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1142 lines
38 KiB
C++
1142 lines
38 KiB
C++
#include <Storages/StorageLog.h>
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#include <Storages/StorageFactory.h>
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#include <Common/Exception.h>
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#include <Common/StringUtils/StringUtils.h>
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#include <Common/typeid_cast.h>
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#include <Interpreters/evaluateConstantExpression.h>
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#include <IO/LimitReadBuffer.h>
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#include <IO/ReadBufferFromFileBase.h>
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#include <IO/ReadHelpers.h>
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#include <IO/WriteBufferFromFileBase.h>
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#include <IO/WriteHelpers.h>
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#include <IO/copyData.h>
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#include <Compression/CompressedReadBuffer.h>
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#include <Compression/CompressedWriteBuffer.h>
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#include <DataTypes/NestedUtils.h>
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#include <Interpreters/Context.h>
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#include "StorageLogSettings.h"
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#include <Processors/Sources/NullSource.h>
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#include <Processors/Sources/SourceWithProgress.h>
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#include <QueryPipeline/Pipe.h>
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#include <Processors/Sinks/SinkToStorage.h>
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#include <Backups/BackupEntryFromAppendOnlyFile.h>
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#include <Backups/BackupEntryFromSmallFile.h>
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#include <Backups/IBackup.h>
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#include <Backups/IRestoreTask.h>
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#include <Disks/TemporaryFileOnDisk.h>
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#include <cassert>
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#include <chrono>
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#define DBMS_STORAGE_LOG_DATA_FILE_EXTENSION ".bin"
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#define DBMS_STORAGE_LOG_MARKS_FILE_NAME "__marks.mrk"
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namespace DB
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{
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namespace ErrorCodes
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{
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extern const int TIMEOUT_EXCEEDED;
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extern const int LOGICAL_ERROR;
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extern const int DUPLICATE_COLUMN;
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extern const int SIZES_OF_MARKS_FILES_ARE_INCONSISTENT;
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extern const int NUMBER_OF_ARGUMENTS_DOESNT_MATCH;
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extern const int INCORRECT_FILE_NAME;
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extern const int NOT_IMPLEMENTED;
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}
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/// NOTE: The lock `StorageLog::rwlock` is NOT kept locked while reading,
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/// because we read ranges of data that do not change.
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class LogSource final : public SourceWithProgress
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{
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public:
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static Block getHeader(const NamesAndTypesList & columns)
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{
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Block res;
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for (const auto & name_type : columns)
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res.insert({ name_type.type->createColumn(), name_type.type, name_type.name });
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return res;
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}
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LogSource(
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size_t block_size_,
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const NamesAndTypesList & columns_,
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const StorageLog & storage_,
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size_t rows_limit_,
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const std::vector<size_t> & offsets_,
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const std::vector<size_t> & file_sizes_,
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bool limited_by_file_sizes_,
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ReadSettings read_settings_)
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: SourceWithProgress(getHeader(columns_))
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, block_size(block_size_)
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, columns(columns_)
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, storage(storage_)
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, rows_limit(rows_limit_)
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, offsets(offsets_)
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, file_sizes(file_sizes_)
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, limited_by_file_sizes(limited_by_file_sizes_)
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, read_settings(std::move(read_settings_))
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{
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}
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String getName() const override { return "Log"; }
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protected:
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Chunk generate() override;
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private:
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const size_t block_size;
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const NamesAndTypesList columns;
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const StorageLog & storage;
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const size_t rows_limit; /// The maximum number of rows that can be read
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size_t rows_read = 0;
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bool is_finished = false;
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const std::vector<size_t> offsets;
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const std::vector<size_t> file_sizes;
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const bool limited_by_file_sizes;
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const ReadSettings read_settings;
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struct Stream
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{
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Stream(const DiskPtr & disk, const String & data_path, size_t offset, size_t file_size, bool limited_by_file_size, ReadSettings read_settings_)
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{
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plain = disk->readFile(data_path, read_settings_.adjustBufferSize(file_size));
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if (offset)
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plain->seek(offset, SEEK_SET);
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if (limited_by_file_size)
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{
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limited.emplace(*plain, file_size - offset, false);
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compressed.emplace(*limited);
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}
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else
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compressed.emplace(*plain);
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}
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std::unique_ptr<ReadBufferFromFileBase> plain;
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std::optional<LimitReadBuffer> limited;
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std::optional<CompressedReadBuffer> compressed;
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};
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using FileStreams = std::map<String, Stream>;
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FileStreams streams;
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using DeserializeState = ISerialization::DeserializeBinaryBulkStatePtr;
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using DeserializeStates = std::map<String, DeserializeState>;
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DeserializeStates deserialize_states;
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void readData(const NameAndTypePair & name_and_type, ColumnPtr & column, size_t max_rows_to_read, ISerialization::SubstreamsCache & cache);
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bool isFinished();
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};
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Chunk LogSource::generate()
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{
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if (isFinished())
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{
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/// Close the files (before destroying the object).
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/// When many sources are created, but simultaneously reading only a few of them,
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/// buffers don't waste memory.
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streams.clear();
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return {};
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}
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/// How many rows to read for the next block.
