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231 lines
7.3 KiB
C++
231 lines
7.3 KiB
C++
#include "ORCBlockInputFormat.h"
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#include <boost/algorithm/string/case_conv.hpp>
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#if USE_ORC
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#include <Formats/FormatFactory.h>
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#include <Formats/ReadSchemaUtils.h>
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#include <IO/ReadBufferFromMemory.h>
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#include <IO/WriteHelpers.h>
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#include <IO/copyData.h>
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#include "ArrowBufferedStreams.h"
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#include "ArrowColumnToCHColumn.h"
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#include <DataTypes/NestedUtils.h>
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namespace DB
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{
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namespace ErrorCodes
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{
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extern const int BAD_ARGUMENTS;
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extern const int CANNOT_READ_ALL_DATA;
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}
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ORCBlockInputFormat::ORCBlockInputFormat(ReadBuffer & in_, Block header_, const FormatSettings & format_settings_)
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: IInputFormat(std::move(header_), in_), format_settings(format_settings_), skip_stripes(format_settings.orc.skip_stripes)
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{
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}
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Chunk ORCBlockInputFormat::generate()
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{
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block_missing_values.clear();
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if (!file_reader)
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prepareReader();
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if (is_stopped)
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return {};
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for (; stripe_current < stripe_total && skip_stripes.contains(stripe_current); ++stripe_current)
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;
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if (stripe_current >= stripe_total)
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return {};
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auto batch_result = file_reader->ReadStripe(stripe_current, include_indices);
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if (!batch_result.ok())
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throw ParsingException(ErrorCodes::CANNOT_READ_ALL_DATA, "Failed to create batch reader: {}", batch_result.status().ToString());
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auto batch = batch_result.ValueOrDie();
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if (!batch)
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return {};
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auto table_result = arrow::Table::FromRecordBatches({batch});
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if (!table_result.ok())
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throw ParsingException(
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ErrorCodes::CANNOT_READ_ALL_DATA, "Error while reading batch of ORC data: {}", table_result.status().ToString());
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auto table = table_result.ValueOrDie();
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if (!table || !table->num_rows())
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return {};
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++stripe_current;
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Chunk res;
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arrow_column_to_ch_column->arrowTableToCHChunk(res, table);
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/// If defaults_for_omitted_fields is true, calculate the default values from default expression for omitted fields.
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/// Otherwise fill the missing columns with zero values of its type.
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if (format_settings.defaults_for_omitted_fields)
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for (const auto & column_idx : missing_columns)
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block_missing_values.setBits(column_idx, res.getNumRows());
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return res;
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}
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void ORCBlockInputFormat::resetParser()
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{
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IInputFormat::resetParser();
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file_reader.reset();
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include_indices.clear();
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block_missing_values.clear();
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}
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const BlockMissingValues & ORCBlockInputFormat::getMissingValues() const
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{
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return block_missing_values;
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}
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static size_t countIndicesForType(std::shared_ptr<arrow::DataType> type)
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{
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if (type->id() == arrow::Type::LIST)
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return countIndicesForType(static_cast<arrow::ListType *>(type.get())->value_type()) + 1;
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if (type->id() == arrow::Type::STRUCT)
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{
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int indices = 1;
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auto * struct_type = static_cast<arrow::StructType *>(type.get());
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for (int i = 0; i != struct_type->num_fields(); ++i)
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indices += countIndicesForType(struct_type->field(i)->type());
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return indices;
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}
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if (type->id() == arrow::Type::MAP)
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{
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auto * map_type = static_cast<arrow::MapType *>(type.get());
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return countIndicesForType(map_type->key_type()) + countIndicesForType(map_type->item_type());
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}
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return 1;
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}
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static void getFileReaderAndSchema(
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ReadBuffer & in,
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std::unique_ptr<arrow::adapters::orc::ORCFileReader> & file_reader,
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std::shared_ptr<arrow::Schema> & schema,
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const FormatSettings & format_settings,
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std::atomic<int> & is_stopped)
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{
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auto arrow_file = asArrowFile(in, format_settings, is_stopped, "ORC", ORC_MAGIC_BYTES);
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if (is_stopped)
