELECT number FROM numbers(10)")
result = instance.query("SELECT * FROM s3(s3_conf1, format='CSV', structure='id UInt32')")
assert result == instance.query("SELECT number FROM numbers(10)")
result = ""
def test_url_reconnect_in_the_middle(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
table_format = "id String, data String"
filename = "test_url_reconnect_{}.tsv".format(random.randint(0, 1000))
instance.query(f"""insert into table function
s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/{filename}', 'TSV', '{table_format}')
select number, randomPrintableASCII(number % 1000) from numbers(1000000)""")
with PartitionManager() as pm:
pm_rule_reject = {'probability': 0.02, 'destination': instance.ip_address, 'source_port': started_cluster.minio_port, 'action': 'REJECT --reject-with tcp-reset'}
pm_rule_drop_all = {'destination': instance.ip_address, 'source_port': started_cluster.minio_port, 'action': 'DROP'}
pm._add_rule(pm_rule_reject)
def select():
global result
result = instance.query(
f"""select sum(cityHash64(x)) from (select toUInt64(id) + sleep(0.1) as x from
url('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/{filename}', 'TSV', '{table_format}')
settings http_max_tries = 10, http_retry_max_backoff_ms=2000, http_send_timeout=1, http_receive_timeout=1)""")
assert(int(result) == 3914219105369203805)
thread = threading.Thread(target=select)
thread.start()
time.sleep(4)
pm._add_rule(pm_rule_drop_all)
time.sleep(2)
pm._delete_rule(pm_rule_drop_all)
pm._delete_rule(pm_rule_reject)
thread.join()
assert(int(result) == 3914219105369203805)
def test_seekable_formats(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"] # type: ClickHouseInstance
table_function = f"s3(s3_parquet, structure='a Int32, b String', format='Parquet')"
instance.query(f"insert into table function {table_function} SELECT number, randomString(100) FROM numbers(5000000) settings s3_truncate_on_insert=1")
result = instance.query(f"SELECT count() FROM {table_function}")
assert(int(result) == 5000000)
table_function = f"s3(s3_orc, structure='a Int32, b String', format='ORC')"
exec_query_with_retry(instance, f"insert into table function {table_function} SELECT number, randomString(100) FROM numbers(5000000) settings s3_truncate_on_insert=1")
result = instance.query(f"SELECT count() FROM {table_function}")
assert(int(result) == 5000000)
instance.query("SYSTEM FLUSH LOGS")
result = instance.query(f"SELECT formatReadableSize(memory_usage) FROM system.query_log WHERE startsWith(query, 'SELECT count() FROM s3') AND memory_usage > 0 ORDER BY event_time desc")
print(result[:3])
assert(int(result[:3]) < 200)
def test_seekable_formats_url(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
table_function = f"s3(s3_parquet, structure='a Int32, b String', format='Parquet')"
instance.query(f"insert into table function {table_function} select number, randomString(100) from numbers(5000000) settings s3_truncate_on_insert=1")
table_function = f"url('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test_parquet', 'Parquet', 'a Int32, b String')"
result = instance.query(f"SELECT count() FROM {table_function}")
assert(int(result) == 5000000)
table_function = f"s3(s3_orc, structure='a Int32, b String', format='ORC')"
exec_query_with_retry(instance, f"insert into table function {table_function} select number, randomString(100) from numbers(5000000) settings s3_truncate_on_insert=1")
table_function = f"url('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test_orc', 'ORC', 'a Int32, b String')"
result = instance.query(f"SELECT count() FROM {table_function}")
assert(int(result) == 5000000)
instance.query("SYSTEM FLUSH LOGS")
result = instance.query(f"SELECT formatReadableSize(memory_usage) FROM system.query_log WHERE startsWith(query, 'SELECT count() FROM url') AND memory_usage > 0 ORDER BY event_time desc")
print(result[:3])
assert(int(result[:3]) < 200)
def test_empty_file(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
name = "empty"
url = f'http://{started_cluster.minio_ip}:{MINIO_INTERNAL_PORT}/{bucket}/{name}'
minio = started_cluster.minio_client
minio.put_object(bucket, name, io.BytesIO(b""), 0)
