ClickHouse/tests/integration/test_merge_tree_hdfs/test.py
2023-06-29 13:26:21 +00:00

425 lines
14 KiB
Python

import logging
import time
import os
import pytest
from helpers.cluster import ClickHouseCluster
from helpers.utility import generate_values
from helpers.wait_for_helpers import wait_for_delete_inactive_parts
from helpers.wait_for_helpers import wait_for_delete_empty_parts
from pyhdfs import HdfsClient
SCRIPT_DIR = os.path.dirname(os.path.realpath(__file__))
CONFIG_PATH = os.path.join(
SCRIPT_DIR, "./_instances/node/configs/config.d/storage_conf.xml"
)
def create_table(cluster, table_name, additional_settings=None):
node = cluster.instances["node"]
create_table_statement = """
CREATE TABLE {} (
dt Date, id Int64, data String,
INDEX min_max (id) TYPE minmax GRANULARITY 3
) ENGINE=MergeTree()
PARTITION BY dt
ORDER BY (dt, id)
SETTINGS
storage_policy='hdfs',
old_parts_lifetime=0,
index_granularity=512,
temporary_directories_lifetime=1
""".format(
table_name
)
if additional_settings:
create_table_statement += ","
create_table_statement += additional_settings
node.query(create_table_statement)
FILES_OVERHEAD = 1
FILES_OVERHEAD_PER_COLUMN = 2 # Data and mark files
FILES_OVERHEAD_DEFAULT_COMPRESSION_CODEC = 1
FILES_OVERHEAD_METADATA_VERSION = 1
FILES_OVERHEAD_PER_PART_WIDE = (
FILES_OVERHEAD_PER_COLUMN * 3
+ 2
+ 6
+ FILES_OVERHEAD_DEFAULT_COMPRESSION_CODEC
+ FILES_OVERHEAD_METADATA_VERSION
)
FILES_OVERHEAD_PER_PART_COMPACT = (
10 + FILES_OVERHEAD_DEFAULT_COMPRESSION_CODEC + FILES_OVERHEAD_METADATA_VERSION
)
@pytest.fixture(scope="module")
def cluster():
try:
cluster = ClickHouseCluster(__file__)
cluster.add_instance(
"node", main_configs=["configs/config.d/storage_conf.xml"], with_hdfs=True
)
logging.info("Starting cluster...")
cluster.start()
logging.info("Cluster started")
fs = HdfsClient(hosts=cluster.hdfs_ip)
fs.mkdirs("/clickhouse")
logging.info("Created HDFS directory")
yield cluster
finally:
cluster.shutdown()
def wait_for_delete_hdfs_objects(cluster, expected, num_tries=30):
fs = HdfsClient(hosts=cluster.hdfs_ip)
while num_tries > 0:
num_hdfs_objects = len(fs.listdir("/clickhouse"))
if num_hdfs_objects == expected:
break
num_tries -= 1
time.sleep(1)
assert len(fs.listdir("/clickhouse")) == expected
@pytest.fixture(autouse=True)
def drop_table(cluster):
node = cluster.instances["node"]
fs = HdfsClient(hosts=cluster.hdfs_ip)
hdfs_objects = fs.listdir("/clickhouse")
print("Number of hdfs objects to delete:", len(hdfs_objects), sep=" ")
node.query("DROP TABLE IF EXISTS hdfs_test SYNC")
try:
wait_for_delete_hdfs_objects(cluster, 0)
finally:
hdfs_objects = fs.listdir("/clickhouse")
if len(hdfs_objects) == 0:
return
print(
"Manually removing extra objects to prevent tests cascade failing: ",
hdfs_objects,
)
for path in hdfs_objects:
fs.delete(path)
@pytest.mark.parametrize(
"min_rows_for_wide_part,files_per_part",
[(0, FILES_OVERHEAD_PER_PART_WIDE), (8192, FILES_OVERHEAD_PER_PART_COMPACT)],
)
def test_simple_insert_select(cluster, min_rows_for_wide_part, files_per_part):
create_table(
cluster,
"hdfs_test",
additional_settings="min_rows_for_wide_part={}".format(min_rows_for_wide_part),
)
node = cluster.instances["node"]
values1 = generate_values("2020-01-03", 4096)
node.query("INSERT INTO hdfs_test VALUES {}".format(values1))
assert (
node.query("SELECT * FROM hdfs_test order by dt, id FORMAT Values") == values1
)
fs = HdfsClient(hosts=cluster.hdfs_ip)
hdfs_objects = fs.listdir("/clickhouse")
print(hdfs_objects)
assert len(hdfs_objects) == FILES_OVERHEAD + files_per_part
values2 = generate_values("2020-01-04", 4096)
node.query("INSERT INTO hdfs_test VALUES {}".format(values2))
assert (
node.query("SELECT * FROM hdfs_test ORDER BY dt, id FORMAT Values")
== values1 + "," + values2
)
hdfs_objects = fs.listdir("/clickhouse")
assert len(hdfs_objects) == FILES_OVERHEAD + files_per_part * 2
assert (
node.query("SELECT count(*) FROM hdfs_test where id = 1 FORMAT Values") == "(2)"
)
def test_alter_table_columns(cluster):
create_table(cluster, "hdfs_test")
node = cluster.instances["node"]
fs = HdfsClient(hosts=cluster.hdfs_ip)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-03", 4096))