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size_t max_rows_to_read = std::min(block_size, rows_limit - rows_read);
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std::unordered_map<String, ISerialization::SubstreamsCache> caches;
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Block res;
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for (const auto & name_type : columns)
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{
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ColumnPtr column;
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try
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{
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column = name_type.type->createColumn();
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readData(name_type, column, max_rows_to_read, caches[name_type.getNameInStorage()]);
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}
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catch (Exception & e)
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{
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e.addMessage("while reading column " + name_type.name + " at " + fullPath(storage.disk, storage.table_path));
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throw;
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}
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if (!column->empty())
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res.insert(ColumnWithTypeAndName(column, name_type.type, name_type.name));
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}
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if (res)
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rows_read += res.rows();
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if (!res)
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is_finished = true;
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if (isFinished())
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{
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/// Close the files (before destroying the object).
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/// When many sources are created, but simultaneously reading only a few of them,
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/// buffers don't waste memory.
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streams.clear();
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}
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UInt64 num_rows = res.rows();
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return Chunk(res.getColumns(), num_rows);
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}
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void LogSource::readData(const NameAndTypePair & name_and_type, ColumnPtr & column,
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size_t max_rows_to_read, ISerialization::SubstreamsCache & cache)
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{
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ISerialization::DeserializeBinaryBulkSettings settings; /// TODO Use avg_value_size_hint.
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const auto & [name, type] = name_and_type;
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auto serialization = IDataType::getSerialization(name_and_type);
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auto create_stream_getter = [&](bool stream_for_prefix)
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{
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return [&, stream_for_prefix] (const ISerialization::SubstreamPath & path) -> ReadBuffer * //-V1047
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{
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if (cache.contains(ISerialization::getSubcolumnNameForStream(path)))
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return nullptr;
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String data_file_name = ISerialization::getFileNameForStream(name_and_type, path);
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const auto & data_file_it = storage.data_files_by_names.find(data_file_name);
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if (data_file_it == storage.data_files_by_names.end())
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throw Exception("Logical error: no information about file " + data_file_name + " in StorageLog", ErrorCodes::LOGICAL_ERROR);
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const auto & data_file = *data_file_it->second;
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size_t offset = stream_for_prefix ? 0 : offsets[data_file.index];
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size_t file_size = file_sizes[data_file.index];
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auto it = streams.try_emplace(data_file_name, storage.disk, data_file.path, offset, file_size, limited_by_file_sizes, read_settings).first;
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return &it->second.compressed.value();
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};
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};
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if (!deserialize_states.contains(name))
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{
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settings.getter = create_stream_getter(true);
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serialization->deserializeBinaryBulkStatePrefix(settings, deserialize_states[name]);
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}
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settings.getter = create_stream_getter(false);
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serialization->deserializeBinaryBulkWithMultipleStreams(column, max_rows_to_read, settings, deserialize_states[name], &cache);
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}
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bool LogSource::isFinished()
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{
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if (is_finished)
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return true;
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/// Check for row limit.
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if (rows_read == rows_limit)
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{
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is_finished = true;
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return true;
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}
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if (limited_by_file_sizes)
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{
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/// Check for EOF.
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if (!streams.empty() && streams.begin()->second.compressed->eof())
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{
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is_finished = true;
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return true;
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}
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}
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return false;
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}
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/// NOTE: The lock `StorageLog::rwlock` is kept locked in exclusive mode while writing.
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class LogSink final : public SinkToStorage
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{
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public:
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using WriteLock = std::unique_lock<std::shared_timed_mutex>;
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explicit LogSink(
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StorageLog & storage_, const StorageMetadataPtr & metadata_snapshot_, WriteLock && lock_)
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: SinkToStorage(metadata_snapshot_->getSampleBlock())
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, storage(storage_)
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, metadata_snapshot(metadata_snapshot_)
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, lock(std::move(lock_))
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{
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if (!lock)
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throw Exception("Lock timeout exceeded", ErrorCodes::TIMEOUT_EXCEEDED);
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/// Ensure that marks are loaded because we're going to update them.
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storage.loadMarks(lock);
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/// If there were no files, save zero file sizes to be able to rollback in case of error.
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storage.saveFileSizes(lock);
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}
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String getName() const override { return "LogSink"; }
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~LogSink() override
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{
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try
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{
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if (!done)
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{
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/// Rollback partial writes.
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/// No more writing.
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streams.clear();
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/// Truncate files to the older sizes.
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storage.file_checker.repair();
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/// Remove excessive marks.
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storage.removeUnsavedMarks(lock);
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}
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}
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catch (...)
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{
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tryLogCurrentException(__PRETTY_FUNCTION__);
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}
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}
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void consume(Chunk chunk) override;
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void onFinish() override;
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private:
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StorageLog & storage;
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StorageMetadataPtr metadata_snapshot;
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WriteLock lock;
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bool done = false;
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struct Stream
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{
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Stream(const DiskPtr & disk, const String & data_path, size_t initial_data_size, CompressionCodecPtr codec, size_t max_compress_block_size) :
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plain(disk->writeFile(data_path, max_compress_block_size, WriteMode::Append)),
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compressed(*plain, std::move(codec), max_compress_block_size),
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plain_offset(initial_data_size)
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{
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}
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std::unique_ptr<WriteBuffer> plain;
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CompressedWriteBuffer compressed;
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/// How many bytes were in the file at the time the Stream was created.
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size_t plain_offset;
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/// Used to not write shared offsets of columns for nested structures multiple times.