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return;
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auto result = arrow::adapters::orc::ORCFileReader::Open(arrow_file, arrow::default_memory_pool());
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if (!result.ok())
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throw Exception(result.status().ToString(), ErrorCodes::BAD_ARGUMENTS);
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file_reader = std::move(result).ValueOrDie();
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auto read_schema_result = file_reader->ReadSchema();
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if (!read_schema_result.ok())
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throw Exception(read_schema_result.status().ToString(), ErrorCodes::BAD_ARGUMENTS);
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schema = std::move(read_schema_result).ValueOrDie();
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}
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void ORCBlockInputFormat::prepareReader()
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{
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std::shared_ptr<arrow::Schema> schema;
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getFileReaderAndSchema(*in, file_reader, schema, format_settings, is_stopped);
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if (is_stopped)
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return;
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stripe_total = file_reader->NumberOfStripes();
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stripe_current = 0;
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arrow_column_to_ch_column = std::make_unique<ArrowColumnToCHColumn>(
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getPort().getHeader(),
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"ORC",
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format_settings.orc.import_nested,
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format_settings.orc.allow_missing_columns,
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format_settings.orc.case_insensitive_column_matching);
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missing_columns = arrow_column_to_ch_column->getMissingColumns(*schema);
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const bool ignore_case = format_settings.orc.case_insensitive_column_matching;
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std::unordered_set<String> nested_table_names;
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if (format_settings.orc.import_nested)
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nested_table_names = Nested::getAllTableNames(getPort().getHeader(), ignore_case);
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/// In ReadStripe column indices should be started from 1,
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/// because 0 indicates to select all columns.
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int index = 1;
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for (int i = 0; i < schema->num_fields(); ++i)
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{
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/// LIST type require 2 indices, STRUCT - the number of elements + 1,
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/// so we should recursively count the number of indices we need for this type.
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int indexes_count = countIndicesForType(schema->field(i)->type());
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const auto & name = schema->field(i)->name();
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if (getPort().getHeader().has(name, ignore_case) || nested_table_names.contains(ignore_case ? boost::to_lower_copy(name) : name))
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{
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for (int j = 0; j != indexes_count; ++j)
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include_indices.push_back(index + j);
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}
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index += indexes_count;
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}
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}
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ORCSchemaReader::ORCSchemaReader(ReadBuffer & in_, const FormatSettings & format_settings_)
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: ISchemaReader(in_), format_settings(format_settings_)
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{
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}
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NamesAndTypesList ORCSchemaReader::readSchema()
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{
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std::unique_ptr<arrow::adapters::orc::ORCFileReader> file_reader;
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std::shared_ptr<arrow::Schema> schema;
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std::atomic<int> is_stopped = 0;
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getFileReaderAndSchema(in, file_reader, schema, format_settings, is_stopped);
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auto header = ArrowColumnToCHColumn::arrowSchemaToCHHeader(
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*schema, "ORC", format_settings.orc.skip_columns_with_unsupported_types_in_schema_inference);
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return getNamesAndRecursivelyNullableTypes(header);
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}
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void registerInputFormatORC(FormatFactory & factory)
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{
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factory.registerInputFormat(
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"ORC",
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[](ReadBuffer &buf,
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const Block &sample,
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const RowInputFormatParams &,
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const FormatSettings & settings)
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{
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return std::make_shared<ORCBlockInputFormat>(buf, sample, settings);
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});
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factory.markFormatSupportsSubsetOfColumns("ORC");
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}
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void registerORCSchemaReader(FormatFactory & factory)
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{
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factory.registerSchemaReader(
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"ORC",
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[](ReadBuffer & buf, const FormatSettings & settings)
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{
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return std::make_shared<ORCSchemaReader>(buf, settings);
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}
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);
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}
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}
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#else
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namespace DB
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{
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class FormatFactory;
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void registerInputFormatORC(FormatFactory &)
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{
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}
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void registerORCSchemaReader(FormatFactory &)
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{
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}
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}
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#endif
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