table_function = f"s3('{url}', 'CSV', 'id Int32')"
result = instance.query(f"SELECT count() FROM {table_function}")
assert(int(result) == 0)
def test_insert_with_path_with_globs(started_cluster):
instance = started_cluster.instances["dummy"]
table_function_3 = f"s3('http://minio1:9001/root/test_parquet*', 'minio', 'minio123', 'Parquet', 'a Int32, b String')"
instance.query_and_get_error(f"insert into table function {table_function_3} SELECT number, randomString(100) FROM numbers(500)")
def test_s3_schema_inference(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
instance.query(f"insert into table function s3(s3_native, structure='a Int32, b String', format='Native') select number, randomString(100) from numbers(5000000)")
result = instance.query(f"desc s3(s3_native, format='Native')")
assert result == "a\tInt32\t\t\t\t\t\nb\tString\t\t\t\t\t\n"
result = instance.query(f"select count(*) from s3(s3_native, format='Native')")
assert(int(result) == 5000000)
instance.query(f"create table schema_inference engine=S3(s3_native, format='Native')")
result = instance.query(f"desc schema_inference")
assert result == "a\tInt32\t\t\t\t\t\nb\tString\t\t\t\t\t\n"
result = instance.query(f"select count(*) from schema_inference")
assert(int(result) == 5000000)
table_function = f"url('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test_native', 'Native')"
result = instance.query(f"desc {table_function}")
assert result == "a\tInt32\t\t\t\t\t\nb\tString\t\t\t\t\t\n"
result = instance.query(f"select count(*) from {table_function}")
assert(int(result) == 5000000)
instance.query(f"create table schema_inference_2 engine=URL('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test_native', 'Native')")
result = instance.query(f"desc schema_inference_2")
assert result == "a\tInt32\t\t\t\t\t\nb\tString\t\t\t\t\t\n"
result = instance.query(f"select count(*) from schema_inference_2")
assert(int(result) == 5000000)
table_function = f"s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test_native', 'Native')"
result = instance.query(f"desc {table_function}")
assert result == "a\tInt32\t\t\t\t\t\nb\tString\t\t\t\t\t\n"
result = instance.query(f"select count(*) from {table_function}")
assert(int(result) == 5000000)
def test_empty_file(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
name = "empty"
url = f'http://{started_cluster.minio_ip}:{MINIO_INTERNAL_PORT}/{bucket}/{name}'
minio = started_cluster.minio_client
minio.put_object(bucket, name, io.BytesIO(b""), 0)
table_function = f"s3('{url}', 'CSV', 'id Int32')"
result = instance.query(f"SELECT count() FROM {table_function}")
assert(int(result) == 0)
def test_overwrite(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
table_function = f"s3(s3_parquet, structure='a Int32, b String', format='Parquet')"
instance.query(f"create table test_overwrite as {table_function}")
instance.query(f"truncate table test_overwrite")
instance.query(f"insert into test_overwrite select number, randomString(100) from numbers(50) settings s3_truncate_on_insert=1")
instance.query_and_get_error(f"insert into test_overwrite select number, randomString(100) from numbers(100)")
instance.query(f"insert into test_overwrite select number, randomString(100) from numbers(200) settings s3_truncate_on_insert=1")
result = instance.query(f"select count() from test_overwrite")
assert(int(result) == 200)
def test_create_new_files_on_insert(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
table_function = f"s3(s3_parquet, structure='a Int32, b String', format='Parquet')"
instance.query(f"create table test_multiple_inserts as {table_function}")
instance.query(f"truncate table test_multiple_inserts")
instance.query(f"insert into test_multiple_inserts select number, randomString(100) from numbers(10) settings s3_truncate_on_insert=1")
instance.query(f"insert into test_multiple_inserts select number, randomString(100) from numbers(20) settings s3_create_new_file_on_insert=1")
instance.query(f"insert into test_multiple_inserts select number, randomString(100) from numbers(30) settings s3_create_new_file_on_insert=1")
result = instance.query(f"select count() from test_multiple_inserts")