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bool written = false;
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void finalize()
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{
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compressed.next();
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plain->next();
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}
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};
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using FileStreams = std::map<String, Stream>;
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FileStreams streams;
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using SerializeState = ISerialization::SerializeBinaryBulkStatePtr;
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using SerializeStates = std::map<String, SerializeState>;
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SerializeStates serialize_states;
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ISerialization::OutputStreamGetter createStreamGetter(const NameAndTypePair & name_and_type);
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void writeData(const NameAndTypePair & name_and_type, const IColumn & column);
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};
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void LogSink::consume(Chunk chunk)
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{
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auto block = getHeader().cloneWithColumns(chunk.detachColumns());
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metadata_snapshot->check(block, true);
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for (auto & stream : streams | boost::adaptors::map_values)
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stream.written = false;
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for (size_t i = 0; i < block.columns(); ++i)
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{
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const ColumnWithTypeAndName & column = block.safeGetByPosition(i);
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writeData(NameAndTypePair(column.name, column.type), *column.column);
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}
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}
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void LogSink::onFinish()
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{
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if (done)
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return;
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for (auto & stream : streams | boost::adaptors::map_values)
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stream.written = false;
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ISerialization::SerializeBinaryBulkSettings settings;
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for (const auto & column : getHeader())
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{
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auto it = serialize_states.find(column.name);
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if (it != serialize_states.end())
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{
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settings.getter = createStreamGetter(NameAndTypePair(column.name, column.type));
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auto serialization = column.type->getDefaultSerialization();
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serialization->serializeBinaryBulkStateSuffix(settings, it->second);
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}
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}
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/// Finish write.
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for (auto & stream : streams | boost::adaptors::map_values)
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stream.finalize();
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streams.clear();
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storage.saveMarks(lock);
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storage.saveFileSizes(lock);
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storage.updateTotalRows(lock);
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done = true;
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/// unlock should be done from the same thread as lock, and dtor may be
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/// called from different thread, so it should be done here (at least in
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/// case of no exceptions occurred)
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lock.unlock();
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}
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ISerialization::OutputStreamGetter LogSink::createStreamGetter(const NameAndTypePair & name_and_type)
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{
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return [&] (const ISerialization::SubstreamPath & path) -> WriteBuffer *
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{
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String data_file_name = ISerialization::getFileNameForStream(name_and_type, path);
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auto it = streams.find(data_file_name);
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if (it == streams.end())
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throw Exception("Logical error: stream was not created when writing data in LogSink",
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ErrorCodes::LOGICAL_ERROR);
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Stream & stream = it->second;
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if (stream.written)
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return nullptr;
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return &stream.compressed;
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};
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}
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void LogSink::writeData(const NameAndTypePair & name_and_type, const IColumn & column)
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{
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ISerialization::SerializeBinaryBulkSettings settings;
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const auto & [name, type] = name_and_type;
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auto serialization = type->getDefaultSerialization();
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serialization->enumerateStreams([&] (const ISerialization::SubstreamPath & path)
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{
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String data_file_name = ISerialization::getFileNameForStream(name_and_type, path);
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auto it = streams.find(data_file_name);
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if (it == streams.end())
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{
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const auto & data_file_it = storage.data_files_by_names.find(data_file_name);
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if (data_file_it == storage.data_files_by_names.end())
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throw Exception("Logical error: no information about file " + data_file_name + " in StorageLog", ErrorCodes::LOGICAL_ERROR);
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const auto & data_file = *data_file_it->second;
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const auto & columns = metadata_snapshot->getColumns();
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it = streams.try_emplace(data_file.name, storage.disk, data_file.path,
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storage.file_checker.getFileSize(data_file.path),
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columns.getCodecOrDefault(name_and_type.name),
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storage.max_compress_block_size).first;
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}
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auto & stream = it->second;
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if (stream.written)
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return;
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});
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settings.getter = createStreamGetter(name_and_type);
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if (!serialize_states.contains(name))
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serialization->serializeBinaryBulkStatePrefix(settings, serialize_states[name]);
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if (storage.use_marks_file)
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{
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serialization->enumerateStreams([&] (const ISerialization::SubstreamPath & path)
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{
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String data_file_name = ISerialization::getFileNameForStream(name_and_type, path);
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const auto & stream = streams.at(data_file_name);
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if (stream.written)
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return;
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auto & data_file = *storage.data_files_by_names.at(data_file_name);
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auto & marks = data_file.marks;
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size_t prev_num_rows = marks.empty() ? 0 : marks.back().rows;
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auto & mark = marks.emplace_back();
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mark.rows = prev_num_rows + column.size();
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mark.offset = stream.plain_offset + stream.plain->count();
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});
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}
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serialization->serializeBinaryBulkWithMultipleStreams(column, 0, 0, settings, serialize_states[name]);
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serialization->enumerateStreams([&] (const ISerialization::SubstreamPath & path)
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{
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String data_file_name = ISerialization::getFileNameForStream(name_and_type, path);
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auto & stream = streams.at(data_file_name);
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if (stream.written)
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return;
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stream.written = true;
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stream.compressed.next();
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});
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}
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void StorageLog::Mark::write(WriteBuffer & out) const
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{
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writeIntBinary(rows, out);
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writeIntBinary(offset, out);
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}
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void StorageLog::Mark::read(ReadBuffer & in)
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{
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readIntBinary(rows, in);
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readIntBinary(offset, in);
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}
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namespace
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{
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/// NOTE: We extract the number of rows from the marks.
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/// For normal columns, the number of rows in the block is specified in the marks.