)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(
generate_values("2020-01-03", 4096, -1)
)
)
node.query("ALTER TABLE hdfs_test ADD COLUMN col1 UInt64 DEFAULT 1")
# To ensure parts have merged
node.query("OPTIMIZE TABLE hdfs_test")
assert node.query("SELECT sum(col1) FROM hdfs_test FORMAT Values") == "(8192)"
assert (
node.query("SELECT sum(col1) FROM hdfs_test WHERE id > 0 FORMAT Values")
== "(4096)"
)
wait_for_delete_hdfs_objects(
cluster,
FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE + FILES_OVERHEAD_PER_COLUMN,
)
node.query(
"ALTER TABLE hdfs_test MODIFY COLUMN col1 String",
settings={"mutations_sync": 2},
)
assert node.query("SELECT distinct(col1) FROM hdfs_test FORMAT Values") == "('1')"
# and file with mutation
wait_for_delete_hdfs_objects(
cluster,
FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE + FILES_OVERHEAD_PER_COLUMN + 1,
)
node.query("ALTER TABLE hdfs_test DROP COLUMN col1", settings={"mutations_sync": 2})
# and 2 files with mutations
wait_for_delete_hdfs_objects(
cluster, FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE + 2
)
def test_attach_detach_partition(cluster):
create_table(cluster, "hdfs_test")
node = cluster.instances["node"]
fs = HdfsClient(hosts=cluster.hdfs_ip)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-03", 4096))
)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-04", 4096))
)
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(8192)"
hdfs_objects = fs.listdir("/clickhouse")
assert len(hdfs_objects) == FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE * 2
node.query("ALTER TABLE hdfs_test DETACH PARTITION '2020-01-03'")
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(4096)"
wait_for_delete_empty_parts(node, "hdfs_test")
wait_for_delete_inactive_parts(node, "hdfs_test")
wait_for_delete_hdfs_objects(
cluster,
FILES_OVERHEAD
+ FILES_OVERHEAD_PER_PART_WIDE * 2
- FILES_OVERHEAD_METADATA_VERSION,
)
node.query("ALTER TABLE hdfs_test ATTACH PARTITION '2020-01-03'")
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(8192)"
hdfs_objects = fs.listdir("/clickhouse")
assert len(hdfs_objects) == FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE * 2
node.query("ALTER TABLE hdfs_test DROP PARTITION '2020-01-03'")
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(4096)"
wait_for_delete_empty_parts(node, "hdfs_test")
wait_for_delete_inactive_parts(node, "hdfs_test")
wait_for_delete_hdfs_objects(cluster, FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE)
node.query("ALTER TABLE hdfs_test DETACH PARTITION '2020-01-04'")
node.query(
"ALTER TABLE hdfs_test DROP DETACHED PARTITION '2020-01-04'",
settings={"allow_drop_detached": 1},
)
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(0)"
wait_for_delete_empty_parts(node, "hdfs_test")
wait_for_delete_inactive_parts(node, "hdfs_test")
wait_for_delete_hdfs_objects(cluster, FILES_OVERHEAD)
def test_move_partition_to_another_disk(cluster):
create_table(cluster, "hdfs_test")
node = cluster.instances["node"]
fs = HdfsClient(hosts=cluster.hdfs_ip)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-03", 4096))
)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-04", 4096))
)
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(8192)"
hdfs_objects = fs.listdir("/clickhouse")
assert len(hdfs_objects) == FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE * 2
node.query("ALTER TABLE hdfs_test MOVE PARTITION '2020-01-04' TO DISK 'hdd'")
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(8192)"
hdfs_objects = fs.listdir("/clickhouse")
assert len(hdfs_objects) == FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE
node.query("ALTER TABLE hdfs_test MOVE PARTITION '2020-01-04' TO DISK 'hdfs'")
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(8192)"
hdfs_objects = fs.listdir("/clickhouse")
assert len(hdfs_objects) == FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE * 2
def test_table_manipulations(cluster):
create_table(cluster, "hdfs_test")
node = cluster.instances["node"]
fs = HdfsClient(hosts=cluster.hdfs_ip)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-03", 4096))
)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-04", 4096))
)
