ClickHouse/dbms/Storages/Distributed/DirectoryMonitor.cpp
Ivan 97f2a2213e
Move all folders inside /dbms one level up (#9974)
* Move some code outside dbms/src folder
* Fix paths
2020-04-02 02:51:21 +03:00

722 lines
23 KiB
C++

#include <DataStreams/RemoteBlockOutputStream.h>
#include <DataStreams/NativeBlockInputStream.h>
#include <Common/escapeForFileName.h>
#include <Common/setThreadName.h>
#include <Common/CurrentMetrics.h>
#include <Common/StringUtils/StringUtils.h>
#include <Common/ClickHouseRevision.h>
#include <Common/SipHash.h>
#include <Common/quoteString.h>
#include <Common/hex.h>
#include <common/StringRef.h>
#include <Interpreters/Context.h>
#include <Storages/Distributed/DirectoryMonitor.h>
#include <IO/ReadBufferFromFile.h>
#include <IO/ReadBufferFromString.h>
#include <IO/WriteBufferFromFile.h>
#include <Compression/CompressedReadBuffer.h>
#include <IO/ConnectionTimeouts.h>
#include <IO/Operators.h>
#include <boost/algorithm/string/find_iterator.hpp>
#include <boost/algorithm/string/finder.hpp>
#include <Poco/DirectoryIterator.h>
namespace CurrentMetrics
{
extern const Metric DistributedSend;
extern const Metric DistributedFilesToInsert;
}
namespace DB
{
namespace ErrorCodes
{
extern const int CANNOT_READ_ALL_DATA;
extern const int UNKNOWN_CODEC;
extern const int CANNOT_DECOMPRESS;
extern const int CHECKSUM_DOESNT_MATCH;
extern const int TOO_LARGE_SIZE_COMPRESSED;
extern const int ATTEMPT_TO_READ_AFTER_EOF;
}
namespace
{
constexpr const std::chrono::minutes decrease_error_count_period{5};
template <typename PoolFactory>
ConnectionPoolPtrs createPoolsForAddresses(const std::string & name, PoolFactory && factory)
{
ConnectionPoolPtrs pools;
for (auto it = boost::make_split_iterator(name, boost::first_finder(",")); it != decltype(it){}; ++it)
{
Cluster::Address address = Cluster::Address::fromFullString(boost::copy_range<std::string>(*it));
pools.emplace_back(factory(address));
}
return pools;
}
void assertChecksum(CityHash_v1_0_2::uint128 expected, CityHash_v1_0_2::uint128 calculated)
{
if (expected != calculated)
{
String message = "Checksum of extra info doesn't match: corrupted data."
" Reference: " + getHexUIntLowercase(expected.first) + getHexUIntLowercase(expected.second)
+ ". Actual: " + getHexUIntLowercase(calculated.first) + getHexUIntLowercase(calculated.second)
+ ".";
throw Exception(message, ErrorCodes::CHECKSUM_DOESNT_MATCH);
}
}
}
StorageDistributedDirectoryMonitor::StorageDistributedDirectoryMonitor(
StorageDistributed & storage_, std::string path_, ConnectionPoolPtr pool_, ActionBlocker & monitor_blocker_)
/// It's important to initialize members before `thread` to avoid race.
: storage(storage_)
, pool(std::move(pool_))
, path{path_ + '/'}
, should_batch_inserts(storage.global_context.getSettingsRef().distributed_directory_monitor_batch_inserts)
, min_batched_block_size_rows(storage.global_context.getSettingsRef().min_insert_block_size_rows)
, min_batched_block_size_bytes(storage.global_context.getSettingsRef().min_insert_block_size_bytes)
, current_batch_file_path{path + "current_batch.txt"}
, default_sleep_time{storage.global_context.getSettingsRef().distributed_directory_monitor_sleep_time_ms.totalMilliseconds()}
, sleep_time{default_sleep_time}
, max_sleep_time{storage.global_context.getSettingsRef().distributed_directory_monitor_max_sleep_time_ms.totalMilliseconds()}
, log{&Logger::get(getLoggerName())}
, monitor_blocker(monitor_blocker_)
{
}
StorageDistributedDirectoryMonitor::~StorageDistributedDirectoryMonitor()
{
if (!quit)
{
{
quit = true;
std::lock_guard lock{mutex};
}
cond.notify_one();
thread.join();
}
}
void StorageDistributedDirectoryMonitor::flushAllData()
{
if (!quit)
{
std::unique_lock lock{mutex};
processFiles();
}
}
void StorageDistributedDirectoryMonitor::shutdownAndDropAllData()
{
if (!quit)
{
{
quit = true;
std::lock_guard lock{mutex};
}
cond.notify_one();
thread.join();
}
Poco::File(path).remove(true);
}
void StorageDistributedDirectoryMonitor::run()
{
setThreadName("DistrDirMonitor");
std::unique_lock lock{mutex};
const auto quit_requested = [this] { return quit.load(std::memory_order_relaxed); };
while (!quit_requested())
{
auto do_sleep = true;
if (!monitor_blocker.isCancelled())
{
try
{
do_sleep = !processFiles();
}
catch (...)