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/// For array columns and nested structures, there are more than one group of marks that correspond to different files
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/// - for elements (file name.bin) - the total number of array elements in the block is specified,
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/// - for array sizes (file name.size0.bin) - the number of rows (the whole arrays themselves) in the block is specified.
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/// So for Array data type, first stream is array sizes; and number of array sizes is the number of arrays.
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/// Thus we assume we can always get the real number of rows from the first column.
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constexpr size_t INDEX_WITH_REAL_ROW_COUNT = 0;
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}
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StorageLog::~StorageLog() = default;
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StorageLog::StorageLog(
|
|
const String & engine_name_,
|
|
DiskPtr disk_,
|
|
const String & relative_path_,
|
|
const StorageID & table_id_,
|
|
const ColumnsDescription & columns_,
|
|
const ConstraintsDescription & constraints_,
|
|
const String & comment,
|
|
bool attach,
|
|
size_t max_compress_block_size_)
|
|
: IStorage(table_id_)
|
|
, engine_name(engine_name_)
|
|
, disk(std::move(disk_))
|
|
, table_path(relative_path_)
|
|
, use_marks_file(engine_name == "Log")
|
|
, marks_file_path(table_path + DBMS_STORAGE_LOG_MARKS_FILE_NAME)
|
|
, file_checker(disk, table_path + "sizes.json")
|
|
, max_compress_block_size(max_compress_block_size_)
|
|
{
|
|
StorageInMemoryMetadata storage_metadata;
|
|
storage_metadata.setColumns(columns_);
|
|
storage_metadata.setConstraints(constraints_);
|
|
storage_metadata.setComment(comment);
|
|
setInMemoryMetadata(storage_metadata);
|
|
|
|
if (relative_path_.empty())
|
|
throw Exception("Storage " + getName() + " requires data path", ErrorCodes::INCORRECT_FILE_NAME);
|
|
|
|
/// Enumerate data files.
|
|
for (const auto & column : storage_metadata.getColumns().getAllPhysical())
|
|
addDataFiles(column);
|
|
|
|
/// Ensure the file checker is initialized.
|
|
if (file_checker.empty())
|
|
{
|
|
for (const auto & data_file : data_files)
|
|
file_checker.setEmpty(data_file.path);
|
|
if (use_marks_file)
|
|
file_checker.setEmpty(marks_file_path);
|
|
}
|
|
|
|
if (!attach)
|
|
{
|
|
/// create directories if they do not exist
|
|
disk->createDirectories(table_path);
|
|
}
|
|
else
|
|
{
|
|
try
|
|
{
|
|
file_checker.repair();
|
|
}
|
|
catch (...)
|
|
{
|
|
tryLogCurrentException(__PRETTY_FUNCTION__);
|
|
}
|
|
}
|
|
|
|
total_bytes = file_checker.getTotalSize();
|
|
}
|
|
|
|
|
|
void StorageLog::addDataFiles(const NameAndTypePair & column)
|
|
{
|
|
if (data_files_by_names.contains(column.name))
|
|
throw Exception("Duplicate column with name " + column.name + " in constructor of StorageLog.",
|
|
ErrorCodes::DUPLICATE_COLUMN);
|
|
|
|
ISerialization::StreamCallback stream_callback = [&] (const ISerialization::SubstreamPath & substream_path)
|
|
{
|
|
String data_file_name = ISerialization::getFileNameForStream(column, substream_path);
|
|
if (!data_files_by_names.contains(data_file_name))
|
|
{
|
|
DataFile & data_file = data_files.emplace_back();
|
|
data_file.name = data_file_name;
|
|
data_file.path = table_path + data_file_name + DBMS_STORAGE_LOG_DATA_FILE_EXTENSION;
|
|
data_file.index = num_data_files++;
|
|
data_files_by_names.emplace(data_file_name, nullptr);
|
|
}
|
|
};
|
|
|
|
column.type->getDefaultSerialization()->enumerateStreams(stream_callback);
|
|
|
|
for (auto & data_file : data_files)
|
|
data_files_by_names[data_file.name] = &data_file;
|
|
}
|
|
|
|
|
|
void StorageLog::loadMarks(std::chrono::seconds lock_timeout)
|
|
{
|
|
if (!use_marks_file || marks_loaded)
|
|
return;
|
|
|
|
/// We load marks with an exclusive lock (i.e. the write lock) because we don't want
|
|
/// a data race between two threads trying to load marks simultaneously.
|
|
WriteLock lock{rwlock, lock_timeout};
|
|
if (!lock)
|
|
throw Exception("Lock timeout exceeded", ErrorCodes::TIMEOUT_EXCEEDED);
|
|
|
|
loadMarks(lock);
|
|
}
|
|
|
|
void StorageLog::loadMarks(const WriteLock & lock /* already locked exclusively */)
|
|
{
|
|
if (!use_marks_file || marks_loaded)
|
|
return;
|
|
|
|
size_t num_marks = 0;
|
|
if (disk->exists(marks_file_path))
|
|
{
|
|
size_t file_size = disk->getFileSize(marks_file_path);
|
|
if (file_size % (num_data_files * sizeof(Mark)) != 0)
|
|
throw Exception("Size of marks file is inconsistent", ErrorCodes::SIZES_OF_MARKS_FILES_ARE_INCONSISTENT);
|
|
|
|
num_marks = file_size / (num_data_files * sizeof(Mark));
|
|
|
|
for (auto & data_file : data_files)
|
|
data_file.marks.resize(num_marks);
|
|
|
|
std::unique_ptr<ReadBuffer> marks_rb = disk->readFile(marks_file_path, ReadSettings().adjustBufferSize(32768));
|
|
for (size_t i = 0; i != num_marks; ++i)
|
|
{
|
|
for (auto & data_file : data_files)
|
|
{
|
|
Mark mark;
|
|
mark.read(*marks_rb);
|
|
data_file.marks[i] = mark;
|
|
}
|
|
}
|
|
}
|
|
|
|
marks_loaded = true;
|
|
num_marks_saved = num_marks;
|
|
|
|
/// We need marks to calculate the number of rows, and now we have the marks.