assert(int(result) == 60)
instance.query(f"drop table test_multiple_inserts")
table_function = f"s3(s3_parquet_gz, structure='a Int32, b String', format='Parquet')"
instance.query(f"create table test_multiple_inserts as {table_function}")
instance.query(f"truncate table test_multiple_inserts")
instance.query(f"insert into test_multiple_inserts select number, randomString(100) from numbers(10) settings s3_truncate_on_insert=1")
instance.query(f"insert into test_multiple_inserts select number, randomString(100) from numbers(20) settings s3_create_new_file_on_insert=1")
instance.query(f"insert into test_multiple_inserts select number, randomString(100) from numbers(30) settings s3_create_new_file_on_insert=1")
result = instance.query(f"select count() from test_multiple_inserts")
assert(int(result) == 60)
def test_format_detection(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
instance.query(f"create table arrow_table_s3 (x UInt64) engine=S3(s3_arrow)")
instance.query(f"insert into arrow_table_s3 select 1")
result = instance.query(f"select * from s3(s3_arrow)")
assert(int(result) == 1)
result = instance.query(f"select * from url('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test.arrow')")
assert(int(result) == 1)
result = instance.query(f"select * from s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test.arrow')")
assert(int(result) == 1)
instance.query(f"create table parquet_table_s3 (x UInt64) engine=S3(s3_parquet2)")
instance.query(f"insert into parquet_table_s3 select 1")
result = instance.query(f"select * from s3(s3_parquet2)")
assert(int(result) == 1)
result = instance.query(f"select * from url('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test.parquet')")
assert(int(result) == 1)
result = instance.query(f"select * from s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test.parquet')")
assert(int(result) == 1)
def test_schema_inference_from_globs(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
instance.query(f"insert into table function s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test1.jsoncompacteachrow', 'JSONCompactEachRow', 'x Nullable(UInt32)') select NULL")
instance.query(f"insert into table function s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test2.jsoncompacteachrow', 'JSONCompactEachRow', 'x Nullable(UInt32)') select 0")
url_filename = "test{1,2}.jsoncompacteachrow"
result = instance.query(f"desc url('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/{url_filename}')")
assert(result.strip() == 'c1\tNullable(Float64)')
result = instance.query(f"select * from url('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/{url_filename}')")
assert(sorted(result.split()) == ['0', '\\N'])
result = instance.query(f"desc s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test*.jsoncompacteachrow')")
assert(result.strip() == 'c1\tNullable(Float64)')
result = instance.query(f"select * from s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test*.jsoncompacteachrow')")
assert(sorted(result.split()) == ['0', '\\N'])
def test_signatures(started_cluster):
bucket = started_cluster.minio_bucket
instance = started_cluster.instances["dummy"]
instance.query(f"create table test_signatures (x UInt64) engine=S3(s3_arrow)")
instance.query(f"truncate table test_signatures")
instance.query(f"insert into test_signatures select 1")
result = instance.query(f"select * from s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test.arrow')")
assert(int(result) == 1)
result = instance.query(f"select * from s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test.arrow', 'Arrow', 'x UInt64')")
assert(int(result) == 1)
result = instance.query(f"select * from s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test.arrow', 'minio', 'minio123')")
assert(int(result) == 1)
result = instance.query(f"select * from s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test.arrow', 'Arrow', 'x UInt64', 'auto')")
assert(int(result) == 1)
result = instance.query(f"select * from s3('http://{started_cluster.minio_host}:{started_cluster.minio_port}/{bucket}/test.arrow', 'minio', 'minio123', 'Arrow')")
assert(int(result) == 1)