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ClickHouse® is a real-time analytics DBMS
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Recently I noticed that clickhouse compiled with ASan does not work with newer glibc 2.36+, before I though that this was only about compiling with old but using new, however that was not correct, ASan simply does not work with glibc 2.36+. Here is a simple reproducer [1]: $ cat > test-asan.cpp <<EOL #include <pthread.h> int main() { // something broken in ASan in interceptor for __pthread_mutex_lock // and only since glibc 2.36, and for pthread_mutex_lock everything is OK pthread_mutex_t mutex = PTHREAD_MUTEX_INITIALIZER; return __pthread_mutex_lock(&mutex); } EOL $ clang -g3 -o test-asan test-asan.cpp -fsanitize=address $ ./test-asan AddressSanitizer:DEADLYSIGNAL ================================================================= ==15659==ERROR: AddressSanitizer: SEGV on unknown address 0x000000000000 (pc 0x000000000000 bp 0x7fffffffccb0 sp 0x7fffffffcb98 T0) ==15659==Hint: pc points to the zero page. ==15659==The signal is caused by a READ memory access. ==15659==Hint: address points to the zero page. #0 0x0 (<unknown module>) #1 0x7ffff7cda28f (/usr/lib/libc.so.6+0x2328f) (BuildId: 1e94beb079e278ac4f2c8bce1f53091548ea1584) AddressSanitizer can not provide additional info. SUMMARY: AddressSanitizer: SEGV (<unknown module>) ==15659==ABORTING [1]: https://gist.github.com/azat/af073e57a248e04488b21068643f079e I've started observing glibc code, there was some changes in glibc, that moves pthread functions out from libpthread.so.0 into libc.so.6 (somewhere between 2.31 and 2.35), but the problem pops up only with 2.36, 2.35 works fine. After this I've looked into changes between 2.35 and 2.36, and found this patch [2] - "dlsym: Make RTLD_NEXT prefer default version definition [BZ #14932]", that fixes this bug [3]. [2]: https://sourceware.org/git/?p=glibc.git;a=commit;h=efa7936e4c91b1c260d03614bb26858fbb8a0204 [3]: https://sourceware.org/bugzilla/show_bug.cgi?id=14932 The problem with using DL_LOOKUP_RETURN_NEWEST flag for RTLD_NEXT is that it does not resolve hidden symbols (and __pthread_mutex_lock is indeed hidden). Here is a sample that will show the difference [4]: $ cat > test-dlsym.c <<EOL #define _GNU_SOURCE #include <dlfcn.h> #include <stdio.h> int main() { void *p = dlsym(RTLD_NEXT, "__pthread_mutex_lock"); printf("__pthread_mutex_lock: %p (via RTLD_NEXT)\n", p); return 0; } EOL # glibc 2.35: __pthread_mutex_lock: 0x7ffff7e27f70 (via RTLD_NEXT) # glibc 2.36: __pthread_mutex_lock: (nil) (via RTLD_NEXT) [4]: https://gist.github.com/azat/3b5f2ae6011bef2ae86392cea7789eb7 But ThreadFuzzer uses internal symbols to wrap pthread_mutex_lock/pthread_mutex_unlock, which are intercepted by ASan and this leads to NULL dereference. The fix was obvious - just use dlsym(RTLD_NEXT), however on older glibc's this leads to endless recursion (see commits in the code). But only for jemalloc [5], and even though sanitizers does not uses jemalloc the code of ThreadFuzzer is generic and I don't want to guard it with more preprocessors macros. [5]: https://gist.github.com/azat/588d9c72c1e70fc13ebe113197883aa2 So we have to use RTLD_NEXT only for ASan. There is also one more interesting issue, if you will compile with clang that itself had been compiled with newer libc (i.e. 2.36), you will get the following error: $ podman run --privileged -v $PWD/.cmake-asan/programs:/root/bin -e PATH=/bin:/root/bin -e --rm -it ubuntu-dev-v3 clickhouse ==1==ERROR: AddressSanitizer failed to allocate 0x0 (0) bytes of SetAlternateSignalStack (error code: 22) ... ==1==End of process memory map. AddressSanitizer: CHECK failed: sanitizer_common.cpp:53 "((0 && "unable to mmap")) != (0)" (0x0, 0x0) (tid=1) <empty stack> The problem is that since GLIBC_2.31, `SIGSTKSZ` is a call to `getconf(_SC_MINSIGSTKSZ)`, but older glibc does not have it, so `-1` will be returned and used as `SIGSTKSZ` instead. The workaround to disable alternative stack: $ podman run --privileged -v $PWD/.cmake-asan/programs:/root/bin -e PATH=/bin:/root/bin -e ASAN_OPTIONS=use_sigaltstack=0 --rm -it ubuntu-dev-v3 clickhouse client --version ClickHouse client version 22.13.1.1. Fixes: #43426 Signed-off-by: Azat Khuzhin <a.khuzhin@semrush.com> |
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ClickHouse® is an open-source column-oriented database management system that allows generating analytical data reports in real-time.
Useful Links
- Official website has a quick high-level overview of ClickHouse on the main page.
- ClickHouse Cloud ClickHouse as a service, built by the creators and maintainers.
- Tutorial shows how to set up and query a small ClickHouse cluster.
- Documentation provides more in-depth information.
- YouTube channel has a lot of content about ClickHouse in video format.
- Slack and Telegram allow chatting with ClickHouse users in real-time.
- Blog contains various ClickHouse-related articles, as well as announcements and reports about events.
- Code Browser (Woboq) with syntax highlight and navigation.
- Code Browser (github.dev) with syntax highlight, powered by github.dev.
- Contacts can help to get your questions answered if there are any.
Upcoming events
- Recording available: v22.12 Release Webinar 22.12 is the ClickHouse Christmas release. There are plenty of gifts (a new JOIN algorithm among them) and we adopted something from MongoDB. Original creator, co-founder, and CTO of ClickHouse Alexey Milovidov will walk us through the highlights of the release.
- ClickHouse Meetup at the CHEQ office in Tel Aviv - Jan 16 - We are very excited to be holding our next in-person ClickHouse meetup at the CHEQ office in Tel Aviv! Hear from CHEQ, ServiceNow and Contentsquare, as well as a deep dive presentation from ClickHouse CTO Alexey Milovidov. Join us for a fun evening of talks, food and discussion!
- ClickHouse Meetup at Microsoft Office in Seattle - Jan 18 - Keep an eye on this space as we will be announcing speakers soon!