|
|
updateTotalRows(lock);
|
|
}
|
|
|
|
void StorageLog::saveMarks(const WriteLock & /* already locked for writing */)
|
|
{
|
|
if (!use_marks_file)
|
|
return;
|
|
|
|
size_t num_marks = num_data_files ? data_files[0].marks.size() : 0;
|
|
if (num_marks_saved == num_marks)
|
|
return;
|
|
|
|
for (const auto & data_file : data_files)
|
|
{
|
|
if (data_file.marks.size() != num_marks)
|
|
throw Exception("Wrong number of marks generated from block. Makes no sense.", ErrorCodes::LOGICAL_ERROR);
|
|
}
|
|
|
|
size_t start = num_marks_saved;
|
|
auto marks_stream = disk->writeFile(marks_file_path, 4096, WriteMode::Append);
|
|
|
|
for (size_t i = start; i != num_marks; ++i)
|
|
{
|
|
for (const auto & data_file : data_files)
|
|
{
|
|
const auto & mark = data_file.marks[i];
|
|
mark.write(*marks_stream);
|
|
}
|
|
}
|
|
|
|
marks_stream->next();
|
|
marks_stream->finalize();
|
|
|
|
num_marks_saved = num_marks;
|
|
}
|
|
|
|
|
|
void StorageLog::removeUnsavedMarks(const WriteLock & /* already locked for writing */)
|
|
{
|
|
if (!use_marks_file)
|
|
return;
|
|
|
|
for (auto & data_file : data_files)
|
|
{
|
|
if (data_file.marks.size() > num_marks_saved)
|
|
data_file.marks.resize(num_marks_saved);
|
|
}
|
|
}
|
|
|
|
|
|
void StorageLog::saveFileSizes(const WriteLock & /* already locked for writing */)
|
|
{
|
|
for (const auto & data_file : data_files)
|
|
file_checker.update(data_file.path);
|
|
|
|
if (use_marks_file)
|
|
file_checker.update(marks_file_path);
|
|
|
|
file_checker.save();
|
|
total_bytes = file_checker.getTotalSize();
|
|
}
|
|
|
|
|
|
void StorageLog::rename(const String & new_path_to_table_data, const StorageID & new_table_id)
|
|
{
|
|
assert(table_path != new_path_to_table_data);
|
|
{
|
|
disk->moveDirectory(table_path, new_path_to_table_data);
|
|
|
|
table_path = new_path_to_table_data;
|
|
file_checker.setPath(table_path + "sizes.json");
|
|
|
|
for (auto & data_file : data_files)
|
|
data_file.path = table_path + fileName(data_file.path);
|
|
|
|
marks_file_path = table_path + DBMS_STORAGE_LOG_MARKS_FILE_NAME;
|
|
}
|
|
renameInMemory(new_table_id);
|
|
}
|
|
|
|
static std::chrono::seconds getLockTimeout(ContextPtr context)
|
|
{
|
|
const Settings & settings = context->getSettingsRef();
|
|
Int64 lock_timeout = settings.lock_acquire_timeout.totalSeconds();
|
|
if (settings.max_execution_time.totalSeconds() != 0 && settings.max_execution_time.totalSeconds() < lock_timeout)
|
|
lock_timeout = settings.max_execution_time.totalSeconds();
|
|
return std::chrono::seconds{lock_timeout};
|
|
}
|
|
|
|
void StorageLog::truncate(const ASTPtr &, const StorageMetadataPtr &, ContextPtr context, TableExclusiveLockHolder &)
|
|
{
|
|
WriteLock lock{rwlock, getLockTimeout(context)};
|
|
if (!lock)
|
|
throw Exception("Lock timeout exceeded", ErrorCodes::TIMEOUT_EXCEEDED);
|
|
|
|
disk->clearDirectory(table_path);
|
|
|
|
for (auto & data_file : data_files)
|
|
{
|
|
data_file.marks.clear();
|
|
file_checker.setEmpty(data_file.path);
|
|
}
|
|
|
|
if (use_marks_file)
|
|
file_checker.setEmpty(marks_file_path);
|
|
|
|
marks_loaded = true;
|
|
num_marks_saved = 0;
|
|
}
|
|
|
|
|
|
Pipe StorageLog::read(
|
|
const Names & column_names,
|
|
const StorageSnapshotPtr & storage_snapshot,
|
|
SelectQueryInfo & /*query_info*/,
|
|
ContextPtr context,
|
|
QueryProcessingStage::Enum /*processed_stage*/,
|
|
size_t max_block_size,
|
|
unsigned num_streams)
|
|
{
|
|
storage_snapshot->check(column_names);
|
|
|
|
auto lock_timeout = getLockTimeout(context);
|
|
loadMarks(lock_timeout);
|
|
|
|
ReadLock lock{rwlock, lock_timeout};
|
|
if (!lock)
|
|
throw Exception("Lock timeout exceeded", ErrorCodes::TIMEOUT_EXCEEDED);
|
|
|
|
if (!num_data_files || !file_checker.getFileSize(data_files[INDEX_WITH_REAL_ROW_COUNT].path))
|
|
return Pipe(std::make_shared<NullSource>(storage_snapshot->getSampleBlockForColumns(column_names)));
|
|
|
|
const Marks & marks_with_real_row_count = data_files[INDEX_WITH_REAL_ROW_COUNT].marks;
|
|
size_t num_marks = marks_with_real_row_count.size();
|
|
|
|
size_t max_streams = use_marks_file ? num_marks : 1;
|
|
if (num_streams > max_streams)
|
|
num_streams = max_streams;
|
|
|
|
auto options = GetColumnsOptions(GetColumnsOptions::All).withSubcolumns();
|
|
auto all_columns = storage_snapshot->getColumnsByNames(options, column_names);
|
|
all_columns = Nested::convertToSubcolumns(all_columns);
|
|
|
|
std::vector<size_t> offsets;
|
|
offsets.resize(num_data_files, 0);
|
|
|
|
std::vector<size_t> file_sizes;
|
|
file_sizes.resize(num_data_files, 0);
|
|
for (const auto & data_file : data_files)
|
|
file_sizes[data_file.index] = file_checker.getFileSize(data_file.path);
|
|
|
|
/// For TinyLog (use_marks_file == false) there is no row limit and we just read
|
|
/// the data files up to their sizes.