{
do_sleep = true;
++error_count;
sleep_time = std::min(
std::chrono::milliseconds{Int64(default_sleep_time.count() * std::exp2(error_count))},
max_sleep_time);
tryLogCurrentException(getLoggerName().data());
}
}
else
{
LOG_DEBUG(log, "Skipping send data over distributed table.");
}
if (do_sleep)
cond.wait_for(lock, sleep_time, quit_requested);
const auto now = std::chrono::system_clock::now();
if (now - last_decrease_time > decrease_error_count_period)
{
error_count /= 2;
last_decrease_time = now;
}
}
}
ConnectionPoolPtr StorageDistributedDirectoryMonitor::createPool(const std::string & name, const StorageDistributed & storage)
{
const auto pool_factory = [&storage] (const Cluster::Address & address) -> ConnectionPoolPtr
{
const auto & cluster = storage.getCluster();
const auto & shards_info = cluster->getShardsInfo();
const auto & shards_addresses = cluster->getShardsAddresses();
/// check new format shard{shard_index}_number{number_index}
if (address.shard_index != 0)
{
return shards_info[address.shard_index - 1].per_replica_pools[address.replica_index - 1];
}
/// existing connections pool have a higher priority
for (size_t shard_index = 0; shard_index < shards_info.size(); ++shard_index)
{
const Cluster::Addresses & replicas_addresses = shards_addresses[shard_index];
for (size_t replica_index = 0; replica_index < replicas_addresses.size(); ++replica_index)
{
const Cluster::Address & replica_address = replicas_addresses[replica_index];
if (address.user == replica_address.user &&
address.password == replica_address.password &&
address.host_name == replica_address.host_name &&
address.port == replica_address.port &&
address.default_database == replica_address.default_database &&
address.secure == replica_address.secure)
{
return shards_info[shard_index].per_replica_pools[replica_index];
}
}
}
return std::make_shared<ConnectionPool>(
1, address.host_name, address.port, address.default_database, address.user, address.password,
storage.getName() + '_' + address.user, Protocol::Compression::Enable, address.secure);
};
auto pools = createPoolsForAddresses(name, pool_factory);
const auto settings = storage.global_context.getSettings();
return pools.size() == 1 ? pools.front() : std::make_shared<ConnectionPoolWithFailover>(pools, LoadBalancing::RANDOM,
settings.distributed_replica_error_half_life.totalSeconds(), settings.distributed_replica_error_cap);
}
bool StorageDistributedDirectoryMonitor::processFiles()
{
std::map<UInt64, std::string> files;
Poco::DirectoryIterator end;
for (Poco::DirectoryIterator it{path}; it != end; ++it)
{
const auto & file_path_str = it->path();
Poco::Path file_path{file_path_str};
if (!it->isDirectory() && startsWith(file_path.getExtension(), "bin"))
files[parse<UInt64>(file_path.getBaseName())] = file_path_str;
}
if (files.empty())
return false;
CurrentMetrics::Increment metric_increment{CurrentMetrics::DistributedFilesToInsert, CurrentMetrics::Value(files.size())};
if (should_batch_inserts)
{
processFilesWithBatching(files);
}
else
{
for (const auto & file : files)
{
if (quit)
return true;
processFile(file.second);
}
}
return true;
}
void StorageDistributedDirectoryMonitor::processFile(const std::string & file_path)
{
LOG_TRACE(log, "Started processing `" << file_path << '`');
auto timeouts = ConnectionTimeouts::getTCPTimeoutsWithFailover(storage.global_context.getSettingsRef());
auto connection = pool->get(timeouts);
try
{
CurrentMetrics::Increment metric_increment{CurrentMetrics::DistributedSend};
ReadBufferFromFile in{file_path};
Settings insert_settings;
std::string insert_query;
ClientInfo client_info;
readHeader(in, insert_settings, insert_query, client_info, log);
RemoteBlockOutputStream remote{*connection, timeouts, insert_query, &insert_settings, &client_info};
remote.writePrefix();
remote.writePrepared(in);
remote.writeSuffix();
}
catch (const Exception & e)
{
maybeMarkAsBroken(file_path, e);
throw;
}
Poco::File{file_path}.remove();
LOG_TRACE(log, "Finished processing `" << file_path << '`');
}
void StorageDistributedDirectoryMonitor::readHeader(
ReadBuffer & in, Settings & insert_settings, std::string & insert_query, ClientInfo & client_info, Logger * log)
{
UInt64 query_size;
readVarUInt(query_size, in);
if (query_size == DBMS_DISTRIBUTED_SIGNATURE_HEADER)
{
/// Read the header as a string.