node.query("RENAME TABLE hdfs_test TO hdfs_renamed")
assert node.query("SELECT count(*) FROM hdfs_renamed FORMAT Values") == "(8192)"
hdfs_objects = fs.listdir("/clickhouse")
assert len(hdfs_objects) == FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE * 2
node.query("RENAME TABLE hdfs_renamed TO hdfs_test")
assert node.query("CHECK TABLE hdfs_test FORMAT Values") == "(1)"
node.query("DETACH TABLE hdfs_test")
node.query("ATTACH TABLE hdfs_test")
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(8192)"
hdfs_objects = fs.listdir("/clickhouse")
assert len(hdfs_objects) == FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE * 2
node.query("TRUNCATE TABLE hdfs_test")
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(0)"
wait_for_delete_empty_parts(node, "hdfs_test")
wait_for_delete_inactive_parts(node, "hdfs_test")
wait_for_delete_hdfs_objects(cluster, FILES_OVERHEAD)
def test_move_replace_partition_to_another_table(cluster):
create_table(cluster, "hdfs_test")
node = cluster.instances["node"]
fs = HdfsClient(hosts=cluster.hdfs_ip)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-03", 4096))
)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-04", 4096))
)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(
generate_values("2020-01-05", 4096, -1)
)
)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(
generate_values("2020-01-06", 4096, -1)
)
)
assert node.query("SELECT sum(id) FROM hdfs_test FORMAT Values") == "(0)"
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(16384)"
hdfs_objects = fs.listdir("/clickhouse")
assert len(hdfs_objects) == FILES_OVERHEAD + FILES_OVERHEAD_PER_PART_WIDE * 4
create_table(cluster, "hdfs_clone")
node.query("ALTER TABLE hdfs_test MOVE PARTITION '2020-01-03' TO TABLE hdfs_clone")
node.query("ALTER TABLE hdfs_test MOVE PARTITION '2020-01-05' TO TABLE hdfs_clone")
assert node.query("SELECT sum(id) FROM hdfs_test FORMAT Values") == "(0)"
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(8192)"
assert node.query("SELECT sum(id) FROM hdfs_clone FORMAT Values") == "(0)"
assert node.query("SELECT count(*) FROM hdfs_clone FORMAT Values") == "(8192)"
# Number of objects in HDFS should be unchanged.
hdfs_objects = fs.listdir("/clickhouse")
for obj in hdfs_objects:
print("Object in HDFS after move", obj)
wait_for_delete_hdfs_objects(
cluster,
FILES_OVERHEAD * 2
+ FILES_OVERHEAD_PER_PART_WIDE * 4
- FILES_OVERHEAD_METADATA_VERSION * 2,
)
# Add new partitions to source table, but with different values and replace them from copied table.
node.query(
"INSERT INTO hdfs_test VALUES {}".format(
generate_values("2020-01-03", 4096, -1)
)
)
node.query(
"INSERT INTO hdfs_test VALUES {}".format(generate_values("2020-01-05", 4096))
)
assert node.query("SELECT sum(id) FROM hdfs_test FORMAT Values") == "(0)"
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(16384)"
hdfs_objects = fs.listdir("/clickhouse")
for obj in hdfs_objects:
print("Object in HDFS after insert", obj)
wait_for_delete_hdfs_objects(
cluster,
FILES_OVERHEAD * 2
+ FILES_OVERHEAD_PER_PART_WIDE * 6
- FILES_OVERHEAD_METADATA_VERSION * 2,
)
node.query("ALTER TABLE hdfs_test REPLACE PARTITION '2020-01-03' FROM hdfs_clone")
node.query("ALTER TABLE hdfs_test REPLACE PARTITION '2020-01-05' FROM hdfs_clone")
assert node.query("SELECT sum(id) FROM hdfs_test FORMAT Values") == "(0)"
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(16384)"
assert node.query("SELECT sum(id) FROM hdfs_clone FORMAT Values") == "(0)"
assert node.query("SELECT count(*) FROM hdfs_clone FORMAT Values") == "(8192)"
# Wait for outdated partitions deletion.
wait_for_delete_hdfs_objects(
cluster,
FILES_OVERHEAD * 2
+ FILES_OVERHEAD_PER_PART_WIDE * 4
- FILES_OVERHEAD_METADATA_VERSION * 2,
)
node.query("DROP TABLE hdfs_clone SYNC")
assert node.query("SELECT sum(id) FROM hdfs_test FORMAT Values") == "(0)"
assert node.query("SELECT count(*) FROM hdfs_test FORMAT Values") == "(16384)"
# Data should remain in hdfs
hdfs_objects = fs.listdir("/clickhouse")
for obj in hdfs_objects:
print("Object in HDFS after drop", obj)
wait_for_delete_hdfs_objects(
cluster,
FILES_OVERHEAD
+ FILES_OVERHEAD_PER_PART_WIDE * 4
- FILES_OVERHEAD_METADATA_VERSION * 2,
)