|
|
bool limited_by_file_sizes = !use_marks_file;
|
|
size_t row_limit = std::numeric_limits<size_t>::max();
|
|
|
|
ReadSettings read_settings = context->getReadSettings();
|
|
Pipes pipes;
|
|
|
|
for (size_t stream = 0; stream < num_streams; ++stream)
|
|
{
|
|
if (use_marks_file)
|
|
{
|
|
size_t mark_begin = stream * num_marks / num_streams;
|
|
size_t mark_end = (stream + 1) * num_marks / num_streams;
|
|
size_t start_row = mark_begin ? marks_with_real_row_count[mark_begin - 1].rows : 0;
|
|
size_t end_row = mark_end ? marks_with_real_row_count[mark_end - 1].rows : 0;
|
|
row_limit = end_row - start_row;
|
|
for (const auto & data_file : data_files)
|
|
offsets[data_file.index] = data_file.marks[mark_begin].offset;
|
|
}
|
|
|
|
pipes.emplace_back(std::make_shared<LogSource>(
|
|
max_block_size,
|
|
all_columns,
|
|
*this,
|
|
row_limit,
|
|
offsets,
|
|
file_sizes,
|
|
limited_by_file_sizes,
|
|
read_settings));
|
|
}
|
|
|
|
/// No need to hold lock while reading because we read fixed range of data that does not change while appending more data.
|
|
return Pipe::unitePipes(std::move(pipes));
|
|
}
|
|
|
|
SinkToStoragePtr StorageLog::write(const ASTPtr & /*query*/, const StorageMetadataPtr & metadata_snapshot, ContextPtr context)
|
|
{
|
|
WriteLock lock{rwlock, getLockTimeout(context)};
|
|
if (!lock)
|
|
throw Exception("Lock timeout exceeded", ErrorCodes::TIMEOUT_EXCEEDED);
|
|
|
|
return std::make_shared<LogSink>(*this, metadata_snapshot, std::move(lock));
|
|
}
|
|
|
|
CheckResults StorageLog::checkData(const ASTPtr & /* query */, ContextPtr context)
|
|
{
|
|
ReadLock lock{rwlock, getLockTimeout(context)};
|
|
if (!lock)
|
|
throw Exception("Lock timeout exceeded", ErrorCodes::TIMEOUT_EXCEEDED);
|
|
|
|
return file_checker.check();
|
|
}
|
|
|
|
|
|
IStorage::ColumnSizeByName StorageLog::getColumnSizes() const
|
|
{
|
|
ReadLock lock{rwlock, std::chrono::seconds(DBMS_DEFAULT_LOCK_ACQUIRE_TIMEOUT_SEC)};
|
|
if (!lock)
|
|
throw Exception("Lock timeout exceeded", ErrorCodes::TIMEOUT_EXCEEDED);
|
|
|
|
ColumnSizeByName column_sizes;
|
|
|
|
for (const auto & column : getInMemoryMetadata().getColumns().getAllPhysical())
|
|
{
|
|
ISerialization::StreamCallback stream_callback = [&, this] (const ISerialization::SubstreamPath & substream_path)
|
|
{
|
|
String data_file_name = ISerialization::getFileNameForStream(column, substream_path);
|
|
auto it = data_files_by_names.find(data_file_name);
|
|
if (it != data_files_by_names.end())
|
|
{
|
|
const auto & data_file = *it->second;
|
|
column_sizes[column.name].data_compressed += file_checker.getFileSize(data_file.path);
|
|
}
|
|
};
|
|
|
|
auto serialization = column.type->getDefaultSerialization();
|
|
serialization->enumerateStreams(stream_callback);
|
|
}
|
|
|
|
return column_sizes;
|
|
}
|
|
|
|
void StorageLog::updateTotalRows(const WriteLock &)
|
|
{
|
|
if (!use_marks_file || !marks_loaded)
|
|
return;
|
|
|
|
if (num_data_files)
|
|
total_rows = data_files[INDEX_WITH_REAL_ROW_COUNT].marks.empty() ? 0 : data_files[INDEX_WITH_REAL_ROW_COUNT].marks.back().rows;
|
|
else
|
|
total_rows = 0;
|
|
}
|
|
|
|
std::optional<UInt64> StorageLog::totalRows(const Settings &) const
|
|
{
|
|
if (use_marks_file && marks_loaded)
|
|
return total_rows;
|
|
|
|
if (!total_bytes)
|
|
return 0;
|
|
|
|
return {};
|
|
}
|
|
|
|
std::optional<UInt64> StorageLog::totalBytes(const Settings &) const
|
|
{
|
|
return total_bytes;
|
|
}
|
|
|
|
BackupEntries StorageLog::backupData(ContextPtr context, const ASTs & partitions)
|
|
{
|
|