String header;
readStringBinary(header, in);
/// Check the checksum of the header.
CityHash_v1_0_2::uint128 checksum;
readPODBinary(checksum, in);
assertChecksum(checksum, CityHash_v1_0_2::CityHash128(header.data(), header.size()));
/// Read the parts of the header.
ReadBufferFromString header_buf(header);
UInt64 initiator_revision;
readVarUInt(initiator_revision, header_buf);
if (ClickHouseRevision::get() < initiator_revision)
{
LOG_WARNING(
log,
"ClickHouse shard version is older than ClickHouse initiator version. "
<< "It may lack support for new features.");
}
readStringBinary(insert_query, header_buf);
insert_settings.deserialize(header_buf);
if (header_buf.hasPendingData())
client_info.read(header_buf, initiator_revision);
/// Add handling new data here, for example:
/// if (header_buf.hasPendingData())
/// readVarUInt(my_new_data, header_buf);
return;
}
if (query_size == DBMS_DISTRIBUTED_SIGNATURE_HEADER_OLD_FORMAT)
{
insert_settings.deserialize(in, SettingsBinaryFormat::OLD);
readStringBinary(insert_query, in);
return;
}
insert_query.resize(query_size);
in.readStrict(insert_query.data(), query_size);
}
struct StorageDistributedDirectoryMonitor::BatchHeader
{
Settings settings;
String query;
ClientInfo client_info;
Block sample_block;
BatchHeader(Settings settings_, String query_, ClientInfo client_info_, Block sample_block_)
: settings(std::move(settings_))
, query(std::move(query_))
, client_info(std::move(client_info_))
, sample_block(std::move(sample_block_))
{
}
bool operator==(const BatchHeader & other) const
{
return settings == other.settings && query == other.query && client_info.query_kind == other.client_info.query_kind
&& blocksHaveEqualStructure(sample_block, other.sample_block);
}
struct Hash
{
size_t operator()(const BatchHeader & batch_header) const
{
SipHash hash_state;
hash_state.update(batch_header.query.data(), batch_header.query.size());
size_t num_columns = batch_header.sample_block.columns();
for (size_t i = 0; i < num_columns; ++i)
{
const String & type_name = batch_header.sample_block.getByPosition(i).type->getName();
hash_state.update(type_name.data(), type_name.size());
}
return hash_state.get64();
}
};
};
struct StorageDistributedDirectoryMonitor::Batch
{
std::vector<UInt64> file_indices;
size_t total_rows = 0;
size_t total_bytes = 0;
bool recovered = false;
StorageDistributedDirectoryMonitor & parent;
const std::map<UInt64, String> & file_index_to_path;
Batch(
StorageDistributedDirectoryMonitor & parent_,
const std::map<UInt64, String> & file_index_to_path_)
: parent(parent_), file_index_to_path(file_index_to_path_)
{}
bool isEnoughSize() const
{
return (!parent.min_batched_block_size_rows && !parent.min_batched_block_size_bytes)
|| (parent.min_batched_block_size_rows && total_rows >= parent.min_batched_block_size_rows)
|| (parent.min_batched_block_size_bytes && total_bytes >= parent.min_batched_block_size_bytes);
}
void send()
{
if (file_indices.empty())
return;
CurrentMetrics::Increment metric_increment{CurrentMetrics::DistributedSend};
if (!recovered)
{
/// For deduplication in Replicated tables to work, in case of error
/// we must try to re-send exactly the same batches.