if (!partitions.empty())
|
|
throw Exception(ErrorCodes::NOT_IMPLEMENTED, "Table engine {} doesn't support partitions", getName());
|
|
|
|
auto lock_timeout = getLockTimeout(context);
|
|
loadMarks(lock_timeout);
|
|
|
|
ReadLock lock{rwlock, lock_timeout};
|
|
if (!lock)
|
|
throw Exception("Lock timeout exceeded", ErrorCodes::TIMEOUT_EXCEEDED);
|
|
|
|
if (!num_data_files || !file_checker.getFileSize(data_files[INDEX_WITH_REAL_ROW_COUNT].path))
|
|
return {};
|
|
|
|
auto temp_dir_owner = std::make_shared<TemporaryFileOnDisk>(disk, "tmp/backup_");
|
|
auto temp_dir = temp_dir_owner->getPath();
|
|
disk->createDirectories(temp_dir);
|
|
|
|
BackupEntries backup_entries;
|
|
|
|
/// *.bin
|
|
for (const auto & data_file : data_files)
|
|
{
|
|
/// We make a copy of the data file because it can be changed later in write() or in truncate().
|
|
String data_file_name = fileName(data_file.path);
|
|
String hardlink_file_path = temp_dir + "/" + data_file_name;
|
|
disk->createHardLink(data_file.path, hardlink_file_path);
|
|
backup_entries.emplace_back(
|
|
data_file_name,
|
|
std::make_unique<BackupEntryFromAppendOnlyFile>(
|
|
disk, hardlink_file_path, file_checker.getFileSize(data_file.path), std::nullopt, temp_dir_owner));
|
|
}
|
|
|
|
/// __marks.mrk
|
|
if (use_marks_file)
|
|
{
|
|
/// We make a copy of the data file because it can be changed later in write() or in truncate().
|
|
String marks_file_name = fileName(marks_file_path);
|
|
String hardlink_file_path = temp_dir + "/" + marks_file_name;
|
|
disk->createHardLink(marks_file_path, hardlink_file_path);
|
|
backup_entries.emplace_back(
|
|
marks_file_name,
|
|
std::make_unique<BackupEntryFromAppendOnlyFile>(
|
|
disk, hardlink_file_path, file_checker.getFileSize(marks_file_path), std::nullopt, temp_dir_owner));
|
|
}
|
|
|
|
/// sizes.json
|
|
String files_info_path = file_checker.getPath();
|
|
backup_entries.emplace_back(fileName(files_info_path), std::make_unique<BackupEntryFromSmallFile>(disk, files_info_path));
|
|
|
|
/// columns.txt
|
|
backup_entries.emplace_back(
|
|
"columns.txt", std::make_unique<BackupEntryFromMemory>(getInMemoryMetadata().getColumns().getAllPhysical().toString()));
|
|
|
|
/// count.txt
|
|
if (use_marks_file)
|
|
{
|
|
size_t num_rows = data_files[INDEX_WITH_REAL_ROW_COUNT].marks.empty() ? 0 : data_files[INDEX_WITH_REAL_ROW_COUNT].marks.back().rows;
|
|
backup_entries.emplace_back("count.txt", std::make_unique<BackupEntryFromMemory>(toString(num_rows)));
|
|
}
|
|
|
|
return backup_entries;
|
|
}
|
|
|
|
class LogRestoreTask : public IRestoreTask
|
|
{
|
|
using WriteLock = StorageLog::WriteLock;
|
|
using Mark = StorageLog::Mark;
|
|
|
|
public:
|
|
LogRestoreTask(
|
|
std::shared_ptr<StorageLog> storage_, const BackupPtr & backup_, const String & data_path_in_backup_, std::chrono::seconds lock_timeout_)
|
|
: storage(storage_), backup(backup_), data_path_in_backup(data_path_in_backup_), lock_timeout(lock_timeout_)
|
|
{
|
|
}
|
|
|
|
RestoreTasks run() override
|
|
{
|
|
WriteLock lock{storage->rwlock, lock_timeout};
|
|
if (!lock)
|
|
throw Exception("Lock timeout exceeded", ErrorCodes::TIMEOUT_EXCEEDED);
|
|
|
|
const auto num_data_files = storage->num_data_files;
|
|
if (!num_data_files)
|
|
return {};
|
|
|
|
auto & file_checker = storage->file_checker;
|
|
|
|
/// Load the marks if not loaded yet. We have to do that now because we're going to update these marks.
|
|
storage->loadMarks(lock);
|
|
|
|
/// If there were no files, save zero file sizes to be able to rollback in case of error.
|
|
storage->saveFileSizes(lock);
|
|
|
|
try
|
|
{
|
|
/// Append data files.
|
|
auto & data_files = storage->data_files;
|
|
for (const auto & data_file : data_files)
|
|
{
|
|
String file_path_in_backup = data_path_in_backup + fileName(data_file.path);
|
|
auto backup_entry = backup->readFile(file_path_in_backup);
|
|
const auto & disk = storage->disk;
|
|
auto in = backup_entry->getReadBuffer();
|
|
auto out = disk->writeFile(data_file.path, storage->max_compress_block_size, WriteMode::Append);
|
|
copyData(*in, *out);
|
|
}
|
|
|
|
const bool use_marks_file = storage->use_marks_file;
|
|
if (use_marks_file)
|
|
{
|
|
/// Append marks.
|
|
size_t num_extra_marks = 0;
|
|
const auto & marks_file_path = storage->marks_file_path;
|
|
String file_path_in_backup = data_path_in_backup + fileName(marks_file_path);
|
|
size_t file_size = backup->getFileSize(file_path_in_backup);
|
|
if (file_size % (num_data_files * sizeof(Mark)) != 0)
|
|
throw Exception("Size of marks file is inconsistent", ErrorCodes::SIZES_OF_MARKS_FILES_ARE_INCONSISTENT);
|
|
|
|
num_extra_marks = file_size / (num_data_files * sizeof(Mark));
|
|
|
|
size_t num_marks = data_files[0].marks.size();
|
|
for (auto & data_file : data_files)
|
|
data_file.marks.reserve(num_marks + num_extra_marks);
|
|
|
|
std::vector<size_t> old_data_sizes;
|
|
std::vector<size_t> old_num_rows;
|
|
old_data_sizes.resize(num_data_files);
|
|
old_num_rows.resize(num_data_files);
|
|
for (size_t i = 0; i != num_data_files; ++i)
|
|
{
|
|
old_data_sizes[i] = file_checker.getFileSize(data_files[i].path);
|
|
old_num_rows[i] = num_marks ? data_files[i].marks[num_marks - 1].rows : 0;
|
|
}
|
|
|
|
auto backup_entry = backup->readFile(file_path_in_backup);
|
|
auto marks_rb = backup_entry->getReadBuffer();
|
|
|
|
for (size_t i = 0; i != num_extra_marks; ++i)
|
|
{
|
|
for (size_t j = 0; j != num_data_files; ++j)
|
|
{
|
|
Mark mark;
|
|
mark.read(*marks_rb);
|
|
mark.rows += old_num_rows[j]; /// Adjust the number of rows.
|
|
mark.offset += old_data_sizes[j]; /// Adjust the offset.
|
|
data_files[j].marks.push_back(mark);
|
|
}
|
|
}
|
|
}
|
|
|
|
/// Finish writing.
|
|
storage->saveMarks(lock);
|
|
storage->saveFileSizes(lock);
|
|
storage->updateTotalRows(lock);
|
|
}
|
|
catch (...)
|
|
{
|
|
/// Rollback partial writes.
|
|
file_checker.repair();
|
|
storage->removeUnsavedMarks(lock);
|
|
throw;
|
|
}
|
|
|
|
return {};
|
|
}
|
|
|
|
private:
|
|
std::shared_ptr<StorageLog> storage;
|
|
BackupPtr backup;
|
|
String data_path_in_backup;
|
|
std::chrono::seconds lock_timeout;
|
|
};
|
|
|
|
RestoreTaskPtr StorageLog::restoreData(ContextMutablePtr context, const ASTs & partitions, const BackupPtr & backup, const String & data_path_in_backup, const StorageRestoreSettings &, const std::shared_ptr<IRestoreCoordination> &)
|
|
{
|
|
if (!partitions.empty())
|
|
throw Exception(ErrorCodes::NOT_IMPLEMENTED, "Table engine {} doesn't support partitions", getName());
|
|
|
|
return std::make_unique<LogRestoreTask>(
|
|
typeid_cast<std::shared_ptr<StorageLog>>(shared_from_this()), backup, data_path_in_backup, getLockTimeout(context));
|
|
}
|
|
|
|
|
|
void registerStorageLog(StorageFactory & factory)
|
|
{
|
|
StorageFactory::StorageFeatures features{
|
|
.supports_settings = true
|
|
};
|
|
|
|
auto create_fn = [](const StorageFactory::Arguments & args)
|
|
{
|
|
if (!args.engine_args.empty())
|
|
throw Exception(
|
|
"Engine " + args.engine_name + " doesn't support any arguments (" + toString(args.engine_args.size()) + " given)",
|
|
ErrorCodes::NUMBER_OF_ARGUMENTS_DOESNT_MATCH);
|
|
|
|
String disk_name = getDiskName(*args.storage_def);
|
|
DiskPtr disk = args.getContext()->getDisk(disk_name);
|
|
|
|
return std::make_shared<StorageLog>(
|
|
args.engine_name,
|
|
disk,
|
|
args.relative_data_path,
|
|
args.table_id,
|
|
args.columns,
|
|
args.constraints,
|
|
args.comment,
|
|
args.attach,
|
|
args.getContext()->getSettings().max_compress_block_size);
|
|
};
|
|
|
|
factory.registerStorage("Log", create_fn, features);
|
|
factory.registerStorage("TinyLog", create_fn, features);
|
|
}
|
|
|
|
}
|