/// So we save contents of the current batch into the current_batch_file_path file
/// and truncate it afterwards if all went well.
/// Temporary file is required for atomicity.
String tmp_file{parent.current_batch_file_path + ".tmp"};
if (Poco::File{tmp_file}.exists())
LOG_ERROR(parent.log, "Temporary file " << backQuote(tmp_file) << " exists. Unclean shutdown?");
{
WriteBufferFromFile out{tmp_file, O_WRONLY | O_TRUNC | O_CREAT};
writeText(out);
}
Poco::File{tmp_file}.renameTo(parent.current_batch_file_path);
}
auto timeouts = ConnectionTimeouts::getTCPTimeoutsWithFailover(parent.storage.global_context.getSettingsRef());
auto connection = parent.pool->get(timeouts);
bool batch_broken = false;
try
{
Settings insert_settings;
String insert_query;
ClientInfo client_info;
std::unique_ptr<RemoteBlockOutputStream> remote;
bool first = true;
for (UInt64 file_idx : file_indices)
{
auto file_path = file_index_to_path.find(file_idx);
if (file_path == file_index_to_path.end())
{
LOG_ERROR(parent.log, "Failed to send batch: file with index " << file_idx << " is absent");
batch_broken = true;
break;
}
ReadBufferFromFile in(file_path->second);
parent.readHeader(in, insert_settings, insert_query, client_info, parent.log);
if (first)
{
first = false;
remote = std::make_unique<RemoteBlockOutputStream>(*connection, timeouts, insert_query, &insert_settings, &client_info);
remote->writePrefix();
}
remote->writePrepared(in);
}
if (remote)
remote->writeSuffix();
}
catch (const Exception & e)
{
if (isFileBrokenErrorCode(e.code()))
{
tryLogCurrentException(parent.log, "Failed to send batch due to");
batch_broken = true;
}
else
throw;
}
if (!batch_broken)
{
LOG_TRACE(parent.log, "Sent a batch of " << file_indices.size() << " files.");
for (UInt64 file_index : file_indices)
Poco::File{file_index_to_path.at(file_index)}.remove();
}
else
{
LOG_ERROR(parent.log, "Marking a batch of " << file_indices.size() << " files as broken.");
for (UInt64 file_idx : file_indices)
{
auto file_path = file_index_to_path.find(file_idx);
if (file_path != file_index_to_path.end())
parent.markAsBroken(file_path->second);
}
}
file_indices.clear();
total_rows = 0;
total_bytes = 0;
recovered = false;
Poco::File{parent.current_batch_file_path}.setSize(0);
}
void writeText(WriteBuffer & out)
{
for (UInt64 file_idx : file_indices)
out << file_idx << '\n';
}
void readText(ReadBuffer & in)
{
while (!in.eof())
{
UInt64 idx;
in >> idx >> "\n";
file_indices.push_back(idx);
}
recovered = true;
}
};
class DirectoryMonitorBlockInputStream : public IBlockInputStream
{
public:
explicit DirectoryMonitorBlockInputStream(const String & file_name)
: in(file_name)
, decompressing_in(in)
, block_in(decompressing_in, ClickHouseRevision::get())
, log{&Logger::get("DirectoryMonitorBlockInputStream")}
{
Settings insert_settings;
String insert_query;
ClientInfo client_info;
StorageDistributedDirectoryMonitor::readHeader(in, insert_settings, insert_query, client_info, log);
block_in.readPrefix();
first_block = block_in.read();
header = first_block.cloneEmpty();
}
String getName() const override { return "DirectoryMonitor"; }
protected:
Block getHeader() const override { return header; }
Block readImpl() override
{
if (first_block)
return std::move(first_block);
return block_in.read();
}
void readSuffix() override { block_in.readSuffix(); }
private:
ReadBufferFromFile in;
CompressedReadBuffer decompressing_in;
NativeBlockInputStream block_in;
Block first_block;
Block header;
Logger * log;
};
BlockInputStreamPtr StorageDistributedDirectoryMonitor::createStreamFromFile(const String & file_name)
{
return std::make_shared<DirectoryMonitorBlockInputStream>(file_name);
}
void StorageDistributedDirectoryMonitor::processFilesWithBatching(const std::map<UInt64, std::string> & files)
{
std::unordered_set<UInt64> file_indices_to_skip;
if (Poco::File{current_batch_file_path}.exists())
{
/// Possibly, we failed to send a batch on the previous iteration. Try to send exactly the same batch.
Batch batch(*this, files);
ReadBufferFromFile in{current_batch_file_path};
batch.readText(in);
file_indices_to_skip.insert(batch.file_indices.begin(), batch.file_indices.end());
batch.send();
}
std::unordered_map<BatchHeader, Batch, BatchHeader::Hash> header_to_batch;
for (const auto & file : files)
{
if (quit)
return;
UInt64 file_idx = file.first;
const String & file_path = file.second;
if (file_indices_to_skip.count(file_idx))
continue;
size_t total_rows = 0;
size_t total_bytes = 0;
Block sample_block;
Settings insert_settings;
String insert_query;
ClientInfo client_info;
try
{
/// Determine metadata of the current file and check if it is not broken.
ReadBufferFromFile in{file_path};
readHeader(in, insert_settings, insert_query, client_info, log);
CompressedReadBuffer decompressing_in(in);
NativeBlockInputStream block_in(decompressing_in, ClickHouseRevision::get());
block_in.readPrefix();
while (Block block = block_in.read())
{
total_rows += block.rows();
total_bytes += block.bytes();
if (!sample_block)
sample_block = block.cloneEmpty();
}
block_in.readSuffix();
}
catch (const Exception & e)
{
if (maybeMarkAsBroken(file_path, e))
{
tryLogCurrentException(log, "File is marked broken due to");
continue;
}
else
throw;
}
BatchHeader batch_header(std::move(insert_settings), std::move(insert_query), std::move(client_info), std::move(sample_block));
Batch & batch = header_to_batch.try_emplace(batch_header, *this, files).first->second;
batch.file_indices.push_back(file_idx);
batch.total_rows += total_rows;
batch.total_bytes += total_bytes;
if (batch.isEnoughSize())
batch.send();
}
for (auto & kv : header_to_batch)
{
Batch & batch = kv.second;
batch.send();
}
Poco::File{current_batch_file_path}.remove();
}
bool StorageDistributedDirectoryMonitor::isFileBrokenErrorCode(int code)
{
return code == ErrorCodes::CHECKSUM_DOESNT_MATCH
|| code == ErrorCodes::TOO_LARGE_SIZE_COMPRESSED
|| code == ErrorCodes::CANNOT_READ_ALL_DATA
|| code == ErrorCodes::UNKNOWN_CODEC
|| code == ErrorCodes::CANNOT_DECOMPRESS
|| code == ErrorCodes::ATTEMPT_TO_READ_AFTER_EOF;
}
void StorageDistributedDirectoryMonitor::markAsBroken(const std::string & file_path) const
{
const auto last_path_separator_pos = file_path.rfind('/');
const auto & base_path = file_path.substr(0, last_path_separator_pos + 1);
const auto & file_name = file_path.substr(last_path_separator_pos + 1);
const auto & broken_path = base_path + "broken/";
const auto & broken_file_path = broken_path + file_name;
Poco::File{broken_path}.createDirectory();
Poco::File{file_path}.renameTo(broken_file_path);
LOG_ERROR(log, "Renamed `" << file_path << "` to `" << broken_file_path << '`');
}
bool StorageDistributedDirectoryMonitor::maybeMarkAsBroken(const std::string & file_path, const Exception & e) const
{
/// mark file as broken if necessary
if (isFileBrokenErrorCode(e.code()))
{
markAsBroken(file_path);
return true;
}
else
return false;
}
std::string StorageDistributedDirectoryMonitor::getLoggerName() const
{
return storage.getStorageID().getFullTableName() + ".DirectoryMonitor";
}
void StorageDistributedDirectoryMonitor::updatePath(const std::string & new_path)
{
std::lock_guard lock{mutex};
path = new_path;
current_batch_file_path = path + "current_batch.txt";
}
}